RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 RTL9Q8NET4 1388 aa25.57■■□□□ 1.68
ATN1-204ENST00000541029 TNIP1Q15025 636 aa25.57■■□□□ 1.68
ATN1-204ENST00000541029 USP50Q70EL3 339 aaPredicted RBP25.57■■□□□ 1.68
ATN1-204ENST00000541029 CNTROBQ8N137 903 aa25.57■■□□□ 1.68
ATN1-204ENST00000541029 LINS1Q8NG48 757 aa25.57■■□□□ 1.68
ATN1-204ENST00000541029 ANKIB1Q9P2G1 1089 aa25.57■■□□□ 1.68
ATN1-204ENST00000541029 F6X3S4 739 aa25.56■■□□□ 1.68
ATN1-204ENST00000541029 DOK7Q18PE1 504 aa25.56■■□□□ 1.68
ATN1-204ENST00000541029 CDC5LQ99459 802 aaKnown RBP25.56■■□□□ 1.68
ATN1-204ENST00000541029 BCL2L13Q9BXK5 485 aa25.56■■□□□ 1.68
ATN1-204ENST00000541029 ADARB2Q9NS39 739 aaKnown RBP25.56■■□□□ 1.68
ATN1-204ENST00000541029 ECE2O60344 883 aa25.55■■□□□ 1.68
ATN1-204ENST00000541029 CASP7P55210 303 aa25.55■■□□□ 1.68
ATN1-204ENST00000541029 GGA1Q9UJY5 639 aa25.55■■□□□ 1.68
ATN1-204ENST00000541029 ZNF646O15015 1829 aaPredicted RBP25.55■■□□□ 1.68
ATN1-204ENST00000541029 PSMD14O00487 310 aa25.54■■□□□ 1.68
ATN1-204ENST00000541029 MKRN1Q9UHC7 482 aaKnown RBP25.54■■□□□ 1.68
ATN1-204ENST00000541029 SHTN1A0MZ66 631 aa25.53■■□□□ 1.68
ATN1-204ENST00000541029 PLA2G12BQ9BX93 195 aa25.53■■□□□ 1.68
ATN1-204ENST00000541029 XDHP47989 1333 aa25.53■■□□□ 1.68
ATN1-204ENST00000541029 TMEM88BA6NKF7 163 aa25.52■■□□□ 1.68
ATN1-204ENST00000541029 FAM161AQ3B820 660 aa25.52■■□□□ 1.68
ATN1-204ENST00000541029 KCNQ5Q9NR82 932 aa25.52■■□□□ 1.68
ATN1-204ENST00000541029 ZBTB12Q9Y330 459 aaPredicted RBP25.52■■□□□ 1.68
ATN1-204ENST00000541029 BEND3Q5T5X7 828 aa25.51■■□□□ 1.67
ATN1-204ENST00000541029 ZC3H12CQ9C0D7 883 aaKnown RBP25.51■■□□□ 1.67
ATN1-204ENST00000541029 CNTNAP1P78357 1384 aa25.51■■□□□ 1.67
ATN1-204ENST00000541029 POLR2AP24928 1970 aaKnown RBP25.51■■□□□ 1.67
ATN1-204ENST00000541029 MICALL2Q8IY33 904 aa25.5■■□□□ 1.67
ATN1-204ENST00000541029 TRPM4Q8TD43 1214 aa25.5■■□□□ 1.67
ATN1-204ENST00000541029 FMR1Q06787 632 aaKnown RBP eCLIP25.49■■□□□ 1.67
ATN1-204ENST00000541029 BSDC1Q9NW68 430 aaPredicted RBP25.49■■□□□ 1.67
ATN1-204ENST00000541029 CNOT7Q9UIV1 285 aaKnown RBP25.49■■□□□ 1.67
ATN1-204ENST00000541029 ITGA6P23229 1130 aa25.48■■□□□ 1.67
ATN1-204ENST00000541029 ATP2B4P23634 1241 aa25.48■■□□□ 1.67
ATN1-204ENST00000541029 MINPP1Q9UNW1 487 aa25.48■■□□□ 1.67
ATN1-204ENST00000541029 WTIPA6NIX2 430 aaPredicted RBP25.47■■□□□ 1.67
ATN1-204ENST00000541029 E9PSI1 815 aa25.47■■□□□ 1.67
ATN1-204ENST00000541029 TRAF5O00463 557 aa25.47■■□□□ 1.67
ATN1-204ENST00000541029 IGHMBP2P38935 993 aaKnown RBP25.47■■□□□ 1.67
ATN1-204ENST00000541029 HIRAP54198 1017 aaPredicted RBP25.47■■□□□ 1.67
ATN1-204ENST00000541029 MED23Q9ULK4 1368 aa25.46■■□□□ 1.67
ATN1-204ENST00000541029 G3V3G9 751 aa25.46■■□□□ 1.67
ATN1-204ENST00000541029 CSF1RP07333 972 aa25.46■■□□□ 1.67
ATN1-204ENST00000541029 DCAF8Q5TAQ9 597 aa25.46■■□□□ 1.67
ATN1-204ENST00000541029 DPF2Q92785 391 aa25.46■■□□□ 1.67
ATN1-204ENST00000541029 H7C1D1 291 aa25.45■■□□□ 1.66
ATN1-204ENST00000541029 SLC4A10Q6U841 1118 aa25.45■■□□□ 1.66
ATN1-204ENST00000541029 CCER2I3L3R5 266 aa25.44■■□□□ 1.66
ATN1-204ENST00000541029 RPS12P25398 132 aaKnown RBP25.44■■□□□ 1.66
ATN1-204ENST00000541029 ZNF609O15014 1411 aa25.44■■□□□ 1.66
ATN1-204ENST00000541029 GRM8O00222 908 aa25.43■■□□□ 1.66
ATN1-204ENST00000541029 HSPA1AP0DMV8 641 aaKnown RBP25.43■■□□□ 1.66
ATN1-204ENST00000541029 HSPA1BP0DMV9 641 aaKnown RBP25.43■■□□□ 1.66
ATN1-204ENST00000541029 CCT4P50991 539 aaKnown RBP25.43■■□□□ 1.66
ATN1-204ENST00000541029 FOXO4P98177 505 aa25.43■■□□□ 1.66
ATN1-204ENST00000541029 SLFN5Q08AF3 891 aa25.43■■□□□ 1.66
ATN1-204ENST00000541029 SAMD7Q7Z3H4 446 aa25.43■■□□□ 1.66
ATN1-204ENST00000541029 CDCA7LQ96GN5 454 aa25.43■■□□□ 1.66
ATN1-204ENST00000541029 GLIS2Q9BZE0 524 aaPredicted RBP25.43■■□□□ 1.66
ATN1-204ENST00000541029 THSD7BQ9C0I4 1608 aa25.43■■□□□ 1.66
ATN1-204ENST00000541029 EGFRP00533 1210 aa25.42■■□□□ 1.66
ATN1-204ENST00000541029 VIL1P09327 827 aaKnown RBP25.42■■□□□ 1.66
ATN1-204ENST00000541029 TBC1D10BQ4KMP7 808 aaPredicted RBP25.42■■□□□ 1.66
ATN1-204ENST00000541029 MRPL50Q8N5N7 158 aaKnown RBP25.42■■□□□ 1.66
ATN1-204ENST00000541029 MPHOSPH8Q99549 860 aa25.42■■□□□ 1.66
ATN1-204ENST00000541029 PGAP2Q9UHJ9 254 aa25.42■■□□□ 1.66
ATN1-204ENST00000541029 ABT1Q9ULW3 272 aaKnown RBP25.42■■□□□ 1.66
ATN1-204ENST00000541029 CHMP3Q9Y3E7 222 aa25.42■■□□□ 1.66
ATN1-204ENST00000541029 ANKRD18BA2A2Z9 1011 aa25.41■■□□□ 1.66
ATN1-204ENST00000541029 RASSF10A6NK89 507 aa25.41■■□□□ 1.66
ATN1-204ENST00000541029 ALDH1L1O75891 902 aa25.41■■□□□ 1.66
ATN1-204ENST00000541029 EPHA10Q5JZY3 1008 aa25.41■■□□□ 1.66
ATN1-204ENST00000541029 ZC3H15Q8WU90 426 aaKnown RBP25.41■■□□□ 1.66
ATN1-204ENST00000541029 SRCIN1Q9C0H9 1055 aa25.41■■□□□ 1.66
ATN1-204ENST00000541029 VEGFBP49765 207 aa25.4■■□□□ 1.66
ATN1-204ENST00000541029 CST9Q5W186 159 aa25.39■■□□□ 1.66
ATN1-204ENST00000541029 RSBN1LQ6PCB5 846 aaPredicted RBP25.39■■□□□ 1.66
ATN1-204ENST00000541029 SSH1Q8WYL5 1049 aa25.39■■□□□ 1.66
ATN1-204ENST00000541029 C9orf78Q9NZ63 289 aaPredicted RBP25.39■■□□□ 1.66
ATN1-204ENST00000541029 KLRK1P26718 216 aa25.38■■□□□ 1.65
ATN1-204ENST00000541029 CHRNDQ07001 517 aa25.38■■□□□ 1.65
ATN1-204ENST00000541029 IFIT5Q13325 482 aaKnown RBP25.38■■□□□ 1.65
ATN1-204ENST00000541029 LMBR1LQ6UX01 489 aa25.38■■□□□ 1.65
ATN1-204ENST00000541029 ANKRD2Q9GZV1 360 aa25.38■■□□□ 1.65
ATN1-204ENST00000541029 LEMD3Q9Y2U8 911 aa25.38■■□□□ 1.65
ATN1-204ENST00000541029 ZNF804BA4D1E1 1349 aa25.37■■□□□ 1.65
ATN1-204ENST00000541029 KIF4BQ2VIQ3 1234 aa25.37■■□□□ 1.65
ATN1-204ENST00000541029 DEFB115Q30KQ5 88 aa25.37■■□□□ 1.65
ATN1-204ENST00000541029 RBM26Q5T8P6 1007 aaKnown RBP25.37■■□□□ 1.65
ATN1-204ENST00000541029 PODNQ7Z5L7 613 aa25.37■■□□□ 1.65
ATN1-204ENST00000541029 TXNRD3Q86VQ6 643 aa25.37■■□□□ 1.65
ATN1-204ENST00000541029 PTPRCP08575 1304 aa25.37■■□□□ 1.65
ATN1-204ENST00000541029 CELF2O95319 508 aaKnown RBP25.36■■□□□ 1.65
ATN1-204ENST00000541029 USP17L3A6NCW0 530 aa25.35■■□□□ 1.65
ATN1-204ENST00000541029 USP17L4A6NCW7 530 aa25.35■■□□□ 1.65
ATN1-204ENST00000541029 CDC37L1Q7L3B6 337 aa25.35■■□□□ 1.65
ATN1-204ENST00000541029 USP17L1Q7RTZ2 530 aa25.35■■□□□ 1.65
ATN1-204ENST00000541029 AGBL3Q8NEM8 1001 aa25.35■■□□□ 1.65
ATN1-204ENST00000541029 SUCLG2Q96I99 432 aa25.35■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms