RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 RTL9Q8NET4 1388 aa34.86■■■■□ 3.17
CHFR-218ENST00000540963 EGFRP00533 1210 aa34.85■■■■□ 3.17
CHFR-218ENST00000540963 CCDC146Q8IYE0 955 aa34.85■■■■□ 3.17
CHFR-218ENST00000540963 CFAP44Q96MT7 982 aa34.85■■■■□ 3.17
CHFR-218ENST00000540963 ZIC5Q96T25 663 aa34.85■■■■□ 3.17
CHFR-218ENST00000540963 MYBBP1AQ9BQG0 1328 aaKnown RBP34.84■■■■□ 3.17
CHFR-218ENST00000540963 ZNF609O15014 1411 aa34.84■■■■□ 3.17
CHFR-218ENST00000540963 VIL1P09327 827 aaKnown RBP34.84■■■■□ 3.17
CHFR-218ENST00000540963 ZC3H12CQ9C0D7 883 aaKnown RBP34.84■■■■□ 3.17
CHFR-218ENST00000540963 SCN9AQ15858 1988 aa34.83■■■■□ 3.17
CHFR-218ENST00000540963 COL4A1P02462 1669 aa34.83■■■■□ 3.17
CHFR-218ENST00000540963 ZNF428Q96B54 188 aa34.83■■■■□ 3.17
CHFR-218ENST00000540963 AKAP11Q9UKA4 1901 aa34.83■■■■□ 3.17
CHFR-218ENST00000540963 DOK7Q18PE1 504 aa34.82■■■■□ 3.16
CHFR-218ENST00000540963 KIF4BQ2VIQ3 1234 aa34.82■■■■□ 3.16
CHFR-218ENST00000540963 ZBTB38Q8NAP3 1195 aaPredicted RBP34.82■■■■□ 3.16
CHFR-218ENST00000540963 DLK2Q6UY11 383 aa34.81■■■■□ 3.16
CHFR-218ENST00000540963 KCNQ5Q9NR82 932 aa34.81■■■■□ 3.16
CHFR-218ENST00000540963 DUSP27Q5VZP5 1158 aa34.8■■■■□ 3.16
CHFR-218ENST00000540963 SULF1Q8IWU6 871 aa34.8■■■■□ 3.16
CHFR-218ENST00000540963 PSME4Q14997 1843 aa34.8■■■■□ 3.16
CHFR-218ENST00000540963 ADM5C9JUS6 153 aa34.79■■■■□ 3.16
CHFR-218ENST00000540963 WDR43Q15061 677 aaKnown RBP eCLIP34.79■■■■□ 3.16
CHFR-218ENST00000540963 RTL5Q5HYW3 569 aaPredicted RBP34.79■■■■□ 3.16
CHFR-218ENST00000540963 RBM26Q5T8P6 1007 aaKnown RBP34.79■■■■□ 3.16
CHFR-218ENST00000540963 ZNF157P51786 506 aaPredicted RBP34.78■■■■□ 3.16
CHFR-218ENST00000540963 KIF23Q02241 960 aaPredicted RBP34.77■■■■□ 3.16
CHFR-218ENST00000540963 GOLGA2Q08379 1002 aa34.77■■■■□ 3.16
CHFR-218ENST00000540963 RIC3Q7Z5B4 369 aa34.77■■■■□ 3.16
CHFR-218ENST00000540963 REM2Q8IYK8 340 aaPredicted RBP34.77■■■■□ 3.16
CHFR-218ENST00000540963 AGBL3Q8NEM8 1001 aa34.77■■■■□ 3.16
CHFR-218ENST00000540963 GGA3Q9NZ52 723 aa34.77■■■■□ 3.16
CHFR-218ENST00000540963 G3V3G9 751 aa34.76■■■■□ 3.16
CHFR-218ENST00000540963 ZNF280AP59817 542 aaPredicted RBP34.76■■■■□ 3.16
CHFR-218ENST00000540963 DCAF8Q5TAQ9 597 aa34.76■■■■□ 3.16
CHFR-218ENST00000540963 GGA1Q9UJY5 639 aa34.76■■■■□ 3.16
CHFR-218ENST00000540963 UFL1O94874 794 aa34.75■■■■□ 3.15
CHFR-218ENST00000540963 SLC10A3P09131 477 aa34.75■■■■□ 3.15
CHFR-218ENST00000540963 ANKIB1Q9P2G1 1089 aa34.75■■■■□ 3.15
CHFR-218ENST00000540963 CCDC152Q4G0S7 254 aa34.74■■■■□ 3.15
CHFR-218ENST00000540963 CCDC191Q8NCU4 936 aa34.74■■■■□ 3.15
CHFR-218ENST00000540963 MBIPQ9NS73 344 aa34.74■■■■□ 3.15
CHFR-218ENST00000540963 SEC31BQ9NQW1 1179 aa34.73■■■■□ 3.15
CHFR-218ENST00000540963 RNF186Q9NXI6 227 aa34.73■■■■□ 3.15
CHFR-218ENST00000540963 PCCAP05165 728 aaPredicted RBP34.72■■■■□ 3.15
CHFR-218ENST00000540963 FKBP1BP68106 108 aa34.72■■■■□ 3.15
CHFR-218ENST00000540963 RSBN1LQ6PCB5 846 aaPredicted RBP34.72■■■■□ 3.15
CHFR-218ENST00000540963 ADAMTS8Q9UP79 889 aa34.72■■■■□ 3.15
CHFR-218ENST00000540963 PDE8AO60658 829 aa34.71■■■■□ 3.15
CHFR-218ENST00000540963 ZNF853P0CG23 659 aa34.71■■■■□ 3.15
CHFR-218ENST00000540963 CDCA5Q96FF9 252 aa34.71■■■■□ 3.15
CHFR-218ENST00000540963 PITPNM2Q9BZ72 1349 aa34.7■■■■□ 3.15
CHFR-218ENST00000540963 CSRNP1Q96S65 589 aa34.69■■■■□ 3.14
CHFR-218ENST00000540963 CHMP4AQ9BY43 222 aa34.69■■■■□ 3.14
CHFR-218ENST00000540963 TNRC18O15417 2968 aaPredicted RBP34.68■■■■□ 3.14
CHFR-218ENST00000540963 TRPA1O75762 1119 aa34.68■■■■□ 3.14
CHFR-218ENST00000540963 XDHP47989 1333 aa34.68■■■■□ 3.14
CHFR-218ENST00000540963 PAPPA2Q9BXP8 1791 aa34.68■■■■□ 3.14
CHFR-218ENST00000540963 CALD1Q05682 793 aaKnown RBP34.67■■■■□ 3.14
CHFR-218ENST00000540963 SCARF1Q14162 830 aa34.67■■■■□ 3.14
CHFR-218ENST00000540963 GMLQ99445 158 aa34.67■■■■□ 3.14
CHFR-218ENST00000540963 PHAXQ9H814 394 aaKnown RBP34.67■■■■□ 3.14
CHFR-218ENST00000540963 IFT57Q9NWB7 429 aa34.67■■■■□ 3.14
CHFR-218ENST00000540963 ASTN2O75129 1339 aaPredicted RBP34.66■■■■□ 3.14
CHFR-218ENST00000540963 ANGEL2Q5VTE6 544 aaKnown RBP34.66■■■■□ 3.14
CHFR-218ENST00000540963 PODNQ7Z5L7 613 aa34.66■■■■□ 3.14
CHFR-218ENST00000540963 MYD88Q99836 296 aa34.66■■■■□ 3.14
CHFR-218ENST00000540963 CWC25Q9NXE8 425 aaPredicted RBP34.66■■■■□ 3.14
CHFR-218ENST00000540963 USP17L8P0C7I0 530 aa34.65■■■■□ 3.14
CHFR-218ENST00000540963 GNAI1P63096 354 aa34.65■■■■□ 3.14
CHFR-218ENST00000540963 ANKRD18AQ8IVF6 992 aa34.65■■■■□ 3.14
CHFR-218ENST00000540963 ATP2B4P23634 1241 aa34.64■■■■□ 3.14
CHFR-218ENST00000540963 MYOZ2Q9NPC6 264 aa34.64■■■■□ 3.14
CHFR-218ENST00000540963 PDE4DIPQ5VU43 2346 aa34.63■■■■□ 3.13
CHFR-218ENST00000540963 DDX58O95786 925 aaKnown RBP34.63■■■■□ 3.13
CHFR-218ENST00000540963 RASAL3Q86YV0 1011 aa34.63■■■■□ 3.13
CHFR-218ENST00000540963 METTL22Q9BUU2 404 aaPredicted RBP34.63■■■■□ 3.13
CHFR-218ENST00000540963 USP17L3A6NCW0 530 aa34.62■■■■□ 3.13
CHFR-218ENST00000540963 USP17L4A6NCW7 530 aa34.62■■■■□ 3.13
CHFR-218ENST00000540963 USP17L1Q7RTZ2 530 aa34.62■■■■□ 3.13
CHFR-218ENST00000540963 MYH3P11055 1940 aa34.6■■■■□ 3.13
CHFR-218ENST00000540963 DDX10Q13206 875 aaKnown RBP34.6■■■■□ 3.13
CHFR-218ENST00000540963 CTU1Q7Z7A3 348 aaKnown RBP34.6■■■■□ 3.13
CHFR-218ENST00000540963 CDC5LQ99459 802 aaKnown RBP34.6■■■■□ 3.13
CHFR-218ENST00000540963 MED23Q9ULK4 1368 aa34.58■■■■□ 3.13
CHFR-218ENST00000540963 MMP14P50281 582 aa34.57■■■■□ 3.12
CHFR-218ENST00000540963 CCDC30Q5VVM6 783 aa34.57■■■■□ 3.12
CHFR-218ENST00000540963 PCDH10Q9P2E7 1040 aa34.57■■■■□ 3.12
CHFR-218ENST00000540963 ELL2O00472 640 aaPredicted RBP34.55■■■■□ 3.12
CHFR-218ENST00000540963 CTSWP56202 376 aa34.55■■■■□ 3.12
CHFR-218ENST00000540963 CCDC85AQ96PX6 553 aaPredicted RBP34.55■■■■□ 3.12
CHFR-218ENST00000540963 BSDC1Q9NW68 430 aaPredicted RBP34.55■■■■□ 3.12
CHFR-218ENST00000540963 PKN2Q16513 984 aaKnown RBP34.54■■■■□ 3.12
CHFR-218ENST00000540963 MYO3BQ8WXR4 1341 aa34.54■■■■□ 3.12
CHFR-218ENST00000540963 ZNF646O15015 1829 aaPredicted RBP34.53■■■■□ 3.12
CHFR-218ENST00000540963 OGFOD1Q8N543 542 aa34.53■■■■□ 3.12
CHFR-218ENST00000540963 APAF1O14727 1248 aa34.52■■■■□ 3.12
CHFR-218ENST00000540963 C8orf58Q8NAV2 365 aa34.52■■■■□ 3.12
CHFR-218ENST00000540963 TTLL11Q8NHH1 800 aa34.52■■■■□ 3.12
CHFR-218ENST00000540963 JARID2Q92833 1246 aaPredicted RBP34.52■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms