RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SNX21Q969T3 373 aa14.89□□□□□ -0.03
AP003559.1-201ENST00000540906 CNNM1Q9NRU3 951 aa14.89□□□□□ -0.03
AP003559.1-201ENST00000540906 DIAPH3Q9NSV4 1193 aa14.89□□□□□ -0.03
AP003559.1-201ENST00000540906 TNRC6CQ9HCJ0 1690 aaKnown RBP14.88□□□□□ -0.03
AP003559.1-201ENST00000540906 ZPR1O75312 459 aa14.88□□□□□ -0.03
AP003559.1-201ENST00000540906 SLKQ9H2G2 1235 aaPredicted RBP14.88□□□□□ -0.03
AP003559.1-201ENST00000540906 ANTXR1Q9H6X2 564 aa14.88□□□□□ -0.03
AP003559.1-201ENST00000540906 RAD50Q92878 1312 aa14.88□□□□□ -0.03
AP003559.1-201ENST00000540906 RTL9Q8NET4 1388 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 ATP2B3Q16720 1220 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 ZNF589Q86UQ0 364 aaPredicted RBP14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 A0A1B0GUL6 1792 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 MED23Q9ULK4 1368 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 GOLIM4O00461 696 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 EIF5BO60841 1220 aaKnown RBP14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 RABEP1Q15276 862 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 TRAPPC3LQ5T215 181 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 PI16Q6UXB8 463 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 HSCBQ8IWL3 235 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 ANP32EQ9BTT0 268 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 SNRKQ9NRH2 765 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 ARAP2Q8WZ64 1704 aa14.87□□□□□ -0.03
AP003559.1-201ENST00000540906 AKAP11Q9UKA4 1901 aa14.86□□□□□ -0.03
AP003559.1-201ENST00000540906 RGL2O15211 777 aa14.86□□□□□ -0.03
AP003559.1-201ENST00000540906 TAF5LO75529 589 aa14.86□□□□□ -0.03
AP003559.1-201ENST00000540906 HSPA4P34932 840 aa14.86□□□□□ -0.03
AP003559.1-201ENST00000540906 CCDC152Q4G0S7 254 aa14.86□□□□□ -0.03
AP003559.1-201ENST00000540906 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
AP003559.1-201ENST00000540906 SEC62Q99442 399 aaKnown RBP14.86□□□□□ -0.03
AP003559.1-201ENST00000540906 WTIPA6NIX2 430 aaPredicted RBP14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 PDE8BO95263 885 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 IFIT1P09914 478 aaKnown RBP14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 FGFR2P21802 821 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 RFC4P35249 363 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 TXNRD1Q16881 649 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 CCDC129Q6ZRS4 1044 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 SLC51AQ86UW1 340 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 SETDB2Q96T68 719 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 PAG1Q9NWQ8 432 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 AKAP2Q9Y2D5 859 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 NFIXQ14938 502 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 SLC10A5Q5PT55 438 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 KBTBD3Q8NAB2 608 aa14.85□□□□□ -0.03
AP003559.1-201ENST00000540906 SF3B3Q15393 1217 aaKnown RBP14.84□□□□□ -0.03
AP003559.1-201ENST00000540906 SLC27A3Q5K4L6 730 aa14.84□□□□□ -0.03
AP003559.1-201ENST00000540906 TTC39AQ5SRH9 613 aa14.84□□□□□ -0.03
AP003559.1-201ENST00000540906 NBPF5PQ86XG9 351 aaPredicted RBP14.84□□□□□ -0.03
AP003559.1-201ENST00000540906 IL17RAQ96F46 866 aa14.84□□□□□ -0.03
AP003559.1-201ENST00000540906 MCAMP43121 646 aa14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 ZAP70P43403 619 aa14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 PHKA1P46020 1223 aa14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 COL9A3Q14050 684 aaPredicted RBP14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 ZNF827Q17R98 1081 aa14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 RUFY2Q8WXA3 655 aa14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 CELF1Q92879 486 aaKnown RBP14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 FOXD4L1Q9NU39 408 aa14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 SNX14Q9Y5W7 946 aa14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 MYO5AQ9Y4I1 1855 aaKnown RBP14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 TNS1Q9HBL0 1735 aaKnown RBP14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 CCDC171Q6TFL3 1326 aa14.83□□□□□ -0.04
AP003559.1-201ENST00000540906 K7ELQ4 463 aaPredicted RBP14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 GYS1P13807 737 aa14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 NBR1Q14596 966 aa14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 GORABQ5T7V8 394 aa14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 MPHOSPH8Q99549 860 aa14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 TAF6LQ9Y6J9 622 aa14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 MROH5Q6ZUA9 1318 aa14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 RFX7Q2KHR2 1363 aa14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 HIP1O00291 1037 aa14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 APBA3O96018 575 aa14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 GTF2E1P29083 439 aaPredicted RBP14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 FKBP4Q02790 459 aaKnown RBP eCLIP14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 CHRNDQ07001 517 aa14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 UPF3BQ9BZI7 483 aaKnown RBP14.82□□□□□ -0.04
AP003559.1-201ENST00000540906 MCCP23508 829 aa14.81□□□□□ -0.04
AP003559.1-201ENST00000540906 IGHMBP2P38935 993 aaKnown RBP14.81□□□□□ -0.04
AP003559.1-201ENST00000540906 PUM3Q15397 648 aaKnown RBP14.81□□□□□ -0.04
AP003559.1-201ENST00000540906 CCDC158Q5M9N0 1113 aa14.81□□□□□ -0.04
AP003559.1-201ENST00000540906 CCDC102BQ68D86 513 aa14.81□□□□□ -0.04
AP003559.1-201ENST00000540906 PRPF40BQ6NWY9 871 aaKnown RBP14.81□□□□□ -0.04
AP003559.1-201ENST00000540906 KIAA1211Q6ZU35 1233 aa14.81□□□□□ -0.04
AP003559.1-201ENST00000540906 NYXQ9GZU5 481 aa14.81□□□□□ -0.04
AP003559.1-201ENST00000540906 EPB41L2O43491 1005 aaKnown RBP14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 CPA1P15085 419 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 ADRA2BP18089 450 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 TM4SF1P30408 202 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 DDIT3P35638 169 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 ANAPC15P60006 121 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 MAP4K1Q92918 833 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 RBM8AQ9Y5S9 174 aaKnown RBP14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 NEK4P51957 841 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 NECTIN1Q15223 517 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 ADCK5Q3MIX3 580 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 LPIN2Q92539 896 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 KCNB2Q92953 911 aa14.8□□□□□ -0.04
AP003559.1-201ENST00000540906 M0R2C6 588 aa14.79□□□□□ -0.04
AP003559.1-201ENST00000540906 SSFA2P28290 1259 aa14.79□□□□□ -0.04
AP003559.1-201ENST00000540906 DDR1Q08345 913 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms