RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 KIF3CO14782 793 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 UFL1O94874 794 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 TRIM27P14373 513 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 EIF6P56537 245 aaKnown RBP11.62□□□□□ -0.55
SNHG1-215ENST00000540904 KIAA2012Q0VF49 1180 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 WASHC4Q2M389 1173 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 CCDC57Q2TAC2 916 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 ATF7IPQ6VMQ6 1270 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 KAZALD1Q96I82 304 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 GPR101Q96P66 508 aaPredicted RBP11.62□□□□□ -0.55
SNHG1-215ENST00000540904 MPHOSPH8Q99549 860 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 BICC1Q9H694 974 aaKnown RBP11.62□□□□□ -0.55
SNHG1-215ENST00000540904 POLLQ9UGP5 575 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 GGA1Q9UJY5 639 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 MINPP1Q9UNW1 487 aa11.62□□□□□ -0.55
SNHG1-215ENST00000540904 TIAM2Q8IVF5 1701 aa11.61□□□□□ -0.55
SNHG1-215ENST00000540904 RIMBP2O15034 1052 aa11.61□□□□□ -0.55
SNHG1-215ENST00000540904 TAF7LQ5H9L4 462 aa11.61□□□□□ -0.55
SNHG1-215ENST00000540904 C16orf71Q8IYS4 520 aaPredicted RBP11.61□□□□□ -0.55
SNHG1-215ENST00000540904 TBC1D16Q8TBP0 767 aa11.61□□□□□ -0.55
SNHG1-215ENST00000540904 CLUAP1Q96AJ1 413 aa11.61□□□□□ -0.55
SNHG1-215ENST00000540904 EYA3Q99504 573 aa11.61□□□□□ -0.55
SNHG1-215ENST00000540904 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
SNHG1-215ENST00000540904 TNNQ9UQP3 1299 aa11.61□□□□□ -0.55
SNHG1-215ENST00000540904 COL4A5P29400 1685 aa11.61□□□□□ -0.55
SNHG1-215ENST00000540904 XDHP47989 1333 aa11.6□□□□□ -0.55
SNHG1-215ENST00000540904 UBTFL1P0CB47 393 aaPredicted RBP11.6□□□□□ -0.55
SNHG1-215ENST00000540904 VEGFAP15692 232 aaPredicted RBP11.6□□□□□ -0.55
SNHG1-215ENST00000540904 C1QTNF8P60827 252 aa11.6□□□□□ -0.55
SNHG1-215ENST00000540904 ZKSCAN2Q63HK3 967 aa11.6□□□□□ -0.55
SNHG1-215ENST00000540904 ZNF594Q96JF6 807 aaPredicted RBP11.6□□□□□ -0.55
SNHG1-215ENST00000540904 ZC3H12CQ9C0D7 883 aaKnown RBP11.6□□□□□ -0.55
SNHG1-215ENST00000540904 ZNRF3Q9ULT6 936 aa11.6□□□□□ -0.55
SNHG1-215ENST00000540904 GJA3Q9Y6H8 435 aa11.6□□□□□ -0.55
SNHG1-215ENST00000540904 CCDC88AQ3V6T2 1871 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 DUOX1Q9NRD9 1551 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 WTIPA6NIX2 430 aaPredicted RBP11.59□□□□□ -0.55
SNHG1-215ENST00000540904 POTECB2RU33 542 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 G3V3G9 751 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 ATP2B4P23634 1241 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 DOK7Q18PE1 504 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 INTS3Q68E01 1043 aaKnown RBP11.59□□□□□ -0.55
SNHG1-215ENST00000540904 GPC2Q8N158 579 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 ANKRD44Q8N8A2 993 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 YTHDC1Q96MU7 727 aaKnown RBP11.59□□□□□ -0.55
SNHG1-215ENST00000540904 DBNDD1Q9H9R9 158 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 LRRC37AA6NMS7 1700 aa11.59□□□□□ -0.55
SNHG1-215ENST00000540904 RAD17O75943 681 aa11.58□□□□□ -0.56
SNHG1-215ENST00000540904 TOMM70O94826 608 aa11.58□□□□□ -0.56
SNHG1-215ENST00000540904 CHRNDQ07001 517 aa11.58□□□□□ -0.56
SNHG1-215ENST00000540904 CXCL9Q07325 125 aa11.58□□□□□ -0.56
SNHG1-215ENST00000540904 RABL6Q3YEC7 729 aaPredicted RBP11.58□□□□□ -0.56
SNHG1-215ENST00000540904 LDHAL6AQ6ZMR3 332 aa11.58□□□□□ -0.56
SNHG1-215ENST00000540904 HELBQ8NG08 1087 aaPredicted RBP11.58□□□□□ -0.56
SNHG1-215ENST00000540904 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
SNHG1-215ENST00000540904 MEIS3Q99687 375 aa11.58□□□□□ -0.56
SNHG1-215ENST00000540904 ANKRD2Q9GZV1 360 aa11.58□□□□□ -0.56
SNHG1-215ENST00000540904 CNNM1Q9NRU3 951 aa11.58□□□□□ -0.56
SNHG1-215ENST00000540904 MYH3P11055 1940 aa11.57□□□□□ -0.56
SNHG1-215ENST00000540904 DICER1Q9UPY3 1922 aaKnown RBP11.57□□□□□ -0.56
SNHG1-215ENST00000540904 IQCA1LA6NCM1 817 aa11.57□□□□□ -0.56
SNHG1-215ENST00000540904 YDJCA8MPS7 323 aa11.57□□□□□ -0.56
SNHG1-215ENST00000540904 PLIN1O60240 522 aa11.57□□□□□ -0.56
SNHG1-215ENST00000540904 ECE2O60344 883 aa11.57□□□□□ -0.56
SNHG1-215ENST00000540904 KCNJ4P48050 445 aa11.57□□□□□ -0.56
SNHG1-215ENST00000540904 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
SNHG1-215ENST00000540904 TMEM57Q8N5G2 664 aa11.57□□□□□ -0.56
SNHG1-215ENST00000540904 HDAC5Q9UQL6 1122 aa11.57□□□□□ -0.56
SNHG1-215ENST00000540904 LEMD3Q9Y2U8 911 aa11.57□□□□□ -0.56
SNHG1-215ENST00000540904 TAF5LO75529 589 aa11.56□□□□□ -0.56
SNHG1-215ENST00000540904 GNAI3P08754 354 aa11.56□□□□□ -0.56
SNHG1-215ENST00000540904 TNIP1Q15025 636 aa11.56□□□□□ -0.56
SNHG1-215ENST00000540904 CIAPIN1Q6FI81 312 aa11.56□□□□□ -0.56
SNHG1-215ENST00000540904 DZIP1LQ8IYY4 767 aaKnown RBP11.56□□□□□ -0.56
SNHG1-215ENST00000540904 PUS3Q9BZE2 481 aaKnown RBP11.56□□□□□ -0.56
SNHG1-215ENST00000540904 HACL1Q9UJ83 578 aa11.56□□□□□ -0.56
SNHG1-215ENST00000540904 RCAN3Q9UKA8 241 aa11.56□□□□□ -0.56
SNHG1-215ENST00000540904 LRRFIP2Q9Y608 721 aaKnown RBP11.56□□□□□ -0.56
SNHG1-215ENST00000540904 ZNF804BA4D1E1 1349 aa11.56□□□□□ -0.56
SNHG1-215ENST00000540904 LTBP1Q14766 1721 aa11.55□□□□□ -0.56
SNHG1-215ENST00000540904 SNAP23O00161 211 aa11.55□□□□□ -0.56
SNHG1-215ENST00000540904 LMOD1P29536 600 aaPredicted RBP11.55□□□□□ -0.56
SNHG1-215ENST00000540904 EPHX2P34913 555 aa11.55□□□□□ -0.56
SNHG1-215ENST00000540904 ITPRIPQ8IWB1 547 aa11.55□□□□□ -0.56
SNHG1-215ENST00000540904 KLHDC4Q8TBB5 520 aa11.55□□□□□ -0.56
SNHG1-215ENST00000540904 RBM46Q8TBY0 533 aaKnown RBP11.55□□□□□ -0.56
SNHG1-215ENST00000540904 TAF1DQ9H5J8 278 aaPredicted RBP11.55□□□□□ -0.56
SNHG1-215ENST00000540904 KCNQ5Q9NR82 932 aa11.55□□□□□ -0.56
SNHG1-215ENST00000540904 WDR90Q96KV7 1748 aa11.55□□□□□ -0.56
SNHG1-215ENST00000540904 PSMD14O00487 310 aa11.54□□□□□ -0.56
SNHG1-215ENST00000540904 RLBP1P12271 317 aa11.54□□□□□ -0.56
SNHG1-215ENST00000540904 KLRK1P26718 216 aa11.54□□□□□ -0.56
SNHG1-215ENST00000540904 GMPSP49915 693 aaPredicted RBP11.54□□□□□ -0.56
SNHG1-215ENST00000540904 SCNN1DP51172 638 aa11.54□□□□□ -0.56
SNHG1-215ENST00000540904 LRRC24Q50LG9 513 aa11.54□□□□□ -0.56
SNHG1-215ENST00000540904 EAPPQ56P03 285 aaPredicted RBP11.54□□□□□ -0.56
SNHG1-215ENST00000540904 TXNRD3Q86VQ6 643 aa11.54□□□□□ -0.56
SNHG1-215ENST00000540904 ZBTB12Q9Y330 459 aaPredicted RBP11.54□□□□□ -0.56
SNHG1-215ENST00000540904 RIPOR2Q9Y4F9 1068 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms