RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 DLK2Q6UY11 383 aa18.59■□□□□ 0.57
MSRB3-209ENST00000540804 MICALL2Q8IY33 904 aa18.59■□□□□ 0.57
MSRB3-209ENST00000540804 RTL9Q8NET4 1388 aa18.58■□□□□ 0.57
MSRB3-209ENST00000540804 CDHR2Q9BYE9 1310 aa18.58■□□□□ 0.57
MSRB3-209ENST00000540804 RASSF10A6NK89 507 aa18.58■□□□□ 0.56
MSRB3-209ENST00000540804 NEURL1BA8MQ27 555 aa18.58■□□□□ 0.56
MSRB3-209ENST00000540804 FOXN1O15353 648 aa18.58■□□□□ 0.56
MSRB3-209ENST00000540804 VAMP4O75379 141 aa18.58■□□□□ 0.56
MSRB3-209ENST00000540804 UFL1O94874 794 aa18.58■□□□□ 0.56
MSRB3-209ENST00000540804 CTSWP56202 376 aa18.58■□□□□ 0.56
MSRB3-209ENST00000540804 SAMD7Q7Z3H4 446 aa18.58■□□□□ 0.56
MSRB3-209ENST00000540804 ANKIB1Q9P2G1 1089 aa18.58■□□□□ 0.56
MSRB3-209ENST00000540804 FLIIQ13045 1269 aa18.57■□□□□ 0.56
MSRB3-209ENST00000540804 TTLL11Q8NHH1 800 aa18.57■□□□□ 0.56
MSRB3-209ENST00000540804 EYA3Q99504 573 aa18.57■□□□□ 0.56
MSRB3-209ENST00000540804 CHMP4AQ9BY43 222 aa18.57■□□□□ 0.56
MSRB3-209ENST00000540804 GREM2Q9H772 168 aa18.57■□□□□ 0.56
MSRB3-209ENST00000540804 PODXL2Q9NZ53 605 aa18.57■□□□□ 0.56
MSRB3-209ENST00000540804 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
MSRB3-209ENST00000540804 GRM1Q13255 1194 aa18.56■□□□□ 0.56
MSRB3-209ENST00000540804 TBC1D10BQ4KMP7 808 aaPredicted RBP18.56■□□□□ 0.56
MSRB3-209ENST00000540804 ANKRD18AQ8IVF6 992 aa18.56■□□□□ 0.56
MSRB3-209ENST00000540804 WDR63Q8IWG1 891 aa18.56■□□□□ 0.56
MSRB3-209ENST00000540804 GGA1Q9UJY5 639 aa18.56■□□□□ 0.56
MSRB3-209ENST00000540804 WDR33Q9C0J8 1336 aaKnown RBP18.55■□□□□ 0.56
MSRB3-209ENST00000540804 HSP90B1P14625 803 aaKnown RBP18.55■□□□□ 0.56
MSRB3-209ENST00000540804 FKBP5Q13451 457 aaPredicted RBP18.55■□□□□ 0.56
MSRB3-209ENST00000540804 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
MSRB3-209ENST00000540804 RBM26Q5T8P6 1007 aaKnown RBP18.55■□□□□ 0.56
MSRB3-209ENST00000540804 CYP4F22Q6NT55 531 aa18.55■□□□□ 0.56
MSRB3-209ENST00000540804 UBE3BQ7Z3V4 1068 aa18.55■□□□□ 0.56
MSRB3-209ENST00000540804 TNS4Q8IZW8 715 aa18.55■□□□□ 0.56
MSRB3-209ENST00000540804 ZC3H12CQ9C0D7 883 aaKnown RBP18.55■□□□□ 0.56
MSRB3-209ENST00000540804 PGAP2Q9UHJ9 254 aa18.55■□□□□ 0.56
MSRB3-209ENST00000540804 H7C1D1 291 aa18.54■□□□□ 0.56
MSRB3-209ENST00000540804 H7C1W4 665 aa18.54■□□□□ 0.56
MSRB3-209ENST00000540804 CAPN15O75808 1086 aa18.54■□□□□ 0.56
MSRB3-209ENST00000540804 PAXIP1Q6ZW49 1069 aaPredicted RBP18.54■□□□□ 0.56
MSRB3-209ENST00000540804 ZNF408Q9H9D4 720 aa18.54■□□□□ 0.56
MSRB3-209ENST00000540804 F6X3S4 739 aa18.53■□□□□ 0.56
MSRB3-209ENST00000540804 CELF2O95319 508 aaKnown RBP18.53■□□□□ 0.56
MSRB3-209ENST00000540804 GCKRQ14397 625 aa18.53■□□□□ 0.56
MSRB3-209ENST00000540804 USP48Q86UV5 1035 aa18.53■□□□□ 0.56
MSRB3-209ENST00000540804 DNAAF4Q8WXU2 420 aa18.53■□□□□ 0.56
MSRB3-209ENST00000540804 G3V3G9 751 aa18.52■□□□□ 0.56
MSRB3-209ENST00000540804 CASP7P55210 303 aa18.52■□□□□ 0.56
MSRB3-209ENST00000540804 DCAF8Q5TAQ9 597 aa18.52■□□□□ 0.56
MSRB3-209ENST00000540804 DPF2Q92785 391 aa18.52■□□□□ 0.56
MSRB3-209ENST00000540804 CAPNS2Q96L46 248 aa18.52■□□□□ 0.56
MSRB3-209ENST00000540804 MINPP1Q9UNW1 487 aa18.52■□□□□ 0.56
MSRB3-209ENST00000540804 TLL2Q9Y6L7 1015 aa18.52■□□□□ 0.56
MSRB3-209ENST00000540804 ASTN2O75129 1339 aaPredicted RBP18.51■□□□□ 0.55
MSRB3-209ENST00000540804 XDHP47989 1333 aa18.51■□□□□ 0.55
MSRB3-209ENST00000540804 VIL1P09327 827 aaKnown RBP18.51■□□□□ 0.55
MSRB3-209ENST00000540804 CDC5LQ99459 802 aaKnown RBP18.51■□□□□ 0.55
MSRB3-209ENST00000540804 WBP1LQ9NX94 342 aa18.51■□□□□ 0.55
MSRB3-209ENST00000540804 AOC2O75106 756 aa18.5■□□□□ 0.55
MSRB3-209ENST00000540804 ATP2B4P23634 1241 aa18.5■□□□□ 0.55
MSRB3-209ENST00000540804 FAM161AQ3B820 660 aa18.5■□□□□ 0.55
MSRB3-209ENST00000540804 ZC3H15Q8WU90 426 aaKnown RBP18.5■□□□□ 0.55
MSRB3-209ENST00000540804 BSDC1Q9NW68 430 aaPredicted RBP18.5■□□□□ 0.55
MSRB3-209ENST00000540804 ADM5C9JUS6 153 aa18.49■□□□□ 0.55
MSRB3-209ENST00000540804 CDC37L1Q7L3B6 337 aa18.49■□□□□ 0.55
MSRB3-209ENST00000540804 SAPCD2Q86UD0 394 aa18.49■□□□□ 0.55
MSRB3-209ENST00000540804 LINS1Q8NG48 757 aa18.49■□□□□ 0.55
MSRB3-209ENST00000540804 MXD3Q9BW11 206 aa18.49■□□□□ 0.55
MSRB3-209ENST00000540804 ITGA6P23229 1130 aa18.48■□□□□ 0.55
MSRB3-209ENST00000540804 RPS12P25398 132 aaKnown RBP18.48■□□□□ 0.55
MSRB3-209ENST00000540804 KLRK1P26718 216 aa18.48■□□□□ 0.55
MSRB3-209ENST00000540804 LBX1P52954 281 aa18.48■□□□□ 0.55
MSRB3-209ENST00000540804 TXNRD3Q86VQ6 643 aa18.48■□□□□ 0.55
MSRB3-209ENST00000540804 AIDAQ96BJ3 306 aa18.48■□□□□ 0.55
MSRB3-209ENST00000540804 SCN9AQ15858 1988 aa18.48■□□□□ 0.55
MSRB3-209ENST00000540804 CSF1RP07333 972 aa18.47■□□□□ 0.55
MSRB3-209ENST00000540804 CCT4P50991 539 aaKnown RBP18.47■□□□□ 0.55
MSRB3-209ENST00000540804 KIF4BQ2VIQ3 1234 aa18.47■□□□□ 0.55
MSRB3-209ENST00000540804 BEND3Q5T5X7 828 aa18.47■□□□□ 0.55
MSRB3-209ENST00000540804 RSBN1LQ6PCB5 846 aaPredicted RBP18.47■□□□□ 0.55
MSRB3-209ENST00000540804 PLA2G12BQ9BX93 195 aa18.47■□□□□ 0.55
MSRB3-209ENST00000540804 MYH16Q9H6N6 1097 aa18.47■□□□□ 0.55
MSRB3-209ENST00000540804 SNAP23O00161 211 aa18.46■□□□□ 0.55
MSRB3-209ENST00000540804 HSPA8P11142 646 aaKnown RBP18.46■□□□□ 0.55
MSRB3-209ENST00000540804 CTCFP49711 727 aaPredicted RBP18.46■□□□□ 0.55
MSRB3-209ENST00000540804 KRT26Q7Z3Y9 468 aa18.46■□□□□ 0.55
MSRB3-209ENST00000540804 SCAF8Q9UPN6 1271 aaKnown RBP18.46■□□□□ 0.55
MSRB3-209ENST00000540804 IGHMBP2P38935 993 aaKnown RBP18.45■□□□□ 0.54
MSRB3-209ENST00000540804 FOXO4P98177 505 aa18.45■□□□□ 0.54
MSRB3-209ENST00000540804 EPHA10Q5JZY3 1008 aa18.45■□□□□ 0.54
MSRB3-209ENST00000540804 FBXW7Q969H0 707 aa18.45■□□□□ 0.54
MSRB3-209ENST00000540804 GMLQ99445 158 aa18.45■□□□□ 0.54
MSRB3-209ENST00000540804 GGA3Q9NZ52 723 aa18.45■□□□□ 0.54
MSRB3-209ENST00000540804 SPEF2Q9C093 1822 aa18.44■□□□□ 0.54
MSRB3-209ENST00000540804 MED23Q9ULK4 1368 aa18.44■□□□□ 0.54
MSRB3-209ENST00000540804 USP17L3A6NCW0 530 aa18.44■□□□□ 0.54
MSRB3-209ENST00000540804 USP17L4A6NCW7 530 aa18.44■□□□□ 0.54
MSRB3-209ENST00000540804 ECE1P42892 770 aa18.44■□□□□ 0.54
MSRB3-209ENST00000540804 USP17L1Q7RTZ2 530 aa18.44■□□□□ 0.54
MSRB3-209ENST00000540804 DCPSQ96C86 337 aaKnown RBP18.44■□□□□ 0.54
MSRB3-209ENST00000540804 ZIC5Q96T25 663 aa18.44■□□□□ 0.54
MSRB3-209ENST00000540804 TSKSQ9UJT2 592 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms