RNA–Protein interactions for RNA: ENST00000540706.5

SMG1P4-205, Transcript of SMG1 pseudogene 4, humanhuman

TSL 2

Gene SMG1P4, Length 2,543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1P4-205ENST00000540706 GAPVD1Q14C86 1478 aa8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 INHAP05111 366 aa8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 FOXK2Q01167 660 aa8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 MCL1Q07820 350 aa8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 FAM43BQ6ZT52 329 aaPredicted RBP8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 FBXO27Q8NI29 283 aa8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 ZDHHC1Q8WTX9 485 aa8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 ZFRQ96KR1 1074 aaKnown RBP8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 UBA5Q9GZZ9 404 aa8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 CUX1P39880 1505 aa8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 WRNQ14191 1432 aaPredicted RBP eCLIP8.09□□□□□ -1.11
SMG1P4-205ENST00000540706 THNSL2Q86YJ6 484 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 FBF1Q8TES7 1133 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 SLC10A4Q96EP9 437 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 SEC16BQ96JE7 1060 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 PLCD4Q9BRC7 762 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 PTCH2Q9Y6C5 1203 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 ADAMTS12P58397 1594 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 CUL7Q14999 1698 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 BPNT1O95861 308 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 EXOSC10Q01780 885 aaKnown RBP8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 ALKBH2Q6NS38 261 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 FEZ1Q99689 392 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 ARNT2Q9HBZ2 717 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 ZIM2Q9NZV7 527 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 NOB1Q9ULX3 412 aaKnown RBP8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 MAPK8IP1Q9UQF2 711 aa8.08□□□□□ -1.12
SMG1P4-205ENST00000540706 SNAPC4Q5SXM2 1469 aa8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 KCNQ2O43526 872 aa8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 EIF4A3P38919 411 aaKnown RBP8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 INTS6LQ5JSJ4 861 aaKnown RBP8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 BCO2Q9BYV7 579 aa8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 NR1I2O75469 434 aa8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 SOX9P48436 509 aa8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 NUP160Q12769 1436 aa8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 KMT5BQ4FZB7 885 aa8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 C16orf86Q6ZW13 317 aa8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 CCAR1Q8IX12 1150 aaKnown RBP8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 SLKQ9H2G2 1235 aaPredicted RBP8.07□□□□□ -1.12
SMG1P4-205ENST00000540706 FHAD1B1AJZ9 1412 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 DDR2Q16832 855 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 STRA8Q7Z7C7 330 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 TRPM4Q8TD43 1214 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 FRMD6Q96NE9 622 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 MAP3K20Q9NYL2 800 aaKnown RBP8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 KLF15Q9UIH9 416 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 ARAP1Q96P48 1450 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 TNFRSF21O75509 655 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 GBP2P32456 591 aaPredicted RBP8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 PPP4CP60510 307 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 TRIP4Q15650 581 aaPredicted RBP8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 PPCSQ9HAB8 311 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 LATS2Q9NRM7 1088 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 PRKAG3Q9UGI9 489 aa8.06□□□□□ -1.12
SMG1P4-205ENST00000540706 NEFLP07196 543 aa8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 MYCLP1P12525 358 aaPredicted RBP8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 HDGFP51858 240 aaKnown RBP8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 COPS2P61201 443 aa8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 PPP2R5AQ15172 486 aa8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 HOMER1Q86YM7 354 aa8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 TREML1Q86YW5 311 aa8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 ALDH16A1Q8IZ83 802 aa8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 APBA2Q99767 749 aa8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 ANKIB1Q9P2G1 1089 aa8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 GPKOWQ92917 476 aaPredicted RBP eCLIP8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 TIFAQ96CG3 184 aa8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 WASHC2CQ9Y4E1 1318 aa8.05□□□□□ -1.12
SMG1P4-205ENST00000540706 A0A087X0B3 334 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 CPNE3O75131 537 aaKnown RBP8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 CTC1Q2NKJ3 1217 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 MRM1Q6IN84 353 aaKnown RBP8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 CNPY4Q8N129 248 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 C3orf58Q8NDZ4 430 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 CPLX3Q8WVH0 158 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 KCTD15Q96SI1 283 aaPredicted RBP8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 TYW1Q9NV66 732 aaKnown RBP8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 EML1O00423 815 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 GARTP22102 1010 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 PRPF40BQ6NWY9 871 aaKnown RBP8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 GPATCH11Q8N954 259 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 IFT43Q96FT9 208 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 RTFDC1Q9BY42 306 aaPredicted RBP8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 ASPSCR1Q9BZE9 553 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 TRIM8Q9BZR9 551 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 PCDH10Q9P2E7 1040 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 GRIN2AQ12879 1464 aa8.04□□□□□ -1.12
SMG1P4-205ENST00000540706 A6NJY4 79 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 TLR3O15455 904 aaKnown RBP8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 PDPK1O15530 556 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 MMP16P51512 607 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 LARP1BQ659C4 914 aaKnown RBP8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 SLC4A10Q6U841 1118 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 RUFY4Q6ZNE9 571 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 ZNF511Q8NB15 262 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 ARHGEF10LQ9HCE6 1279 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 TMEM63CQ9P1W3 806 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 FAM8A1Q9UBU6 413 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 ERVK-9P63128 1117 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 FGD1P98174 961 aa8.03□□□□□ -1.12
SMG1P4-205ENST00000540706 PPP4R4Q6NUP7 873 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms