RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 ERFEQ4G0M1 354 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 METTL24Q5JXM2 366 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 CLEC4GQ6UXB4 293 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 LDHAL6AQ6ZMR3 332 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 SPRYD3Q8NCJ5 442 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 ARHGEF1Q92888 912 aaKnown RBP11.59□□□□□ -0.55
PAAF1-209ENST00000540659 EDC3Q96F86 508 aaKnown RBP11.59□□□□□ -0.55
PAAF1-209ENST00000540659 FSD1Q9BTV5 496 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 TBC1D2Q9BYX2 928 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 IL25Q9H293 177 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 BCL2L12Q9HB09 334 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 DIAPH3Q9NSV4 1193 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 ATF5Q9Y2D1 282 aaPredicted RBP11.59□□□□□ -0.55
PAAF1-209ENST00000540659 TAF1P21675 1872 aa11.59□□□□□ -0.55
PAAF1-209ENST00000540659 ARAP2Q8WZ64 1704 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.58□□□□□ -0.56
PAAF1-209ENST00000540659 ADRA2BP18089 450 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 ATP5JP18859 108 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 GTF2E1P29083 439 aaPredicted RBP11.58□□□□□ -0.56
PAAF1-209ENST00000540659 RFC4P35249 363 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 TRAPPC3LQ5T215 181 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 HSCBQ8IWL3 235 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 FLAD1Q8NFF5 587 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 KIF2CQ99661 725 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 SGIP1Q9BQI5 828 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 GPR108Q9NPR9 543 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 SEC31BQ9NQW1 1179 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 A0A1B0GUL6 1792 aa11.58□□□□□ -0.56
PAAF1-209ENST00000540659 COL4A1P02462 1669 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 ADORA1P30542 326 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 CCDC152Q4G0S7 254 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 TTC39AQ5SRH9 613 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 GORABQ5T7V8 394 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 MSL1Q68DK7 614 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 CCDC24Q8N4L8 307 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 SLC16A10Q8TF71 515 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 SETDB2Q96T68 719 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 FBXO3Q9UK99 471 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 AKAP2Q9Y2D5 859 aa11.57□□□□□ -0.56
PAAF1-209ENST00000540659 NPHP1O15259 732 aa11.56□□□□□ -0.56
PAAF1-209ENST00000540659 SGSM2O43147 1006 aa11.56□□□□□ -0.56
PAAF1-209ENST00000540659 IFIT1P09914 478 aaKnown RBP11.56□□□□□ -0.56
PAAF1-209ENST00000540659 MCCP23508 829 aa11.56□□□□□ -0.56
PAAF1-209ENST00000540659 NMIQ13287 307 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-209ENST00000540659 ATP2B3Q16720 1220 aa11.56□□□□□ -0.56
PAAF1-209ENST00000540659 RUFY2Q8WXA3 655 aa11.56□□□□□ -0.56
PAAF1-209ENST00000540659 XAGE2Q96GT9 111 aa11.56□□□□□ -0.56
PAAF1-209ENST00000540659 MPHOSPH8Q99549 860 aa11.56□□□□□ -0.56
PAAF1-209ENST00000540659 PPP1R1BQ9UD71 204 aaPredicted RBP11.56□□□□□ -0.56
PAAF1-209ENST00000540659 RIPOR2Q9Y4F9 1068 aa11.56□□□□□ -0.56
PAAF1-209ENST00000540659 TNRC6CQ9HCJ0 1690 aaKnown RBP11.55□□□□□ -0.56
PAAF1-209ENST00000540659 ABCC12Q96J65 1359 aa11.55□□□□□ -0.56
PAAF1-209ENST00000540659 HIP1O00291 1037 aa11.55□□□□□ -0.56
PAAF1-209ENST00000540659 IGHMBP2P38935 993 aaKnown RBP11.55□□□□□ -0.56
PAAF1-209ENST00000540659 CCDC158Q5M9N0 1113 aa11.55□□□□□ -0.56
PAAF1-209ENST00000540659 KIAA1211Q6ZU35 1233 aa11.55□□□□□ -0.56
PAAF1-209ENST00000540659 C3orf67Q6ZVT6 689 aa11.55□□□□□ -0.56
PAAF1-209ENST00000540659 DDX46Q7L014 1031 aaKnown RBP11.55□□□□□ -0.56
PAAF1-209ENST00000540659 NBPF5PQ86XG9 351 aaPredicted RBP11.55□□□□□ -0.56
PAAF1-209ENST00000540659 HELBQ8NG08 1087 aaPredicted RBP11.55□□□□□ -0.56
PAAF1-209ENST00000540659 FAM227BQ96M60 508 aa11.55□□□□□ -0.56
PAAF1-209ENST00000540659 HAUS7Q99871 368 aa11.55□□□□□ -0.56
PAAF1-209ENST00000540659 NYXQ9GZU5 481 aa11.55□□□□□ -0.56
PAAF1-209ENST00000540659 SLKQ9H2G2 1235 aaPredicted RBP11.55□□□□□ -0.56
PAAF1-209ENST00000540659 GOLIM4O00461 696 aa11.54□□□□□ -0.56
PAAF1-209ENST00000540659 PAG1Q9NWQ8 432 aa11.54□□□□□ -0.56
PAAF1-209ENST00000540659 PALD1Q9ULE6 856 aa11.54□□□□□ -0.56
PAAF1-209ENST00000540659 MROH5Q6ZUA9 1318 aa11.54□□□□□ -0.56
PAAF1-209ENST00000540659 MYH7P12883 1935 aa11.53□□□□□ -0.56
PAAF1-209ENST00000540659 A0A0D9SFI3 127 aa11.53□□□□□ -0.56
PAAF1-209ENST00000540659 TAF5LO75529 589 aa11.53□□□□□ -0.56
PAAF1-209ENST00000540659 PDE8BO95263 885 aa11.53□□□□□ -0.56
PAAF1-209ENST00000540659 CD2BP2O95400 341 aaKnown RBP11.53□□□□□ -0.56
PAAF1-209ENST00000540659 RABEP1Q15276 862 aa11.53□□□□□ -0.56
PAAF1-209ENST00000540659 LSG1Q9H089 658 aaKnown RBP11.53□□□□□ -0.56
PAAF1-209ENST00000540659 SNRKQ9NRH2 765 aa11.53□□□□□ -0.56
PAAF1-209ENST00000540659 CHGBP05060 677 aa11.52□□□□□ -0.57
PAAF1-209ENST00000540659 POLD1P28340 1107 aa11.52□□□□□ -0.57
PAAF1-209ENST00000540659 FKBP4Q02790 459 aaKnown RBP eCLIP11.52□□□□□ -0.57
PAAF1-209ENST00000540659 PTH1RQ03431 593 aa11.52□□□□□ -0.57
PAAF1-209ENST00000540659 TPTE2Q6XPS3 522 aa11.52□□□□□ -0.57
PAAF1-209ENST00000540659 ANKRD18AQ8IVF6 992 aa11.52□□□□□ -0.57
PAAF1-209ENST00000540659 VGLL2Q8N8G2 317 aa11.52□□□□□ -0.57
PAAF1-209ENST00000540659 SNX21Q969T3 373 aa11.52□□□□□ -0.57
PAAF1-209ENST00000540659 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
PAAF1-209ENST00000540659 ANTXR1Q9H6X2 564 aa11.52□□□□□ -0.57
PAAF1-209ENST00000540659 RAD50Q92878 1312 aa11.52□□□□□ -0.57
PAAF1-209ENST00000540659 RTL9Q8NET4 1388 aa11.52□□□□□ -0.57
PAAF1-209ENST00000540659 MYO5AQ9Y4I1 1855 aaKnown RBP11.51□□□□□ -0.57
PAAF1-209ENST00000540659 SLC5A1P13866 664 aa11.51□□□□□ -0.57
PAAF1-209ENST00000540659 HSPA4P34932 840 aa11.51□□□□□ -0.57
PAAF1-209ENST00000540659 NBR1Q14596 966 aa11.51□□□□□ -0.57
PAAF1-209ENST00000540659 NFIXQ14938 502 aa11.51□□□□□ -0.57
PAAF1-209ENST00000540659 SF3B3Q15393 1217 aaKnown RBP11.51□□□□□ -0.57
PAAF1-209ENST00000540659 PUM3Q15397 648 aaKnown RBP11.51□□□□□ -0.57
PAAF1-209ENST00000540659 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.51□□□□□ -0.57
PAAF1-209ENST00000540659 NLRP3Q96P20 1036 aa11.51□□□□□ -0.57
PAAF1-209ENST00000540659 FOXD4L1Q9NU39 408 aa11.51□□□□□ -0.57
PAAF1-209ENST00000540659 CARMIL3Q8ND23 1372 aa11.51□□□□□ -0.57
PAAF1-209ENST00000540659 KIF13BQ9NQT8 1826 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms