RNA–Protein interactions for RNA: ENST00000540590.1

LMO3-223, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-223ENST00000540590 CLEC11AQ9Y240 323 aa15.44■□□□□ 0.06
LMO3-223ENST00000540590 KIF13BQ9NQT8 1826 aa15.44■□□□□ 0.06
LMO3-223ENST00000540590 CACNA1SQ13698 1873 aa15.44■□□□□ 0.06
LMO3-223ENST00000540590 KLRG2A4D1S0 409 aaPredicted RBP15.43■□□□□ 0.06
LMO3-223ENST00000540590 PDE4AP27815 886 aa15.43■□□□□ 0.06
LMO3-223ENST00000540590 CDC5LQ99459 802 aaKnown RBP15.43■□□□□ 0.06
LMO3-223ENST00000540590 MTFR1LQ9H019 292 aa15.43■□□□□ 0.06
LMO3-223ENST00000540590 IL1RAPL2Q9NP60 686 aa15.43■□□□□ 0.06
LMO3-223ENST00000540590 ZBTB47Q9UFB7 747 aaPredicted RBP15.43■□□□□ 0.06
LMO3-223ENST00000540590 IL15P40933 162 aaPredicted RBP15.42■□□□□ 0.06
LMO3-223ENST00000540590 LDHAL6AQ6ZMR3 332 aa15.42■□□□□ 0.06
LMO3-223ENST00000540590 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.42■□□□□ 0.06
LMO3-223ENST00000540590 C10orf71Q711Q0 1435 aa15.42■□□□□ 0.06
LMO3-223ENST00000540590 DLEC1Q9Y238 1755 aa15.41■□□□□ 0.06
LMO3-223ENST00000540590 PRKAR2AP13861 404 aaKnown RBP15.41■□□□□ 0.06
LMO3-223ENST00000540590 IGHMBP2P38935 993 aaKnown RBP15.41■□□□□ 0.06
LMO3-223ENST00000540590 RGS3P49796 1198 aa15.41■□□□□ 0.06
LMO3-223ENST00000540590 EVX2Q03828 476 aa15.41■□□□□ 0.06
LMO3-223ENST00000540590 TFCP2Q12800 502 aa15.41■□□□□ 0.06
LMO3-223ENST00000540590 DDX46Q7L014 1031 aaKnown RBP15.41■□□□□ 0.06
LMO3-223ENST00000540590 ANKRD18AQ8IVF6 992 aa15.41■□□□□ 0.06
LMO3-223ENST00000540590 CELF1Q92879 486 aaKnown RBP15.41■□□□□ 0.06
LMO3-223ENST00000540590 BCL11AQ9H165 835 aa15.41■□□□□ 0.06
LMO3-223ENST00000540590 CNNM1Q9NRU3 951 aa15.41■□□□□ 0.06
LMO3-223ENST00000540590 RIPOR2Q9Y4F9 1068 aa15.41■□□□□ 0.06
LMO3-223ENST00000540590 PDE6BP35913 854 aa15.4■□□□□ 0.06
LMO3-223ENST00000540590 C16orf71Q8IYS4 520 aaPredicted RBP15.4■□□□□ 0.06
LMO3-223ENST00000540590 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
LMO3-223ENST00000540590 MPHOSPH8Q99549 860 aa15.4■□□□□ 0.06
LMO3-223ENST00000540590 HOXA10P31260 410 aaPredicted RBP15.39■□□□□ 0.05
LMO3-223ENST00000540590 RPS8P62241 208 aaKnown RBP15.39■□□□□ 0.05
LMO3-223ENST00000540590 GRAPQ13588 217 aa15.39■□□□□ 0.05
LMO3-223ENST00000540590 GRAPLQ8TC17 118 aaPredicted RBP15.39■□□□□ 0.05
LMO3-223ENST00000540590 OTUD7AQ8TE49 926 aaPredicted RBP15.39■□□□□ 0.05
LMO3-223ENST00000540590 ARAP2Q8WZ64 1704 aa15.39■□□□□ 0.05
LMO3-223ENST00000540590 KIAA1551Q9HCM1 1747 aa15.39■□□□□ 0.05
LMO3-223ENST00000540590 LRRC37AA6NMS7 1700 aa15.38■□□□□ 0.05
LMO3-223ENST00000540590 SRGNP10124 158 aa15.38■□□□□ 0.05
LMO3-223ENST00000540590 POLD1P28340 1107 aa15.38■□□□□ 0.05
LMO3-223ENST00000540590 TMC4Q7Z404 712 aa15.38■□□□□ 0.05
LMO3-223ENST00000540590 CLASRPQ8N2M8 674 aaKnown RBP15.38■□□□□ 0.05
LMO3-223ENST00000540590 RBM17Q96I25 401 aaKnown RBP15.38■□□□□ 0.05
LMO3-223ENST00000540590 CRAMP1Q96RY5 1269 aa15.38■□□□□ 0.05
LMO3-223ENST00000540590 SGIP1Q9BQI5 828 aa15.38■□□□□ 0.05
LMO3-223ENST00000540590 BSDC1Q9NW68 430 aaPredicted RBP15.38■□□□□ 0.05
LMO3-223ENST00000540590 CEP126Q9P2H0 1117 aa15.38■□□□□ 0.05
LMO3-223ENST00000540590 SALL3Q9BXA9 1300 aa15.38■□□□□ 0.05
LMO3-223ENST00000540590 ZNF609O15014 1411 aa15.37■□□□□ 0.05
LMO3-223ENST00000540590 NPR1P16066 1061 aa15.37■□□□□ 0.05
LMO3-223ENST00000540590 TNNI3KQ59H18 835 aa15.37■□□□□ 0.05
LMO3-223ENST00000540590 METTL24Q5JXM2 366 aa15.37■□□□□ 0.05
LMO3-223ENST00000540590 PLEKHM2Q8IWE5 1019 aa15.37■□□□□ 0.05
LMO3-223ENST00000540590 VGLL2Q8N8G2 317 aa15.37■□□□□ 0.05
LMO3-223ENST00000540590 EAF2Q96CJ1 260 aaPredicted RBP15.37■□□□□ 0.05
LMO3-223ENST00000540590 GPR108Q9NPR9 543 aa15.37■□□□□ 0.05
LMO3-223ENST00000540590 FPGT-TNNI3KV9GXZ4 949 aa15.37■□□□□ 0.05
LMO3-223ENST00000540590 MROH5Q6ZUA9 1318 aa15.37■□□□□ 0.05
LMO3-223ENST00000540590 AACSQ86V21 672 aa15.36■□□□□ 0.05
LMO3-223ENST00000540590 C2CD5Q86YS7 1000 aa15.36■□□□□ 0.05
LMO3-223ENST00000540590 H0YIN7 160 aa15.35■□□□□ 0.05
LMO3-223ENST00000540590 CHRNA5P30532 468 aa15.35■□□□□ 0.05
LMO3-223ENST00000540590 PTGER2P43116 358 aa15.35■□□□□ 0.05
LMO3-223ENST00000540590 CHRNDQ07001 517 aa15.35■□□□□ 0.05
LMO3-223ENST00000540590 MKRN4PQ13434 485 aaPredicted RBP15.35■□□□□ 0.05
LMO3-223ENST00000540590 HELBQ8NG08 1087 aaPredicted RBP15.35■□□□□ 0.05
LMO3-223ENST00000540590 MASTLQ96GX5 879 aa15.35■□□□□ 0.05
LMO3-223ENST00000540590 CCDC8Q9H0W5 538 aaPredicted RBP15.35■□□□□ 0.05
LMO3-223ENST00000540590 MINPP1Q9UNW1 487 aa15.35■□□□□ 0.05
LMO3-223ENST00000540590 SLX4Q8IY92 1834 aa15.35■□□□□ 0.05
LMO3-223ENST00000540590 PDE8BO95263 885 aa15.34■□□□□ 0.05
LMO3-223ENST00000540590 IFIT2P09913 472 aaKnown RBP15.34■□□□□ 0.05
LMO3-223ENST00000540590 MX1P20591 662 aa15.34■□□□□ 0.05
LMO3-223ENST00000540590 PDE1AP54750 535 aa15.34■□□□□ 0.05
LMO3-223ENST00000540590 STYK1Q6J9G0 422 aa15.34■□□□□ 0.05
LMO3-223ENST00000540590 SLC51AQ86UW1 340 aa15.34■□□□□ 0.05
LMO3-223ENST00000540590 TLR7Q9NYK1 1049 aaKnown RBP15.34■□□□□ 0.05
LMO3-223ENST00000540590 AKAP2Q9Y2D5 859 aa15.34■□□□□ 0.05
LMO3-223ENST00000540590 BRCA1P38398 1863 aaKnown RBP15.33■□□□□ 0.05
LMO3-223ENST00000540590 A0A1B0GUL7 405 aa15.33■□□□□ 0.04
LMO3-223ENST00000540590 TAF5LO75529 589 aa15.33■□□□□ 0.04
LMO3-223ENST00000540590 BBOX1O75936 387 aa15.33■□□□□ 0.04
LMO3-223ENST00000540590 ALDH1B1P30837 517 aa15.33■□□□□ 0.04
LMO3-223ENST00000540590 ATP2B3Q16720 1220 aa15.33■□□□□ 0.04
LMO3-223ENST00000540590 ZNF622Q969S3 477 aaKnown RBP eCLIP15.33■□□□□ 0.04
LMO3-223ENST00000540590 OSBPL3Q9H4L5 887 aa15.33■□□□□ 0.04
LMO3-223ENST00000540590 STAP2Q9UGK3 403 aa15.33■□□□□ 0.04
LMO3-223ENST00000540590 SSUH2Q9Y2M2 353 aa15.33■□□□□ 0.04
LMO3-223ENST00000540590 LTBP1Q14766 1721 aa15.33■□□□□ 0.04
LMO3-223ENST00000540590 AK9Q5TCS8 1911 aa15.33■□□□□ 0.04
LMO3-223ENST00000540590 FGFR2P21802 821 aa15.32■□□□□ 0.04
LMO3-223ENST00000540590 TIMM10P62072 90 aa15.32■□□□□ 0.04
LMO3-223ENST00000540590 PUM3Q15397 648 aaKnown RBP15.32■□□□□ 0.04
LMO3-223ENST00000540590 TSHZ3Q63HK5 1081 aa15.32■□□□□ 0.04
LMO3-223ENST00000540590 NEUROD6Q96NK8 337 aa15.32■□□□□ 0.04
LMO3-223ENST00000540590 DBNDD2Q9BQY9 259 aa15.32■□□□□ 0.04
LMO3-223ENST00000540590 DBNLQ9UJU6 430 aaKnown RBP15.32■□□□□ 0.04
LMO3-223ENST00000540590 SNAP23O00161 211 aa15.31■□□□□ 0.04
LMO3-223ENST00000540590 PPEF1O14829 653 aaPredicted RBP15.31■□□□□ 0.04
LMO3-223ENST00000540590 GRIPAP1Q4V328 841 aa15.31■□□□□ 0.04
LMO3-223ENST00000540590 ANKRD2Q9GZV1 360 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms