RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 SH3TC1Q8TE82 1336 aa10.58□□□□□ -0.72
LRP6-204ENST00000540415 TAF1P21675 1872 aa10.57□□□□□ -0.72
LRP6-204ENST00000540415 POTEFA5A3E0 1075 aa10.57□□□□□ -0.72
LRP6-204ENST00000540415 GPR25O00155 361 aa10.57□□□□□ -0.72
LRP6-204ENST00000540415 VIL1P09327 827 aaKnown RBP10.57□□□□□ -0.72
LRP6-204ENST00000540415 PKN2Q16513 984 aaKnown RBP10.57□□□□□ -0.72
LRP6-204ENST00000540415 RTL5Q5HYW3 569 aaPredicted RBP10.57□□□□□ -0.72
LRP6-204ENST00000540415 FBXO46Q6PJ61 603 aaPredicted RBP10.57□□□□□ -0.72
LRP6-204ENST00000540415 TBC1D16Q8TBP0 767 aa10.57□□□□□ -0.72
LRP6-204ENST00000540415 SZT2Q5T011 3432 aa10.56□□□□□ -0.72
LRP6-204ENST00000540415 LRRC37AA6NMS7 1700 aa10.56□□□□□ -0.72
LRP6-204ENST00000540415 ZNF280AP59817 542 aaPredicted RBP10.56□□□□□ -0.72
LRP6-204ENST00000540415 TCIRG1Q13488 830 aa10.56□□□□□ -0.72
LRP6-204ENST00000540415 TMC4Q7Z404 712 aa10.56□□□□□ -0.72
LRP6-204ENST00000540415 FAM89AQ96GI7 184 aa10.56□□□□□ -0.72
LRP6-204ENST00000540415 PLEKHF1Q96S99 279 aa10.56□□□□□ -0.72
LRP6-204ENST00000540415 TSPYL4Q9UJ04 414 aa10.56□□□□□ -0.72
LRP6-204ENST00000540415 FXR1P51114 621 aaKnown RBP eCLIP10.55□□□□□ -0.72
LRP6-204ENST00000540415 NFE2L2Q16236 605 aa10.55□□□□□ -0.72
LRP6-204ENST00000540415 KRT24Q2M2I5 525 aa10.55□□□□□ -0.72
LRP6-204ENST00000540415 HSP90AB3PQ58FF7 597 aa10.55□□□□□ -0.72
LRP6-204ENST00000540415 REM2Q8IYK8 340 aaPredicted RBP10.55□□□□□ -0.72
LRP6-204ENST00000540415 GCC1Q96CN9 775 aa10.55□□□□□ -0.72
LRP6-204ENST00000540415 WTIPA6NIX2 430 aaPredicted RBP10.54□□□□□ -0.72
LRP6-204ENST00000540415 ATP5J2-PTCD1G3V325 749 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 UFL1O94874 794 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 TM4SF4P48230 202 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 SF3B3Q15393 1217 aaKnown RBP10.54□□□□□ -0.72
LRP6-204ENST00000540415 NBPF9Q3BBW0 867 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 RSBN1LQ6PCB5 846 aaPredicted RBP10.54□□□□□ -0.72
LRP6-204ENST00000540415 GMLQ99445 158 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 EYA3Q99504 573 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 MXD3Q9BW11 206 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 SEC31BQ9NQW1 1179 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 FZD1Q9UP38 647 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 ANKRD36CQ5JPF3 1778 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 POLR2AP24928 1970 aaKnown RBP10.54□□□□□ -0.72
LRP6-204ENST00000540415 SCN9AQ15858 1988 aa10.54□□□□□ -0.72
LRP6-204ENST00000540415 AKAP11Q9UKA4 1901 aa10.53□□□□□ -0.72
LRP6-204ENST00000540415 PAPPA2Q9BXP8 1791 aa10.53□□□□□ -0.72
LRP6-204ENST00000540415 FKTNO75072 461 aa10.53□□□□□ -0.72
LRP6-204ENST00000540415 FKBP1BP68106 108 aa10.53□□□□□ -0.72
LRP6-204ENST00000540415 PRKG1Q13976 671 aa10.53□□□□□ -0.72
LRP6-204ENST00000540415 TTLL12Q14166 644 aaPredicted RBP10.53□□□□□ -0.72
LRP6-204ENST00000540415 ZC3H12CQ9C0D7 883 aaKnown RBP10.53□□□□□ -0.72
LRP6-204ENST00000540415 MYOZ2Q9NPC6 264 aa10.53□□□□□ -0.72
LRP6-204ENST00000540415 RPS8P62241 208 aaKnown RBP10.52□□□□□ -0.73
LRP6-204ENST00000540415 PTPN12Q05209 780 aaKnown RBP10.52□□□□□ -0.73
LRP6-204ENST00000540415 ISCA1Q9BUE6 129 aa10.52□□□□□ -0.73
LRP6-204ENST00000540415 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.52□□□□□ -0.73
LRP6-204ENST00000540415 DDX60Q8IY21 1712 aaKnown RBP10.52□□□□□ -0.73
LRP6-204ENST00000540415 USP17L8P0C7I0 530 aa10.51□□□□□ -0.73
LRP6-204ENST00000540415 EN2P19622 333 aaPredicted RBP10.51□□□□□ -0.73
LRP6-204ENST00000540415 CAP1Q01518 475 aa10.51□□□□□ -0.73
LRP6-204ENST00000540415 NOM1Q5C9Z4 860 aaKnown RBP10.51□□□□□ -0.73
LRP6-204ENST00000540415 AGBL3Q8NEM8 1001 aa10.51□□□□□ -0.73
LRP6-204ENST00000540415 CCDC85AQ96PX6 553 aaPredicted RBP10.51□□□□□ -0.73
LRP6-204ENST00000540415 PODXL2Q9NZ53 605 aa10.51□□□□□ -0.73
LRP6-204ENST00000540415 CHPF2Q9P2E5 772 aa10.51□□□□□ -0.73
LRP6-204ENST00000540415 TRIM17Q9Y577 477 aa10.51□□□□□ -0.73
LRP6-204ENST00000540415 PITPNM2Q9BZ72 1349 aa10.51□□□□□ -0.73
LRP6-204ENST00000540415 ZNF609O15014 1411 aa10.5□□□□□ -0.73
LRP6-204ENST00000540415 G3V3G9 751 aa10.5□□□□□ -0.73
LRP6-204ENST00000540415 IRS4O14654 1257 aaPredicted RBP10.5□□□□□ -0.73
LRP6-204ENST00000540415 SASH1O94885 1247 aa10.5□□□□□ -0.73
LRP6-204ENST00000540415 DCAF8Q5TAQ9 597 aa10.5□□□□□ -0.73
LRP6-204ENST00000540415 OTOP1Q7RTM1 612 aa10.5□□□□□ -0.73
LRP6-204ENST00000540415 CCER1Q8TC90 406 aaPredicted RBP10.5□□□□□ -0.73
LRP6-204ENST00000540415 JARID2Q92833 1246 aaPredicted RBP10.5□□□□□ -0.73
LRP6-204ENST00000540415 CFHR5Q9BXR6 569 aa10.5□□□□□ -0.73
LRP6-204ENST00000540415 ANKIB1Q9P2G1 1089 aa10.5□□□□□ -0.73
LRP6-204ENST00000540415 GGA1Q9UJY5 639 aa10.5□□□□□ -0.73
LRP6-204ENST00000540415 COLQQ9Y215 455 aaPredicted RBP10.5□□□□□ -0.73
LRP6-204ENST00000540415 DLG5Q8TDM6 1919 aa10.5□□□□□ -0.73
LRP6-204ENST00000540415 NEFMP07197 916 aa10.49□□□□□ -0.73
LRP6-204ENST00000540415 SREBF2Q12772 1141 aa10.49□□□□□ -0.73
LRP6-204ENST00000540415 SPRYD7Q5W111 196 aa10.49□□□□□ -0.73
LRP6-204ENST00000540415 RANBP2P49792 3224 aaKnown RBP10.49□□□□□ -0.73
LRP6-204ENST00000540415 USP17L3A6NCW0 530 aa10.48□□□□□ -0.73
LRP6-204ENST00000540415 USP17L4A6NCW7 530 aa10.48□□□□□ -0.73
LRP6-204ENST00000540415 IGF2BP3O00425 579 aaKnown RBP eCLIP10.48□□□□□ -0.73
LRP6-204ENST00000540415 WNT10BO00744 389 aa10.48□□□□□ -0.73
LRP6-204ENST00000540415 RIPK4P57078 832 aa10.48□□□□□ -0.73
LRP6-204ENST00000540415 ANKRD13DQ6ZTN6 518 aa10.48□□□□□ -0.73
LRP6-204ENST00000540415 USP17L1Q7RTZ2 530 aa10.48□□□□□ -0.73
LRP6-204ENST00000540415 PLBD2Q8NHP8 589 aa10.48□□□□□ -0.73
LRP6-204ENST00000540415 CD99L2Q8TCZ2 262 aa10.48□□□□□ -0.73
LRP6-204ENST00000540415 MAPK8IP3Q9UPT6 1336 aa10.48□□□□□ -0.73
LRP6-204ENST00000540415 DACT2Q5SW24 774 aa10.47□□□□□ -0.73
LRP6-204ENST00000540415 LDLRAD1Q5T700 205 aa10.47□□□□□ -0.73
LRP6-204ENST00000540415 FBXW7Q969H0 707 aa10.47□□□□□ -0.73
LRP6-204ENST00000540415 CLMNQ96JQ2 1002 aa10.47□□□□□ -0.73
LRP6-204ENST00000540415 ANGEL1Q9UNK9 670 aaKnown RBP10.47□□□□□ -0.73
LRP6-204ENST00000540415 IFNL1Q8IU54 200 aa10.46□□□□□ -0.73
LRP6-204ENST00000540415 PTPN22Q9Y2R2 807 aa10.46□□□□□ -0.73
LRP6-204ENST00000540415 A0A0C4DFX4 3053 aa10.46□□□□□ -0.74
LRP6-204ENST00000540415 SSC5DA1L4H1 1573 aa10.45□□□□□ -0.74
LRP6-204ENST00000540415 XDHP47989 1333 aa10.45□□□□□ -0.74
LRP6-204ENST00000540415 NF2P35240 595 aa10.45□□□□□ -0.74
LRP6-204ENST00000540415 GJA5P36382 358 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms