RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 RGMBQ6NW40 437 aa16.17■□□□□ 0.18
COPS7A-211ENST00000540408 ZBTB38Q8NAP3 1195 aaPredicted RBP16.17■□□□□ 0.18
COPS7A-211ENST00000540408 TBC1D16Q8TBP0 767 aa16.17■□□□□ 0.18
COPS7A-211ENST00000540408 CCDC102AQ96A19 550 aa16.17■□□□□ 0.18
COPS7A-211ENST00000540408 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
COPS7A-211ENST00000540408 ADAMTS8Q9UP79 889 aa16.17■□□□□ 0.18
COPS7A-211ENST00000540408 CALD1Q05682 793 aaKnown RBP16.16■□□□□ 0.18
COPS7A-211ENST00000540408 SULF1Q8IWU6 871 aa16.16■□□□□ 0.18
COPS7A-211ENST00000540408 MCOLN1Q9GZU1 580 aa16.16■□□□□ 0.18
COPS7A-211ENST00000540408 PODXL2Q9NZ53 605 aa16.16■□□□□ 0.18
COPS7A-211ENST00000540408 TAF1P21675 1872 aa16.16■□□□□ 0.18
COPS7A-211ENST00000540408 VIL1P09327 827 aaKnown RBP16.15■□□□□ 0.18
COPS7A-211ENST00000540408 RGS19P49795 217 aa16.15■□□□□ 0.18
COPS7A-211ENST00000540408 ZNF157P51786 506 aaPredicted RBP16.15■□□□□ 0.18
COPS7A-211ENST00000540408 DGKZQ13574 1117 aa16.15■□□□□ 0.18
COPS7A-211ENST00000540408 KIF4BQ2VIQ3 1234 aa16.15■□□□□ 0.18
COPS7A-211ENST00000540408 CCDC152Q4G0S7 254 aa16.15■□□□□ 0.18
COPS7A-211ENST00000540408 KCNQ5Q9NR82 932 aa16.15■□□□□ 0.18
COPS7A-211ENST00000540408 DUOX1Q9NRD9 1551 aa16.15■□□□□ 0.18
COPS7A-211ENST00000540408 MBIPQ9NS73 344 aa16.15■□□□□ 0.18
COPS7A-211ENST00000540408 GGA1Q9UJY5 639 aa16.15■□□□□ 0.18
COPS7A-211ENST00000540408 LRRC37AA6NMS7 1700 aa16.14■□□□□ 0.17
COPS7A-211ENST00000540408 DDX60Q8IY21 1712 aaKnown RBP16.14■□□□□ 0.17
COPS7A-211ENST00000540408 UFL1O94874 794 aa16.14■□□□□ 0.17
COPS7A-211ENST00000540408 GNAI1P63096 354 aa16.14■□□□□ 0.17
COPS7A-211ENST00000540408 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
COPS7A-211ENST00000540408 MYD88Q99836 296 aa16.14■□□□□ 0.17
COPS7A-211ENST00000540408 RTL9Q8NET4 1388 aa16.13■□□□□ 0.17
COPS7A-211ENST00000540408 ADM5C9JUS6 153 aa16.13■□□□□ 0.17
COPS7A-211ENST00000540408 PDE8AO60658 829 aa16.13■□□□□ 0.17
COPS7A-211ENST00000540408 DDX58O95786 925 aaKnown RBP16.13■□□□□ 0.17
COPS7A-211ENST00000540408 EGFRP00533 1210 aa16.13■□□□□ 0.17
COPS7A-211ENST00000540408 DLK2Q6UY11 383 aa16.13■□□□□ 0.17
COPS7A-211ENST00000540408 AGBL3Q8NEM8 1001 aa16.13■□□□□ 0.17
COPS7A-211ENST00000540408 IFT57Q9NWB7 429 aa16.13■□□□□ 0.17
COPS7A-211ENST00000540408 SAGE1Q9NXZ1 904 aa16.13■□□□□ 0.17
COPS7A-211ENST00000540408 ELL2O00472 640 aaPredicted RBP16.12■□□□□ 0.17
COPS7A-211ENST00000540408 PCCAP05165 728 aaPredicted RBP16.12■□□□□ 0.17
COPS7A-211ENST00000540408 KIF23Q02241 960 aaPredicted RBP16.12■□□□□ 0.17
COPS7A-211ENST00000540408 ZIC5Q96T25 663 aa16.12■□□□□ 0.17
COPS7A-211ENST00000540408 PHAXQ9H814 394 aaKnown RBP16.12■□□□□ 0.17
COPS7A-211ENST00000540408 SEC31BQ9NQW1 1179 aa16.12■□□□□ 0.17
COPS7A-211ENST00000540408 CWC25Q9NXE8 425 aaPredicted RBP16.12■□□□□ 0.17
COPS7A-211ENST00000540408 GGA3Q9NZ52 723 aa16.12■□□□□ 0.17
COPS7A-211ENST00000540408 RSBN1LQ6PCB5 846 aaPredicted RBP16.11■□□□□ 0.17
COPS7A-211ENST00000540408 ANKRD18AQ8IVF6 992 aa16.11■□□□□ 0.17
COPS7A-211ENST00000540408 FAM155AB1AL88 458 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-211ENST00000540408 ZNF853P0CG23 659 aa16.1■□□□□ 0.17
COPS7A-211ENST00000540408 ATP2B4P23634 1241 aa16.1■□□□□ 0.17
COPS7A-211ENST00000540408 SCARF1Q14162 830 aa16.1■□□□□ 0.17
COPS7A-211ENST00000540408 CCDC30Q5VVM6 783 aa16.1■□□□□ 0.17
COPS7A-211ENST00000540408 PODNQ7Z5L7 613 aa16.1■□□□□ 0.17
COPS7A-211ENST00000540408 REM2Q8IYK8 340 aaPredicted RBP16.1■□□□□ 0.17
COPS7A-211ENST00000540408 XDHP47989 1333 aa16.1■□□□□ 0.17
COPS7A-211ENST00000540408 CASP8AP2Q9UKL3 1982 aa16.09■□□□□ 0.17
COPS7A-211ENST00000540408 APAF1O14727 1248 aa16.09■□□□□ 0.17
COPS7A-211ENST00000540408 TRPA1O75762 1119 aa16.09■□□□□ 0.17
COPS7A-211ENST00000540408 USP17L8P0C7I0 530 aa16.09■□□□□ 0.17
COPS7A-211ENST00000540408 ANGEL2Q5VTE6 544 aaKnown RBP16.09■□□□□ 0.17
COPS7A-211ENST00000540408 CDCA5Q96FF9 252 aa16.09■□□□□ 0.17
COPS7A-211ENST00000540408 CCDC85AQ96PX6 553 aaPredicted RBP16.09■□□□□ 0.17
COPS7A-211ENST00000540408 CDC5LQ99459 802 aaKnown RBP16.09■□□□□ 0.17
COPS7A-211ENST00000540408 METTL22Q9BUU2 404 aaPredicted RBP16.09■□□□□ 0.17
COPS7A-211ENST00000540408 USP17L3A6NCW0 530 aa16.08■□□□□ 0.16
COPS7A-211ENST00000540408 USP17L4A6NCW7 530 aa16.08■□□□□ 0.16
COPS7A-211ENST00000540408 SLC10A3P09131 477 aa16.08■□□□□ 0.16
COPS7A-211ENST00000540408 ZNF280AP59817 542 aaPredicted RBP16.08■□□□□ 0.16
COPS7A-211ENST00000540408 FKBP1BP68106 108 aa16.08■□□□□ 0.16
COPS7A-211ENST00000540408 USP17L1Q7RTZ2 530 aa16.08■□□□□ 0.16
COPS7A-211ENST00000540408 MYOZ2Q9NPC6 264 aa16.08■□□□□ 0.16
COPS7A-211ENST00000540408 RNF186Q9NXI6 227 aa16.08■□□□□ 0.16
COPS7A-211ENST00000540408 NEXNQ0ZGT2 675 aa16.07■□□□□ 0.16
COPS7A-211ENST00000540408 JARID2Q92833 1246 aaPredicted RBP16.07■□□□□ 0.16
COPS7A-211ENST00000540408 CSRNP1Q96S65 589 aa16.07■□□□□ 0.16
COPS7A-211ENST00000540408 POLR2AP24928 1970 aaKnown RBP16.07■□□□□ 0.16
COPS7A-211ENST00000540408 PITPNM2Q9BZ72 1349 aa16.06■□□□□ 0.16
COPS7A-211ENST00000540408 OGFOD1Q8N543 542 aa16.06■□□□□ 0.16
COPS7A-211ENST00000540408 C8orf58Q8NAV2 365 aa16.06■□□□□ 0.16
COPS7A-211ENST00000540408 MAP3K2Q9Y2U5 619 aa16.06■□□□□ 0.16
COPS7A-211ENST00000540408 ASTN2O75129 1339 aaPredicted RBP16.05■□□□□ 0.16
COPS7A-211ENST00000540408 CTSWP56202 376 aa16.05■□□□□ 0.16
COPS7A-211ENST00000540408 KSR2Q6VAB6 950 aa16.05■□□□□ 0.16
COPS7A-211ENST00000540408 STK31Q9BXU1 1019 aa16.05■□□□□ 0.16
COPS7A-211ENST00000540408 PRKRIP1Q9H875 184 aaPredicted RBP16.05■□□□□ 0.16
COPS7A-211ENST00000540408 ZNF609O15014 1411 aa16.04■□□□□ 0.16
COPS7A-211ENST00000540408 SLC34A2O95436 690 aa16.04■□□□□ 0.16
COPS7A-211ENST00000540408 GMLQ99445 158 aa16.04■□□□□ 0.16
COPS7A-211ENST00000540408 BSDC1Q9NW68 430 aaPredicted RBP16.04■□□□□ 0.16
COPS7A-211ENST00000540408 COL4A1P02462 1669 aa16.04■□□□□ 0.16
COPS7A-211ENST00000540408 PI4KAP2A4QPH2 592 aa16.03■□□□□ 0.16
COPS7A-211ENST00000540408 NF2P35240 595 aa16.03■□□□□ 0.16
COPS7A-211ENST00000540408 MMP14P50281 582 aa16.03■□□□□ 0.16
COPS7A-211ENST00000540408 RASAL3Q86YV0 1011 aa16.03■□□□□ 0.16
COPS7A-211ENST00000540408 PI4KAP1Q8N8J0 262 aa16.03■□□□□ 0.16
COPS7A-211ENST00000540408 TTLL11Q8NHH1 800 aa16.03■□□□□ 0.16
COPS7A-211ENST00000540408 FBXW7Q969H0 707 aa16.03■□□□□ 0.16
COPS7A-211ENST00000540408 MINPP1Q9UNW1 487 aa16.03■□□□□ 0.16
COPS7A-211ENST00000540408 SCN9AQ15858 1988 aa16.02■□□□□ 0.16
COPS7A-211ENST00000540408 MYO3BQ8WXR4 1341 aa16.02■□□□□ 0.16
COPS7A-211ENST00000540408 TTLL12Q14166 644 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms