RNA–Protein interactions for RNA: ENST00000540128.1

TRIM65-202, Transcript of tripartite motif containing 65, humanhuman

TSL 3

Gene TRIM65, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-202ENST00000540128 PDE3AQ14432 1141 aa27.65■■■□□ 2.02
TRIM65-202ENST00000540128 ANKIB1Q9P2G1 1089 aa27.65■■■□□ 2.02
TRIM65-202ENST00000540128 XDHP47989 1333 aa27.65■■■□□ 2.02
TRIM65-202ENST00000540128 KIAA2012Q0VF49 1180 aa27.64■■■□□ 2.02
TRIM65-202ENST00000540128 ITPRIPQ8IWB1 547 aa27.64■■■□□ 2.02
TRIM65-202ENST00000540128 ZNF594Q96JF6 807 aaPredicted RBP27.64■■■□□ 2.02
TRIM65-202ENST00000540128 ANKRD2Q9GZV1 360 aa27.64■■■□□ 2.02
TRIM65-202ENST00000540128 DUOX1Q9NRD9 1551 aa27.64■■■□□ 2.01
TRIM65-202ENST00000540128 LTBP1Q14766 1721 aa27.64■■■□□ 2.01
TRIM65-202ENST00000540128 GNAI2P04899 355 aa27.63■■■□□ 2.01
TRIM65-202ENST00000540128 RFX5P48382 616 aaPredicted RBP27.63■■■□□ 2.01
TRIM65-202ENST00000540128 TAF7LQ5H9L4 462 aa27.63■■■□□ 2.01
TRIM65-202ENST00000540128 LDHAL6AQ6ZMR3 332 aa27.63■■■□□ 2.01
TRIM65-202ENST00000540128 ZNF784Q8NCA9 323 aaPredicted RBP27.63■■■□□ 2.01
TRIM65-202ENST00000540128 GGA1Q9UJY5 639 aa27.63■■■□□ 2.01
TRIM65-202ENST00000540128 PPIP5K2O43314 1243 aa27.62■■■□□ 2.01
TRIM65-202ENST00000540128 ATP2B4P23634 1241 aa27.62■■■□□ 2.01
TRIM65-202ENST00000540128 MTX1Q13505 466 aa27.62■■■□□ 2.01
TRIM65-202ENST00000540128 LARGE2Q8N3Y3 721 aa27.62■■■□□ 2.01
TRIM65-202ENST00000540128 C6orf229H3BNL8 230 aa27.61■■■□□ 2.01
TRIM65-202ENST00000540128 FZD9O00144 591 aa27.61■■■□□ 2.01
TRIM65-202ENST00000540128 CHRNDQ07001 517 aa27.61■■■□□ 2.01
TRIM65-202ENST00000540128 JDP2Q8WYK2 163 aa27.61■■■□□ 2.01
TRIM65-202ENST00000540128 EYA3Q99504 573 aa27.61■■■□□ 2.01
TRIM65-202ENST00000540128 MVPQ14764 893 aaKnown RBP27.6■■■□□ 2.01
TRIM65-202ENST00000540128 AOC3Q16853 763 aa27.6■■■□□ 2.01
TRIM65-202ENST00000540128 WASHC4Q2M389 1173 aa27.6■■■□□ 2.01
TRIM65-202ENST00000540128 LEMD3Q9Y2U8 911 aa27.6■■■□□ 2.01
TRIM65-202ENST00000540128 RIPOR2Q9Y4F9 1068 aa27.6■■■□□ 2.01
TRIM65-202ENST00000540128 GLTPD2A6NH11 291 aa27.59■■■□□ 2.01
TRIM65-202ENST00000540128 UFL1O94874 794 aa27.59■■■□□ 2.01
TRIM65-202ENST00000540128 PUS3Q9BZE2 481 aaKnown RBP27.58■■■□□ 2.01
TRIM65-202ENST00000540128 CNNM1Q9NRU3 951 aa27.58■■■□□ 2.01
TRIM65-202ENST00000540128 COL4A5P29400 1685 aa27.58■■■□□ 2.01
TRIM65-202ENST00000540128 PTPN12Q05209 780 aaKnown RBP27.57■■■□□ 2
TRIM65-202ENST00000540128 C20orf194Q5TEA3 1177 aa27.57■■■□□ 2
TRIM65-202ENST00000540128 NIM1KQ8IY84 436 aa27.57■■■□□ 2
TRIM65-202ENST00000540128 ZC3H12CQ9C0D7 883 aaKnown RBP27.57■■■□□ 2
TRIM65-202ENST00000540128 FBXO3Q9UK99 471 aa27.57■■■□□ 2
TRIM65-202ENST00000540128 DDX19BQ9UMR2 479 aa27.57■■■□□ 2
TRIM65-202ENST00000540128 DPY19L2Q6NUT2 758 aa27.56■■■□□ 2
TRIM65-202ENST00000540128 ZNRF3Q9ULT6 936 aa27.56■■■□□ 2
TRIM65-202ENST00000540128 COG6Q9Y2V7 657 aa27.56■■■□□ 2
TRIM65-202ENST00000540128 SPEF2Q9C093 1822 aa27.55■■■□□ 2
TRIM65-202ENST00000540128 WTIPA6NIX2 430 aaPredicted RBP27.55■■■□□ 2
TRIM65-202ENST00000540128 KLHDC4Q8TBB5 520 aa27.55■■■□□ 2
TRIM65-202ENST00000540128 COPRSQ9NQ92 184 aa27.55■■■□□ 2
TRIM65-202ENST00000540128 ZNF804BA4D1E1 1349 aa27.54■■■□□ 2
TRIM65-202ENST00000540128 EYA2O00167 538 aa27.54■■■□□ 2
TRIM65-202ENST00000540128 MROH5Q6ZUA9 1318 aa27.54■■■□□ 2
TRIM65-202ENST00000540128 TIAM2Q8IVF5 1701 aa27.54■■■□□ 2
TRIM65-202ENST00000540128 KDM2BQ8NHM5 1336 aa27.54■■■□□ 2
TRIM65-202ENST00000540128 GPR101Q96P66 508 aaPredicted RBP27.54■■■□□ 2
TRIM65-202ENST00000540128 RIMBP2O15034 1052 aa27.53■■■□□ 2
TRIM65-202ENST00000540128 SRGAP3O43295 1099 aa27.53■■■□□ 2
TRIM65-202ENST00000540128 TAF5LO75529 589 aa27.53■■■□□ 2
TRIM65-202ENST00000540128 CIAO1O76071 339 aa27.53■■■□□ 2
TRIM65-202ENST00000540128 RRP1P56182 461 aaKnown RBP27.53■■■□□ 2
TRIM65-202ENST00000540128 LRRC24Q50LG9 513 aa27.53■■■□□ 2
TRIM65-202ENST00000540128 C15orf52Q6ZUT6 534 aaKnown RBP27.53■■■□□ 2
TRIM65-202ENST00000540128 HELBQ8NG08 1087 aaPredicted RBP27.53■■■□□ 2
TRIM65-202ENST00000540128 CHMP4BQ9H444 224 aaKnown RBP27.53■■■□□ 2
TRIM65-202ENST00000540128 MED23Q9ULK4 1368 aa27.52■■■□□ 2
TRIM65-202ENST00000540128 ZNF541Q9H0D2 1346 aa27.52■■■□□ 2
TRIM65-202ENST00000540128 EIF6P56537 245 aaKnown RBP27.52■■■□□ 2
TRIM65-202ENST00000540128 ATP8B2P98198 1209 aa27.52■■■□□ 2
TRIM65-202ENST00000540128 GPBP1L1Q9HC44 474 aaPredicted RBP27.52■■■□□ 2
TRIM65-202ENST00000540128 ZBTB40Q9NUA8 1239 aa27.52■■■□□ 2
TRIM65-202ENST00000540128 ATG9AQ7Z3C6 839 aa27.51■■□□□ 1.99
TRIM65-202ENST00000540128 IRS2Q9Y4H2 1338 aa27.5■■□□□ 1.99
TRIM65-202ENST00000540128 DDNO94850 711 aaPredicted RBP27.5■■□□□ 1.99
TRIM65-202ENST00000540128 VGLL2Q8N8G2 317 aa27.5■■□□□ 1.99
TRIM65-202ENST00000540128 ZNF526Q8TF50 670 aaPredicted RBP27.5■■□□□ 1.99
TRIM65-202ENST00000540128 PNMA6EA0A0J9YXQ4 647 aa27.49■■□□□ 1.99
TRIM65-202ENST00000540128 YDJCA8MPS7 323 aa27.49■■□□□ 1.99
TRIM65-202ENST00000540128 KCNJ4P48050 445 aa27.49■■□□□ 1.99
TRIM65-202ENST00000540128 CXCL9Q07325 125 aa27.49■■□□□ 1.99
TRIM65-202ENST00000540128 UBE4AQ14139 1066 aa27.49■■□□□ 1.99
TRIM65-202ENST00000540128 POLA2Q14181 598 aa27.49■■□□□ 1.99
TRIM65-202ENST00000540128 GPC2Q8N158 579 aa27.49■■□□□ 1.99
TRIM65-202ENST00000540128 SSH3Q8TE77 659 aa27.49■■□□□ 1.99
TRIM65-202ENST00000540128 L3MBTL3Q96JM7 780 aaPredicted RBP27.49■■□□□ 1.99
TRIM65-202ENST00000540128 C1orf115Q9H7X2 142 aa27.49■■□□□ 1.99
TRIM65-202ENST00000540128 SNAP23O00161 211 aa27.48■■□□□ 1.99
TRIM65-202ENST00000540128 DOK7Q18PE1 504 aa27.48■■□□□ 1.99
TRIM65-202ENST00000540128 TXNRD3Q86VQ6 643 aa27.48■■□□□ 1.99
TRIM65-202ENST00000540128 DBNDD1Q9H9R9 158 aa27.48■■□□□ 1.99
TRIM65-202ENST00000540128 PA2G4Q9UQ80 394 aaKnown RBP27.48■■□□□ 1.99
TRIM65-202ENST00000540128 ECE2O60344 883 aa27.47■■□□□ 1.99
TRIM65-202ENST00000540128 PDE8BO95263 885 aa27.47■■□□□ 1.99
TRIM65-202ENST00000540128 METTL24Q5JXM2 366 aa27.47■■□□□ 1.99
TRIM65-202ENST00000540128 KLRK1P26718 216 aa27.46■■□□□ 1.99
TRIM65-202ENST00000540128 IL15P40933 162 aaPredicted RBP27.46■■□□□ 1.99
TRIM65-202ENST00000540128 CEP85Q6P2H3 762 aa27.46■■□□□ 1.99
TRIM65-202ENST00000540128 PODNQ7Z5L7 613 aa27.46■■□□□ 1.99
TRIM65-202ENST00000540128 COA1Q9GZY4 146 aa27.46■■□□□ 1.99
TRIM65-202ENST00000540128 NMRK2Q9NPI5 230 aa27.46■■□□□ 1.99
TRIM65-202ENST00000540128 POTECB2RU33 542 aa27.45■■□□□ 1.98
TRIM65-202ENST00000540128 TNIP1Q15025 636 aa27.45■■□□□ 1.98
TRIM65-202ENST00000540128 CIAPIN1Q6FI81 312 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms