RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 GRAPQ13588 217 aa23.41■■□□□ 1.34
TNFRSF1A-213ENST00000540022 ANKRD45Q5TZF3 282 aa23.41■■□□□ 1.34
TNFRSF1A-213ENST00000540022 SLC51AQ86UW1 340 aa23.41■■□□□ 1.34
TNFRSF1A-213ENST00000540022 GRAPLQ8TC17 118 aaPredicted RBP23.41■■□□□ 1.34
TNFRSF1A-213ENST00000540022 ZNF622Q969S3 477 aaKnown RBP eCLIP23.41■■□□□ 1.34
TNFRSF1A-213ENST00000540022 FBXO3Q9UK99 471 aa23.41■■□□□ 1.34
TNFRSF1A-213ENST00000540022 SASH1O94885 1247 aa23.4■■□□□ 1.34
TNFRSF1A-213ENST00000540022 NPR1P16066 1061 aa23.4■■□□□ 1.34
TNFRSF1A-213ENST00000540022 RHPN1Q8TCX5 695 aa23.4■■□□□ 1.34
TNFRSF1A-213ENST00000540022 CRAMP1Q96RY5 1269 aa23.4■■□□□ 1.34
TNFRSF1A-213ENST00000540022 MPHOSPH8Q99549 860 aa23.4■■□□□ 1.34
TNFRSF1A-213ENST00000540022 RIPOR2Q9Y4F9 1068 aa23.4■■□□□ 1.34
TNFRSF1A-213ENST00000540022 MASTLQ96GX5 879 aa23.39■■□□□ 1.34
TNFRSF1A-213ENST00000540022 CNNM1Q9NRU3 951 aa23.39■■□□□ 1.34
TNFRSF1A-213ENST00000540022 PDZRN3Q9UPQ7 1066 aa23.39■■□□□ 1.34
TNFRSF1A-213ENST00000540022 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.39■■□□□ 1.34
TNFRSF1A-213ENST00000540022 SMARCA5O60264 1052 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF1A-213ENST00000540022 IL15P40933 162 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF1A-213ENST00000540022 NUCB1Q02818 461 aa23.38■■□□□ 1.33
TNFRSF1A-213ENST00000540022 KIF1BPQ96EK5 621 aa23.38■■□□□ 1.33
TNFRSF1A-213ENST00000540022 LRRCC1Q9C099 1032 aa23.38■■□□□ 1.33
TNFRSF1A-213ENST00000540022 STYK1Q6J9G0 422 aa23.38■■□□□ 1.33
TNFRSF1A-213ENST00000540022 ERC1Q8IUD2 1116 aa23.38■■□□□ 1.33
TNFRSF1A-213ENST00000540022 BSDC1Q9NW68 430 aaPredicted RBP23.38■■□□□ 1.33
TNFRSF1A-213ENST00000540022 SBF1O95248 1867 aa23.37■■□□□ 1.33
TNFRSF1A-213ENST00000540022 DALRD3Q5D0E6 543 aaKnown RBP23.37■■□□□ 1.33
TNFRSF1A-213ENST00000540022 CHD1LQ86WJ1 897 aa23.37■■□□□ 1.33
TNFRSF1A-213ENST00000540022 CACNA1SQ13698 1873 aa23.36■■□□□ 1.33
TNFRSF1A-213ENST00000540022 TFCP2Q12800 502 aa23.36■■□□□ 1.33
TNFRSF1A-213ENST00000540022 LNPKQ9C0E8 428 aa23.36■■□□□ 1.33
TNFRSF1A-213ENST00000540022 IL1RAPL2Q9NP60 686 aa23.36■■□□□ 1.33
TNFRSF1A-213ENST00000540022 ALDH1B1P30837 517 aa23.35■■□□□ 1.33
TNFRSF1A-213ENST00000540022 BCL11AQ9H165 835 aa23.35■■□□□ 1.33
TNFRSF1A-213ENST00000540022 BBOX1O75936 387 aa23.34■■□□□ 1.33
TNFRSF1A-213ENST00000540022 SKAP1Q86WV1 359 aa23.34■■□□□ 1.33
TNFRSF1A-213ENST00000540022 TTLL6Q8N841 843 aa23.34■■□□□ 1.33
TNFRSF1A-213ENST00000540022 MINPP1Q9UNW1 487 aa23.34■■□□□ 1.33
TNFRSF1A-213ENST00000540022 METTL24Q5JXM2 366 aa23.33■■□□□ 1.33
TNFRSF1A-213ENST00000540022 PRPF40BQ6NWY9 871 aaKnown RBP23.33■■□□□ 1.33
TNFRSF1A-213ENST00000540022 OLFM4Q6UX06 510 aa23.33■■□□□ 1.33
TNFRSF1A-213ENST00000540022 ARHGAP27Q6ZUM4 889 aa23.33■■□□□ 1.33
TNFRSF1A-213ENST00000540022 VGLL2Q8N8G2 317 aa23.33■■□□□ 1.33
TNFRSF1A-213ENST00000540022 CEP126Q9P2H0 1117 aa23.33■■□□□ 1.33
TNFRSF1A-213ENST00000540022 ZNF219Q9P2Y4 722 aaPredicted RBP23.33■■□□□ 1.33
TNFRSF1A-213ENST00000540022 MROH5Q6ZUA9 1318 aa23.33■■□□□ 1.33
TNFRSF1A-213ENST00000540022 TAF1P21675 1872 aa23.33■■□□□ 1.32
TNFRSF1A-213ENST00000540022 CCDC88AQ3V6T2 1871 aa23.33■■□□□ 1.32
TNFRSF1A-213ENST00000540022 CHRNDQ07001 517 aa23.33■■□□□ 1.32
TNFRSF1A-213ENST00000540022 HELBQ8NG08 1087 aaPredicted RBP23.33■■□□□ 1.32
TNFRSF1A-213ENST00000540022 ZBTB47Q9UFB7 747 aaPredicted RBP23.33■■□□□ 1.32
TNFRSF1A-213ENST00000540022 C16orf71Q8IYS4 520 aaPredicted RBP23.32■■□□□ 1.32
TNFRSF1A-213ENST00000540022 CNKSR1Q969H4 720 aa23.32■■□□□ 1.32
TNFRSF1A-213ENST00000540022 PPEF1O14829 653 aaPredicted RBP23.31■■□□□ 1.32
TNFRSF1A-213ENST00000540022 PDE4AP27815 886 aa23.31■■□□□ 1.32
TNFRSF1A-213ENST00000540022 TAF5LO75529 589 aa23.3■■□□□ 1.32
TNFRSF1A-213ENST00000540022 PDE8BO95263 885 aa23.3■■□□□ 1.32
TNFRSF1A-213ENST00000540022 CLASRPQ8N2M8 674 aaKnown RBP23.3■■□□□ 1.32
TNFRSF1A-213ENST00000540022 EAF2Q96CJ1 260 aaPredicted RBP23.3■■□□□ 1.32
TNFRSF1A-213ENST00000540022 SLX4Q8IY92 1834 aa23.3■■□□□ 1.32
TNFRSF1A-213ENST00000540022 TNNI3KQ59H18 835 aa23.29■■□□□ 1.32
TNFRSF1A-213ENST00000540022 TMC4Q7Z404 712 aa23.29■■□□□ 1.32
TNFRSF1A-213ENST00000540022 C7orf43Q8WVR3 580 aa23.29■■□□□ 1.32
TNFRSF1A-213ENST00000540022 GPR108Q9NPR9 543 aa23.29■■□□□ 1.32
TNFRSF1A-213ENST00000540022 FPGT-TNNI3KV9GXZ4 949 aa23.29■■□□□ 1.32
TNFRSF1A-213ENST00000540022 C21orf2O43822 256 aa23.28■■□□□ 1.32
TNFRSF1A-213ENST00000540022 SP8Q8IXZ3 490 aa23.28■■□□□ 1.32
TNFRSF1A-213ENST00000540022 OTUD7AQ8TE49 926 aaPredicted RBP23.28■■□□□ 1.32
TNFRSF1A-213ENST00000540022 ATP6V0A2Q9Y487 856 aa23.28■■□□□ 1.32
TNFRSF1A-213ENST00000540022 SNAP23O00161 211 aa23.28■■□□□ 1.32
TNFRSF1A-213ENST00000540022 AACSQ86V21 672 aa23.28■■□□□ 1.32
TNFRSF1A-213ENST00000540022 ANKRD2Q9GZV1 360 aa23.27■■□□□ 1.32
TNFRSF1A-213ENST00000540022 CCDC8Q9H0W5 538 aaPredicted RBP23.27■■□□□ 1.32
TNFRSF1A-213ENST00000540022 AKAP2Q9Y2D5 859 aa23.27■■□□□ 1.32
TNFRSF1A-213ENST00000540022 SPEF2Q9C093 1822 aa23.26■■□□□ 1.31
TNFRSF1A-213ENST00000540022 FER1L6Q2WGJ9 1857 aa23.26■■□□□ 1.31
TNFRSF1A-213ENST00000540022 A0A1B0GUL7 405 aa23.26■■□□□ 1.31
TNFRSF1A-213ENST00000540022 WTIPA6NIX2 430 aaPredicted RBP23.26■■□□□ 1.31
TNFRSF1A-213ENST00000540022 TIMM10P62072 90 aa23.26■■□□□ 1.31
TNFRSF1A-213ENST00000540022 ZNF609O15014 1411 aa23.26■■□□□ 1.31
TNFRSF1A-213ENST00000540022 FGFR2P21802 821 aa23.25■■□□□ 1.31
TNFRSF1A-213ENST00000540022 GPSM2P81274 684 aa23.25■■□□□ 1.31
TNFRSF1A-213ENST00000540022 ATP2B3Q16720 1220 aa23.25■■□□□ 1.31
TNFRSF1A-213ENST00000540022 TLR7Q9NYK1 1049 aaKnown RBP23.25■■□□□ 1.31
TNFRSF1A-213ENST00000540022 RGS3P49796 1198 aa23.24■■□□□ 1.31
TNFRSF1A-213ENST00000540022 PUM3Q15397 648 aaKnown RBP23.24■■□□□ 1.31
TNFRSF1A-213ENST00000540022 NEUROD6Q96NK8 337 aa23.24■■□□□ 1.31
TNFRSF1A-213ENST00000540022 SALL3Q9BXA9 1300 aa23.24■■□□□ 1.31
TNFRSF1A-213ENST00000540022 XDHP47989 1333 aa23.23■■□□□ 1.31
TNFRSF1A-213ENST00000540022 IFIT2P09913 472 aaKnown RBP23.23■■□□□ 1.31
TNFRSF1A-213ENST00000540022 LPIN2Q92539 896 aa23.23■■□□□ 1.31
TNFRSF1A-213ENST00000540022 DBNDD2Q9BQY9 259 aa23.23■■□□□ 1.31
TNFRSF1A-213ENST00000540022 ANKIB1Q9P2G1 1089 aa23.23■■□□□ 1.31
TNFRSF1A-213ENST00000540022 DBNLQ9UJU6 430 aaKnown RBP23.23■■□□□ 1.31
TNFRSF1A-213ENST00000540022 NSFL1CQ9UNZ2 370 aaKnown RBP23.23■■□□□ 1.31
TNFRSF1A-213ENST00000540022 PLEKHM2Q8IWE5 1019 aa23.23■■□□□ 1.31
TNFRSF1A-213ENST00000540022 UBE4AQ14139 1066 aa23.22■■□□□ 1.31
TNFRSF1A-213ENST00000540022 C9orf131Q5VYM1 1079 aa23.22■■□□□ 1.31
TNFRSF1A-213ENST00000540022 ZNF526Q8TF50 670 aaPredicted RBP23.22■■□□□ 1.31
TNFRSF1A-213ENST00000540022 PODXL2Q9NZ53 605 aa23.22■■□□□ 1.31
TNFRSF1A-213ENST00000540022 DICER1Q9UPY3 1922 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms