RNA–Protein interactions for RNA: ENST00000539784.1

TSPAN9-IT1-201, TSPAN9 intronic transcript 1, humanhuman

TSL 4 BASIC

Gene TSPAN9-IT1, Length 562 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-IT1-201ENST00000539784 GCKRQ14397 625 aa16.27■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 TTLL11Q8NHH1 800 aa16.27■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 CDC5LQ99459 802 aaKnown RBP16.27■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 ZC3H12CQ9C0D7 883 aaKnown RBP16.27■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 GREM2Q9H772 168 aa16.27■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 ZBTB12Q9Y330 459 aaPredicted RBP16.27■□□□□ 0.2
TSPAN9-IT1-201ENST00000539784 SHTN1A0MZ66 631 aa16.26■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 F6X3S4 739 aa16.26■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 PSMD14O00487 310 aa16.26■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 KCNQ5Q9NR82 932 aa16.26■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 PODXL2Q9NZ53 605 aa16.26■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 CNOT7Q9UIV1 285 aaKnown RBP16.26■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 CNTNAP1P78357 1384 aa16.26■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 SPEF2Q9C093 1822 aa16.25■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 H7C1W4 665 aa16.25■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 TRAF5O00463 557 aa16.25■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 MICALL2Q8IY33 904 aa16.25■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 LINS1Q8NG48 757 aa16.25■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 XDHP47989 1333 aa16.24■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 MYH3P11055 1940 aa16.24■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 H7C1D1 291 aa16.24■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 HSPA1AP0DMV8 641 aaKnown RBP16.24■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 HSPA1BP0DMV9 641 aaKnown RBP16.24■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 TRPM4Q8TD43 1214 aa16.24■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 ABT1Q9ULW3 272 aaKnown RBP16.24■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 RTL9Q8NET4 1388 aa16.24■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 FAM161AQ3B820 660 aa16.23■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 WTIPA6NIX2 430 aaPredicted RBP16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 ITGA6P23229 1130 aa16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 ATP2B4P23634 1241 aa16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 IGHMBP2P38935 993 aaKnown RBP16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 VEGFBP49765 207 aa16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 HIRAP54198 1017 aaPredicted RBP16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 CASP7P55210 303 aa16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 SAMD7Q7Z3H4 446 aa16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 GLIS2Q9BZE0 524 aaPredicted RBP16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 BSDC1Q9NW68 430 aaPredicted RBP16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 MINPP1Q9UNW1 487 aa16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 CACNA1FO60840 1977 aa16.22■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 ZNF521Q96K83 1311 aa16.21■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 TBC1D10BQ4KMP7 808 aaPredicted RBP16.21■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 RBM26Q5T8P6 1007 aaKnown RBP16.21■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 SLC4A10Q6U841 1118 aa16.21■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 PAXIP1Q6ZW49 1069 aaPredicted RBP16.21■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 DPF2Q92785 391 aa16.21■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 CHMP3Q9Y3E7 222 aa16.21■□□□□ 0.19
TSPAN9-IT1-201ENST00000539784 RPS12P25398 132 aaKnown RBP16.2■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 GRM1Q13255 1194 aa16.2■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 DEFB115Q30KQ5 88 aa16.2■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 BEND3Q5T5X7 828 aa16.2■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 IFFO2Q5TF58 517 aa16.2■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 MPHOSPH8Q99549 860 aa16.2■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 PLA2G12BQ9BX93 195 aa16.2■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 ZNF408Q9H9D4 720 aa16.2■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 SCN9AQ15858 1988 aa16.19■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 EGFRP00533 1210 aa16.19■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 CCT4P50991 539 aaKnown RBP16.19■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 COL13A1Q5TAT6 717 aaPredicted RBP16.19■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 RASSF10A6NK89 507 aa16.18■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 CELF2O95319 508 aaKnown RBP16.18■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 CSF1RP07333 972 aa16.18■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 VIL1P09327 827 aaKnown RBP16.18■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 CST9Q5W186 159 aa16.18■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 ZC3H15Q8WU90 426 aaKnown RBP16.18■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 FBXW7Q969H0 707 aa16.18■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 ANKRD18BA2A2Z9 1011 aa16.17■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 KIF4BQ2VIQ3 1234 aa16.17■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 DLK2Q6UY11 383 aa16.17■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 USP48Q86UV5 1035 aa16.17■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 C9orf78Q9NZ63 289 aaPredicted RBP16.17■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 PGAP2Q9UHJ9 254 aa16.17■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 WDR33Q9C0J8 1336 aaKnown RBP16.17■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 TRPM7Q96QT4 1865 aa16.16■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 MED23Q9ULK4 1368 aa16.16■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 E9PSI1 815 aa16.16■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 GRM8O00222 908 aa16.16■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 KCNJ4P48050 445 aa16.16■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 FOXO4P98177 505 aa16.16■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 IFIT5Q13325 482 aaKnown RBP16.16■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 RSBN1LQ6PCB5 846 aaPredicted RBP16.16■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 CDC37L1Q7L3B6 337 aa16.16■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 SRCIN1Q9C0H9 1055 aa16.16■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 USP17L3A6NCW0 530 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 USP17L4A6NCW7 530 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 CHRNDQ07001 517 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 EPHA10Q5JZY3 1008 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 CYP4F22Q6NT55 531 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 LMBR1LQ6UX01 489 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 USP17L1Q7RTZ2 530 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 PODNQ7Z5L7 613 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 AIDAQ96BJ3 306 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 DCPSQ96C86 337 aaKnown RBP16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 ANKRD2Q9GZV1 360 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 LEMD3Q9Y2U8 911 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 TLL2Q9Y6L7 1015 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 ZNF804BA4D1E1 1349 aa16.15■□□□□ 0.18
TSPAN9-IT1-201ENST00000539784 FOXN1O15353 648 aa16.14■□□□□ 0.17
TSPAN9-IT1-201ENST00000539784 ALDH1L1O75891 902 aa16.14■□□□□ 0.17
TSPAN9-IT1-201ENST00000539784 KLRK1P26718 216 aa16.14■□□□□ 0.17
TSPAN9-IT1-201ENST00000539784 TAF7LQ5H9L4 462 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms