RNA–Protein interactions for RNA: ENST00000539610.1

MAP3K4-209, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 3

Gene MAP3K4, Length 295 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-209	ENST00000539610	LINC01387	J3KSC0	135 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	TM4SF5	O14894	197 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	SART1	O43290	800 aa	Known RBP	4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	GHRH	P01286	108 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	INPP5B	P32019	993 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	SEMA3F	Q13275	785 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	KSR1	Q8IVT5	923 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	CACTIN-AS1	Q8N1I8	211 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	NGLY1	Q96IV0	654 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	OSBPL1A	Q9BXW6	950 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	C11orf16	Q9NQ32	467 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	TRIM33	Q9UPN9	1127 aa		4.25	□□□□□ -1.73
MAP3K4-209	ENST00000539610	ZBTB7B	O15156	539 aa	Predicted RBP	4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	C21orf2	O43822	256 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	SKI	P12755	728 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	PREP	P48147	710 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	IDH3A	P50213	366 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	NCOA4	Q13772	614 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	DUOXA2	Q1HG44	320 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	TMEM132A	Q24JP5	1023 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	FBXL6	Q8N531	539 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	FLCN	Q8NFG4	579 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	TPCN2	Q8NHX9	752 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	C2orf49	Q9BVC5	232 aa	Predicted RBP	4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	PAK6	Q9NQU5	681 aa	Predicted RBP	4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	BSDC1	Q9NW68	430 aa	Predicted RBP	4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	HIF3A	Q9Y2N7	669 aa		4.24	□□□□□ -1.73
MAP3K4-209	ENST00000539610	CPSF6	Q16630	551 aa	Known RBP eCLIP	4.23	□□□□□ -1.73
MAP3K4-209	ENST00000539610	TXNDC11	Q6PKC3	985 aa		4.23	□□□□□ -1.73
MAP3K4-209	ENST00000539610	CILP2	Q8IUL8	1156 aa		4.23	□□□□□ -1.73
MAP3K4-209	ENST00000539610	STAG2	Q8N3U4	1231 aa		4.23	□□□□□ -1.73
MAP3K4-209	ENST00000539610	SLC38A3	Q99624	504 aa		4.23	□□□□□ -1.73
MAP3K4-209	ENST00000539610	PRM3	Q9NNZ6	103 aa		4.23	□□□□□ -1.73
MAP3K4-209	ENST00000539610	BIN1	O00499	593 aa		4.22	□□□□□ -1.73
MAP3K4-209	ENST00000539610	ARSD	P51689	593 aa		4.22	□□□□□ -1.73
MAP3K4-209	ENST00000539610	RTN1	Q16799	776 aa		4.22	□□□□□ -1.73
MAP3K4-209	ENST00000539610	CCDC102B	Q68D86	513 aa		4.22	□□□□□ -1.73
MAP3K4-209	ENST00000539610	SHISA5	Q8N114	240 aa		4.22	□□□□□ -1.73
MAP3K4-209	ENST00000539610	NSUN5	Q96P11	429 aa	Known RBP	4.22	□□□□□ -1.73
MAP3K4-209	ENST00000539610	RBSN	Q9H1K0	784 aa		4.22	□□□□□ -1.73
MAP3K4-209	ENST00000539610	KIAA1024	Q9UPX6	916 aa		4.22	□□□□□ -1.73
MAP3K4-209	ENST00000539610	JAG2	Q9Y219	1238 aa		4.22	□□□□□ -1.73
MAP3K4-209	ENST00000539610	ATAD2	Q6PL18	1390 aa		4.22	□□□□□ -1.73
MAP3K4-209	ENST00000539610		M0R2N6	131 aa		4.21	□□□□□ -1.74
MAP3K4-209	ENST00000539610	DDX3Y	O15523	660 aa	Known RBP	4.21	□□□□□ -1.74
MAP3K4-209	ENST00000539610	CYP26A1	O43174	497 aa		4.21	□□□□□ -1.74
MAP3K4-209	ENST00000539610	PSAP	P07602	524 aa		4.21	□□□□□ -1.74
MAP3K4-209	ENST00000539610	MAP4	P27816	1152 aa	Known RBP	4.21	□□□□□ -1.74
MAP3K4-209	ENST00000539610	SOX11	P35716	441 aa		4.21	□□□□□ -1.74
MAP3K4-209	ENST00000539610	ANKRD34A	Q69YU3	496 aa		4.21	□□□□□ -1.74
MAP3K4-209	ENST00000539610	UBASH3B	Q8TF42	649 aa		4.21	□□□□□ -1.74
MAP3K4-209	ENST00000539610	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	4.21	□□□□□ -1.74
MAP3K4-209	ENST00000539610	CARD10	Q9BWT7	1032 aa		4.21	□□□□□ -1.74
MAP3K4-209	ENST00000539610	FSCN2	O14926	492 aa		4.2	□□□□□ -1.74
MAP3K4-209	ENST00000539610	ADAM11	O75078	769 aa		4.2	□□□□□ -1.74
MAP3K4-209	ENST00000539610	CFP	P27918	469 aa		4.2	□□□□□ -1.74
MAP3K4-209	ENST00000539610	WASHC4	Q2M389	1173 aa		4.2	□□□□□ -1.74
MAP3K4-209	ENST00000539610	TRIM50	Q86XT4	487 aa		4.2	□□□□□ -1.74
MAP3K4-209	ENST00000539610	DEPDC4	Q8N2C3	294 aa		4.2	□□□□□ -1.74
MAP3K4-209	ENST00000539610	KLHL23	Q8NBE8	558 aa		4.2	□□□□□ -1.74
MAP3K4-209	ENST00000539610	TSEN2	Q8NCE0	465 aa	Known RBP	4.2	□□□□□ -1.74
MAP3K4-209	ENST00000539610	METTL22	Q9BUU2	404 aa	Predicted RBP	4.2	□□□□□ -1.74
MAP3K4-209	ENST00000539610	MMP20	O60882	483 aa		4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	EGFR	P00533	1210 aa		4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	HOXD8	P13378	290 aa	Predicted RBP	4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	CDC25B	P30305	580 aa		4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	MESP2	Q0VG99	397 aa		4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	SGO2	Q562F6	1265 aa		4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	LCNL1	Q6ZST4	164 aa		4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	C1QL4	Q86Z23	238 aa		4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	GAS2L2	Q8NHY3	880 aa		4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	CHMP7	Q8WUX9	453 aa	Predicted RBP	4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	SCG3	Q8WXD2	468 aa	Known RBP	4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	FAM168A	Q92567	244 aa		4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	FAM84A	Q96KN4	292 aa		4.19	□□□□□ -1.74
MAP3K4-209	ENST00000539610	GAS2	O43903	313 aa	Known RBP	4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	RXRB	P28702	533 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	CDC27	P30260	824 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	SOX18	P35713	384 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	CLDN10	P78369	228 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	ZNF792	Q3KQV3	632 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	TTLL10	Q6ZVT0	673 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	NFATC2IP	Q8NCF5	419 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	TMEM40	Q8WWA1	233 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	KLHDC7B	Q96G42	594 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	TOX2	Q96NM4	488 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	LACRT	Q9GZZ8	138 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	RNF208	Q9H0X6	261 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	KLK14	Q9P0G3	267 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	USP20	Q9Y2K6	914 aa		4.18	□□□□□ -1.74
MAP3K4-209	ENST00000539610	USP17L5	A8MUK1	530 aa		4.17	□□□□□ -1.74
MAP3K4-209	ENST00000539610	XYLB	O75191	536 aa		4.17	□□□□□ -1.74
MAP3K4-209	ENST00000539610	MICAL2	O94851	1124 aa		4.17	□□□□□ -1.74
MAP3K4-209	ENST00000539610	ATP1A2	P50993	1020 aa		4.17	□□□□□ -1.74
MAP3K4-209	ENST00000539610	PLCL1	Q15111	1095 aa		4.17	□□□□□ -1.74
MAP3K4-209	ENST00000539610	FAM117B	Q6P1L5	589 aa		4.17	□□□□□ -1.74
MAP3K4-209	ENST00000539610	FDX2	Q6P4F2	183 aa		4.17	□□□□□ -1.74
MAP3K4-209	ENST00000539610	ATG4D	Q86TL0	474 aa	Predicted RBP	4.17	□□□□□ -1.74
MAP3K4-209	ENST00000539610	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	4.17	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 43 ms