RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 BCL11AQ9H165 835 aa11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.39□□□□□ -0.59
RTN4IP1-204ENST00000539449 IRS4O14654 1257 aaPredicted RBP11.38□□□□□ -0.59
RTN4IP1-204ENST00000539449 HCLS1P14317 486 aaPredicted RBP11.38□□□□□ -0.59
RTN4IP1-204ENST00000539449 RASSF7Q02833 373 aa11.38□□□□□ -0.59
RTN4IP1-204ENST00000539449 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
RTN4IP1-204ENST00000539449 CCDC85AQ96PX6 553 aaPredicted RBP11.38□□□□□ -0.59
RTN4IP1-204ENST00000539449 UTP14AQ9BVJ6 771 aaKnown RBP11.38□□□□□ -0.59
RTN4IP1-204ENST00000539449 PLA2G12BQ9BX93 195 aa11.38□□□□□ -0.59
RTN4IP1-204ENST00000539449 HDAC5Q9UQL6 1122 aa11.38□□□□□ -0.59
RTN4IP1-204ENST00000539449 ZNF652Q9Y2D9 606 aa11.38□□□□□ -0.59
RTN4IP1-204ENST00000539449 NOP58Q9Y2X3 529 aaKnown RBP11.38□□□□□ -0.59
RTN4IP1-204ENST00000539449 COL4A1P02462 1669 aa11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 RGL2O15211 777 aa11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 CSF1RP07333 972 aa11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 GYS1P13807 737 aa11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 PTPN12Q05209 780 aaKnown RBP11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 NFIXQ14938 502 aa11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 ERFEQ4G0M1 354 aa11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 PARP10Q53GL7 1025 aa11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 CCDC24Q8N4L8 307 aa11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 ZNF594Q96JF6 807 aaPredicted RBP11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 PARP3Q9Y6F1 533 aa11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 SPEF2Q9C093 1822 aa11.37□□□□□ -0.59
RTN4IP1-204ENST00000539449 SASH1O94885 1247 aa11.36□□□□□ -0.59
RTN4IP1-204ENST00000539449 LMNB1P20700 586 aa11.36□□□□□ -0.59
RTN4IP1-204ENST00000539449 C3orf67Q6ZVT6 689 aa11.36□□□□□ -0.59
RTN4IP1-204ENST00000539449 TTLL11Q8NHH1 800 aa11.36□□□□□ -0.59
RTN4IP1-204ENST00000539449 SIL1Q9H173 461 aa11.36□□□□□ -0.59
RTN4IP1-204ENST00000539449 IL1RAPL2Q9NP60 686 aa11.36□□□□□ -0.59
RTN4IP1-204ENST00000539449 CHMP3Q9Y3E7 222 aa11.36□□□□□ -0.59
RTN4IP1-204ENST00000539449 SH3TC1Q8TE82 1336 aa11.35□□□□□ -0.59
RTN4IP1-204ENST00000539449 PDE8AO60658 829 aa11.35□□□□□ -0.59
RTN4IP1-204ENST00000539449 TM4SF1P30408 202 aa11.35□□□□□ -0.59
RTN4IP1-204ENST00000539449 CTSWP56202 376 aa11.35□□□□□ -0.59
RTN4IP1-204ENST00000539449 RHPN1Q8TCX5 695 aa11.35□□□□□ -0.59
RTN4IP1-204ENST00000539449 SETDB2Q96T68 719 aa11.35□□□□□ -0.59
RTN4IP1-204ENST00000539449 PUS3Q9BZE2 481 aaKnown RBP11.35□□□□□ -0.59
RTN4IP1-204ENST00000539449 GREM2Q9H772 168 aa11.35□□□□□ -0.59
RTN4IP1-204ENST00000539449 COPRSQ9NQ92 184 aa11.35□□□□□ -0.59
RTN4IP1-204ENST00000539449 ABCC12Q96J65 1359 aa11.35□□□□□ -0.59
RTN4IP1-204ENST00000539449 RAB11FIP3O75154 756 aa11.34□□□□□ -0.59
RTN4IP1-204ENST00000539449 POTEIP0CG38 1075 aa11.34□□□□□ -0.59
RTN4IP1-204ENST00000539449 POTEJP0CG39 1038 aa11.34□□□□□ -0.59
RTN4IP1-204ENST00000539449 CHRNA5P30532 468 aa11.34□□□□□ -0.59
RTN4IP1-204ENST00000539449 DDR1Q08345 913 aa11.34□□□□□ -0.59
RTN4IP1-204ENST00000539449 ATG9AQ7Z3C6 839 aa11.34□□□□□ -0.59
RTN4IP1-204ENST00000539449 PLEKHM2Q8IWE5 1019 aa11.34□□□□□ -0.59
RTN4IP1-204ENST00000539449 LRRCC1Q9C099 1032 aa11.34□□□□□ -0.59
RTN4IP1-204ENST00000539449 PASKQ96RG2 1323 aa11.34□□□□□ -0.59
RTN4IP1-204ENST00000539449 SALL3Q9BXA9 1300 aa11.34□□□□□ -0.59
RTN4IP1-204ENST00000539449 MAP2K1Q02750 393 aaPredicted RBP11.33□□□□□ -0.6
RTN4IP1-204ENST00000539449 G3BP1Q13283 466 aaKnown RBP eCLIP11.33□□□□□ -0.6
RTN4IP1-204ENST00000539449 LRRC24Q50LG9 513 aa11.33□□□□□ -0.6
RTN4IP1-204ENST00000539449 SLC10A5Q5PT55 438 aa11.33□□□□□ -0.6
RTN4IP1-204ENST00000539449 SEC31BQ9NQW1 1179 aa11.33□□□□□ -0.6
RTN4IP1-204ENST00000539449 TMEM88BA6NKF7 163 aa11.32□□□□□ -0.6
RTN4IP1-204ENST00000539449 OS9Q13438 667 aaPredicted RBP11.32□□□□□ -0.6
RTN4IP1-204ENST00000539449 DPY19L2Q6NUT2 758 aa11.32□□□□□ -0.6
RTN4IP1-204ENST00000539449 NBPF5PQ86XG9 351 aaPredicted RBP11.32□□□□□ -0.6
RTN4IP1-204ENST00000539449 KIF1BPQ96EK5 621 aa11.32□□□□□ -0.6
RTN4IP1-204ENST00000539449 ANKRD31Q8N7Z5 1873 aa11.32□□□□□ -0.6
RTN4IP1-204ENST00000539449 DICER1Q9UPY3 1922 aaKnown RBP11.31□□□□□ -0.6
RTN4IP1-204ENST00000539449 SERPINB2P05120 415 aa11.31□□□□□ -0.6
RTN4IP1-204ENST00000539449 ITGA6P23229 1130 aa11.31□□□□□ -0.6
RTN4IP1-204ENST00000539449 TFCP2Q12800 502 aa11.31□□□□□ -0.6
RTN4IP1-204ENST00000539449 CCDC57Q2TAC2 916 aa11.31□□□□□ -0.6
RTN4IP1-204ENST00000539449 HSP90AB4PQ58FF6 505 aa11.31□□□□□ -0.6
RTN4IP1-204ENST00000539449 TSHZ3Q63HK5 1081 aa11.31□□□□□ -0.6
RTN4IP1-204ENST00000539449 PRR5LQ6MZQ0 368 aa11.31□□□□□ -0.6
RTN4IP1-204ENST00000539449 EAF2Q96CJ1 260 aaPredicted RBP11.31□□□□□ -0.6
RTN4IP1-204ENST00000539449 NRXN2Q9P2S2 1712 aa11.31□□□□□ -0.6
RTN4IP1-204ENST00000539449 CARMIL3Q8ND23 1372 aa11.3□□□□□ -0.6
RTN4IP1-204ENST00000539449 EYA2O00167 538 aa11.3□□□□□ -0.6
RTN4IP1-204ENST00000539449 POLRMTO00411 1230 aaKnown RBP11.3□□□□□ -0.6
RTN4IP1-204ENST00000539449 IFIT5Q13325 482 aaKnown RBP11.3□□□□□ -0.6
RTN4IP1-204ENST00000539449 TPTE2Q6XPS3 522 aa11.3□□□□□ -0.6
RTN4IP1-204ENST00000539449 NYXQ9GZU5 481 aa11.3□□□□□ -0.6
RTN4IP1-204ENST00000539449 CCDC8Q9H0W5 538 aaPredicted RBP11.3□□□□□ -0.6
RTN4IP1-204ENST00000539449 TSHZ2Q9NRE2 1034 aa11.3□□□□□ -0.6
RTN4IP1-204ENST00000539449 A0A1B0GUL6 1792 aa11.3□□□□□ -0.6
RTN4IP1-204ENST00000539449 ANKRD18BA2A2Z9 1011 aa11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 GSPT1P15170 499 aaKnown RBP11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 GTF2E1P29083 439 aaPredicted RBP11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 PDE1AP54750 535 aa11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 SF3B3Q15393 1217 aaKnown RBP11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 DEFB115Q30KQ5 88 aa11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 ERC1Q8IUD2 1116 aa11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 MCOLN1Q9GZU1 580 aa11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 TLR7Q9NYK1 1049 aaKnown RBP11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 RIPOR2Q9Y4F9 1068 aa11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 WDR33Q9C0J8 1336 aaKnown RBP11.29□□□□□ -0.6
RTN4IP1-204ENST00000539449 DLEC1Q9Y238 1755 aa11.28□□□□□ -0.6
RTN4IP1-204ENST00000539449 RIC1Q4ADV7 1423 aa11.28□□□□□ -0.6
RTN4IP1-204ENST00000539449 NFKBIEO00221 500 aa11.28□□□□□ -0.6
RTN4IP1-204ENST00000539449 CIAO1O76071 339 aa11.28□□□□□ -0.6
RTN4IP1-204ENST00000539449 C8orf34Q49A92 452 aa11.28□□□□□ -0.6
RTN4IP1-204ENST00000539449 TTC22Q5TAA0 569 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms