RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PCNTO95613 3336 aa28.38■■■□□ 2.13
SCARB1-206ENST00000539320 RTL9Q8NET4 1388 aa28.37■■■□□ 2.13
SCARB1-206ENST00000539320 HSPA1AP0DMV8 641 aaKnown RBP28.37■■■□□ 2.13
SCARB1-206ENST00000539320 HSPA1BP0DMV9 641 aaKnown RBP28.37■■■□□ 2.13
SCARB1-206ENST00000539320 UBE3BQ7Z3V4 1068 aa28.37■■■□□ 2.13
SCARB1-206ENST00000539320 PSMD14O00487 310 aa28.36■■■□□ 2.13
SCARB1-206ENST00000539320 IFFO2Q5TF58 517 aa28.36■■■□□ 2.13
SCARB1-206ENST00000539320 TTLL11Q8NHH1 800 aa28.36■■■□□ 2.13
SCARB1-206ENST00000539320 XDHP47989 1333 aa28.36■■■□□ 2.13
SCARB1-206ENST00000539320 H7C1W4 665 aa28.35■■■□□ 2.13
SCARB1-206ENST00000539320 GCKRQ14397 625 aa28.35■■■□□ 2.13
SCARB1-206ENST00000539320 DOK7Q18PE1 504 aa28.35■■■□□ 2.13
SCARB1-206ENST00000539320 ZC3H12CQ9C0D7 883 aaKnown RBP28.35■■■□□ 2.13
SCARB1-206ENST00000539320 GREM2Q9H772 168 aa28.35■■■□□ 2.13
SCARB1-206ENST00000539320 LINS1Q8NG48 757 aa28.34■■■□□ 2.13
SCARB1-206ENST00000539320 TRPM4Q8TD43 1214 aa28.34■■■□□ 2.13
SCARB1-206ENST00000539320 CNOT7Q9UIV1 285 aaKnown RBP28.34■■■□□ 2.13
SCARB1-206ENST00000539320 MICALL2Q8IY33 904 aa28.33■■■□□ 2.13
SCARB1-206ENST00000539320 PLA2G12BQ9BX93 195 aa28.33■■■□□ 2.13
SCARB1-206ENST00000539320 ZBTB12Q9Y330 459 aaPredicted RBP28.33■■■□□ 2.13
SCARB1-206ENST00000539320 SPEF2Q9C093 1822 aa28.32■■■□□ 2.12
SCARB1-206ENST00000539320 TRPM7Q96QT4 1865 aa28.32■■■□□ 2.12
SCARB1-206ENST00000539320 SCN9AQ15858 1988 aa28.32■■■□□ 2.12
SCARB1-206ENST00000539320 SHTN1A0MZ66 631 aa28.32■■■□□ 2.12
SCARB1-206ENST00000539320 H7C1D1 291 aa28.32■■■□□ 2.12
SCARB1-206ENST00000539320 DPF2Q92785 391 aa28.32■■■□□ 2.12
SCARB1-206ENST00000539320 RASSF10A6NK89 507 aa28.31■■■□□ 2.12
SCARB1-206ENST00000539320 TRAF5O00463 557 aa28.31■■■□□ 2.12
SCARB1-206ENST00000539320 RPS12P25398 132 aaKnown RBP28.31■■■□□ 2.12
SCARB1-206ENST00000539320 FMR1Q06787 632 aaKnown RBP eCLIP28.31■■■□□ 2.12
SCARB1-206ENST00000539320 ABT1Q9ULW3 272 aaKnown RBP28.31■■■□□ 2.12
SCARB1-206ENST00000539320 ZNF521Q96K83 1311 aa28.3■■■□□ 2.12
SCARB1-206ENST00000539320 G3V3G9 751 aa28.3■■■□□ 2.12
SCARB1-206ENST00000539320 ATP2B4P23634 1241 aa28.3■■■□□ 2.12
SCARB1-206ENST00000539320 VEGFBP49765 207 aa28.3■■■□□ 2.12
SCARB1-206ENST00000539320 CASP7P55210 303 aa28.3■■■□□ 2.12
SCARB1-206ENST00000539320 DCAF8Q5TAQ9 597 aa28.3■■■□□ 2.12
SCARB1-206ENST00000539320 ZC3H15Q8WU90 426 aaKnown RBP28.3■■■□□ 2.12
SCARB1-206ENST00000539320 BSDC1Q9NW68 430 aaPredicted RBP28.3■■■□□ 2.12
SCARB1-206ENST00000539320 HIRAP54198 1017 aaPredicted RBP28.29■■■□□ 2.12
SCARB1-206ENST00000539320 KCNQ5Q9NR82 932 aa28.29■■■□□ 2.12
SCARB1-206ENST00000539320 PGAP2Q9UHJ9 254 aa28.29■■■□□ 2.12
SCARB1-206ENST00000539320 F6X3S4 739 aa28.28■■■□□ 2.12
SCARB1-206ENST00000539320 FAM161AQ3B820 660 aa28.28■■■□□ 2.12
SCARB1-206ENST00000539320 DEFB115Q30KQ5 88 aa28.27■■■□□ 2.12
SCARB1-206ENST00000539320 GLIS2Q9BZE0 524 aaPredicted RBP28.27■■■□□ 2.12
SCARB1-206ENST00000539320 IGHMBP2P38935 993 aaKnown RBP28.26■■■□□ 2.11
SCARB1-206ENST00000539320 MINPP1Q9UNW1 487 aa28.26■■■□□ 2.11
SCARB1-206ENST00000539320 ZNF609O15014 1411 aa28.26■■■□□ 2.11
SCARB1-206ENST00000539320 MED23Q9ULK4 1368 aa28.25■■■□□ 2.11
SCARB1-206ENST00000539320 PSME4Q14997 1843 aa28.25■■■□□ 2.11
SCARB1-206ENST00000539320 VIL1P09327 827 aaKnown RBP28.25■■■□□ 2.11
SCARB1-206ENST00000539320 ITGA6P23229 1130 aa28.25■■■□□ 2.11
SCARB1-206ENST00000539320 BEND3Q5T5X7 828 aa28.25■■■□□ 2.11
SCARB1-206ENST00000539320 TBC1D10BQ4KMP7 808 aaPredicted RBP28.24■■■□□ 2.11
SCARB1-206ENST00000539320 COL13A1Q5TAT6 717 aaPredicted RBP28.24■■■□□ 2.11
SCARB1-206ENST00000539320 SAMD7Q7Z3H4 446 aa28.24■■■□□ 2.11
SCARB1-206ENST00000539320 CSF1RP07333 972 aa28.23■■■□□ 2.11
SCARB1-206ENST00000539320 CST9Q5W186 159 aa28.23■■■□□ 2.11
SCARB1-206ENST00000539320 CELF2O95319 508 aaKnown RBP28.22■■■□□ 2.11
SCARB1-206ENST00000539320 CCT4P50991 539 aaKnown RBP28.22■■■□□ 2.11
SCARB1-206ENST00000539320 CDC37L1Q7L3B6 337 aa28.22■■■□□ 2.11
SCARB1-206ENST00000539320 EGFRP00533 1210 aa28.21■■■□□ 2.11
SCARB1-206ENST00000539320 RSBN1LQ6PCB5 846 aaPredicted RBP28.21■■■□□ 2.11
SCARB1-206ENST00000539320 MPHOSPH8Q99549 860 aa28.21■■■□□ 2.11
SCARB1-206ENST00000539320 TLL2Q9Y6L7 1015 aa28.21■■■□□ 2.11
SCARB1-206ENST00000539320 THSD7BQ9C0I4 1608 aa28.21■■■□□ 2.11
SCARB1-206ENST00000539320 WDR33Q9C0J8 1336 aaKnown RBP28.2■■■□□ 2.11
SCARB1-206ENST00000539320 KIF4BQ2VIQ3 1234 aa28.2■■■□□ 2.1
SCARB1-206ENST00000539320 PAXIP1Q6ZW49 1069 aaPredicted RBP28.2■■■□□ 2.1
SCARB1-206ENST00000539320 PODNQ7Z5L7 613 aa28.2■■■□□ 2.1
SCARB1-206ENST00000539320 WTIPA6NIX2 430 aaPredicted RBP28.19■■■□□ 2.1
SCARB1-206ENST00000539320 AGBL3Q8NEM8 1001 aa28.19■■■□□ 2.1
SCARB1-206ENST00000539320 AIDAQ96BJ3 306 aa28.19■■■□□ 2.1
SCARB1-206ENST00000539320 LEMD3Q9Y2U8 911 aa28.19■■■□□ 2.1
SCARB1-206ENST00000539320 ANKRD18BA2A2Z9 1011 aa28.18■■■□□ 2.1
SCARB1-206ENST00000539320 ECE1P42892 770 aa28.18■■■□□ 2.1
SCARB1-206ENST00000539320 RBM26Q5T8P6 1007 aaKnown RBP28.18■■■□□ 2.1
SCARB1-206ENST00000539320 CAPNS2Q96L46 248 aa28.18■■■□□ 2.1
SCARB1-206ENST00000539320 ANKRD2Q9GZV1 360 aa28.18■■■□□ 2.1
SCARB1-206ENST00000539320 USP17L3A6NCW0 530 aa28.17■■■□□ 2.1
SCARB1-206ENST00000539320 USP17L4A6NCW7 530 aa28.17■■■□□ 2.1
SCARB1-206ENST00000539320 E9PSI1 815 aa28.17■■■□□ 2.1
SCARB1-206ENST00000539320 GRM8O00222 908 aa28.17■■■□□ 2.1
SCARB1-206ENST00000539320 USP17L1Q7RTZ2 530 aa28.17■■■□□ 2.1
SCARB1-206ENST00000539320 ZNF408Q9H9D4 720 aa28.17■■■□□ 2.1
SCARB1-206ENST00000539320 FOXN1O15353 648 aa28.16■■■□□ 2.1
SCARB1-206ENST00000539320 ALDH1L1O75891 902 aa28.16■■■□□ 2.1
SCARB1-206ENST00000539320 FOXO4P98177 505 aa28.16■■■□□ 2.1
SCARB1-206ENST00000539320 SLC4A10Q6U841 1118 aa28.16■■■□□ 2.1
SCARB1-206ENST00000539320 KRT26Q7Z3Y9 468 aa28.16■■■□□ 2.1
SCARB1-206ENST00000539320 USP48Q86UV5 1035 aa28.16■■■□□ 2.1
SCARB1-206ENST00000539320 CHMP3Q9Y3E7 222 aa28.16■■■□□ 2.1
SCARB1-206ENST00000539320 ZNF804BA4D1E1 1349 aa28.16■■■□□ 2.1
SCARB1-206ENST00000539320 ZNF280AP59817 542 aaPredicted RBP28.15■■■□□ 2.1
SCARB1-206ENST00000539320 IFIT5Q13325 482 aaKnown RBP28.15■■■□□ 2.1
SCARB1-206ENST00000539320 SAPCD2Q86UD0 394 aa28.15■■■□□ 2.1
SCARB1-206ENST00000539320 GMLQ99445 158 aa28.15■■■□□ 2.1
SCARB1-206ENST00000539320 SRCIN1Q9C0H9 1055 aa28.15■■■□□ 2.1
SCARB1-206ENST00000539320 WBP1LQ9NX94 342 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms