RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 SOX18P35713 384 aa11.13□□□□□ -0.63
CCDC7-209ENST00000539197 NLRP13Q86W25 1043 aa11.13□□□□□ -0.63
CCDC7-209ENST00000539197 IL22RA1Q8N6P7 574 aa11.13□□□□□ -0.63
CCDC7-209ENST00000539197 MEGF10Q96KG7 1140 aa11.13□□□□□ -0.63
CCDC7-209ENST00000539197 UBAP1LF5GYI3 381 aa11.12□□□□□ -0.63
CCDC7-209ENST00000539197 DLL1O00548 723 aa11.12□□□□□ -0.63
CCDC7-209ENST00000539197 HOXD8P13378 290 aaPredicted RBP11.12□□□□□ -0.63
CCDC7-209ENST00000539197 ZMYND15Q9H091 742 aa11.12□□□□□ -0.63
CCDC7-209ENST00000539197 FAM13BQ9NYF5 915 aa11.12□□□□□ -0.63
CCDC7-209ENST00000539197 ALX3O95076 343 aa11.11□□□□□ -0.63
CCDC7-209ENST00000539197 ZAP70P43403 619 aa11.11□□□□□ -0.63
CCDC7-209ENST00000539197 GPR152Q8TDT2 470 aa11.11□□□□□ -0.63
CCDC7-209ENST00000539197 SEPT3Q9UH03 358 aa11.11□□□□□ -0.63
CCDC7-209ENST00000539197 ARID3CA6NKF2 412 aa11.1□□□□□ -0.63
CCDC7-209ENST00000539197 PTCD1O75127 700 aaKnown RBP11.1□□□□□ -0.63
CCDC7-209ENST00000539197 SCNN1AP37088 669 aa11.1□□□□□ -0.63
CCDC7-209ENST00000539197 ARTNQ5T4W7 220 aa11.1□□□□□ -0.63
CCDC7-209ENST00000539197 ADAMTSL4Q6UY14 1074 aa11.1□□□□□ -0.63
CCDC7-209ENST00000539197 PIK3R5Q8WYR1 880 aa11.1□□□□□ -0.63
CCDC7-209ENST00000539197 CLP1Q92989 425 aaKnown RBP11.1□□□□□ -0.63
CCDC7-209ENST00000539197 ZFP64Q9NPA5 681 aa11.1□□□□□ -0.63
CCDC7-209ENST00000539197 ATP11AP98196 1134 aa11.09□□□□□ -0.63
CCDC7-209ENST00000539197 SETDB1Q15047 1291 aa11.08□□□□□ -0.64
CCDC7-209ENST00000539197 OR13H1Q8NG92 308 aa11.08□□□□□ -0.64
CCDC7-209ENST00000539197 PBXIP1Q96AQ6 731 aa11.08□□□□□ -0.64
CCDC7-209ENST00000539197 SRA1Q9HD15 236 aaKnown RBP11.08□□□□□ -0.64
CCDC7-209ENST00000539197 STIM2Q9P246 746 aa11.08□□□□□ -0.64
CCDC7-209ENST00000539197 CYP2E1P05181 493 aaPredicted RBP11.07□□□□□ -0.64
CCDC7-209ENST00000539197 ATCAYQ86WG3 371 aa11.07□□□□□ -0.64
CCDC7-209ENST00000539197 DCAF11Q8TEB1 546 aa11.07□□□□□ -0.64
CCDC7-209ENST00000539197 MAP4K3Q8IVH8 894 aa11.06□□□□□ -0.64
CCDC7-209ENST00000539197 CACTIN-AS1Q8N1I8 211 aa11.06□□□□□ -0.64
CCDC7-209ENST00000539197 MRPL18Q9H0U6 180 aaKnown RBP11.06□□□□□ -0.64
CCDC7-209ENST00000539197 AKTIPQ9H8T0 292 aa11.06□□□□□ -0.64
CCDC7-209ENST00000539197 FNDC3AQ9Y2H6 1198 aaKnown RBP11.06□□□□□ -0.64
CCDC7-209ENST00000539197 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.06□□□□□ -0.64
CCDC7-209ENST00000539197 ATP2B4P23634 1241 aa11.05□□□□□ -0.64
CCDC7-209ENST00000539197 TXNDC11Q6PKC3 985 aa11.05□□□□□ -0.64
CCDC7-209ENST00000539197 LACRTQ9GZZ8 138 aa11.05□□□□□ -0.64
CCDC7-209ENST00000539197 AGGF1Q8N302 714 aaeCLIP11.04□□□□□ -0.64
CCDC7-209ENST00000539197 MUC3BQ9H195 1237 aa11.04□□□□□ -0.64
CCDC7-209ENST00000539197 CDC25BP30305 580 aa11.03□□□□□ -0.64
CCDC7-209ENST00000539197 HYAL2Q12891 473 aa11.03□□□□□ -0.64
CCDC7-209ENST00000539197 LRP8Q14114 963 aa11.03□□□□□ -0.64
CCDC7-209ENST00000539197 TTC39BQ5VTQ0 682 aaPredicted RBP11.03□□□□□ -0.64
CCDC7-209ENST00000539197 CEP135Q66GS9 1140 aa11.03□□□□□ -0.64
CCDC7-209ENST00000539197 NBPF11Q86T75 865 aa11.03□□□□□ -0.64
CCDC7-209ENST00000539197 TMEM130Q8N3G9 435 aa11.03□□□□□ -0.64
CCDC7-209ENST00000539197 GALNT11Q8NCW6 608 aa11.03□□□□□ -0.64
CCDC7-209ENST00000539197 CCDC97Q96F63 343 aaPredicted RBP11.03□□□□□ -0.64
CCDC7-209ENST00000539197 SPACA7Q96KW9 195 aa11.03□□□□□ -0.64
CCDC7-209ENST00000539197 RASSF4Q9H2L5 321 aa11.03□□□□□ -0.64
CCDC7-209ENST00000539197 F8W735 103 aaPredicted RBP11.02□□□□□ -0.65
CCDC7-209ENST00000539197 LINC01387J3KSC0 135 aa11.02□□□□□ -0.65
CCDC7-209ENST00000539197 ABTB2Q8N961 1025 aa11.02□□□□□ -0.65
CCDC7-209ENST00000539197 KRTAP4-8Q9BYQ9 185 aa11.02□□□□□ -0.65
CCDC7-209ENST00000539197 TMEM63CQ9P1W3 806 aa11.02□□□□□ -0.65
CCDC7-209ENST00000539197 PPME1Q9Y570 386 aa11.02□□□□□ -0.65
CCDC7-209ENST00000539197 DZIP1LQ8IYY4 767 aaKnown RBP11.01□□□□□ -0.65
CCDC7-209ENST00000539197 NUDT16Q96DE0 195 aaKnown RBP11.01□□□□□ -0.65
CCDC7-209ENST00000539197 WISP1O95388 367 aa11□□□□□ -0.65
CCDC7-209ENST00000539197 PRR23CQ6ZRP0 262 aa11□□□□□ -0.65
CCDC7-209ENST00000539197 ABI2Q9NYB9 513 aaPredicted RBP11□□□□□ -0.65
CCDC7-209ENST00000539197 KCNK4Q9NYG8 393 aa11□□□□□ -0.65
CCDC7-209ENST00000539197 SMNDC1O75940 238 aaKnown RBP eCLIP10.99□□□□□ -0.65
CCDC7-209ENST00000539197 CARD10Q9BWT7 1032 aa10.99□□□□□ -0.65
CCDC7-209ENST00000539197 CNTN3Q9P232 1028 aa10.99□□□□□ -0.65
CCDC7-209ENST00000539197 KANSL3Q9P2N6 904 aa10.99□□□□□ -0.65
CCDC7-209ENST00000539197 SERPINA10Q9UK55 444 aa10.99□□□□□ -0.65
CCDC7-209ENST00000539197 A6NHS1 94 aa10.98□□□□□ -0.65
CCDC7-209ENST00000539197 TM4SF5O14894 197 aa10.98□□□□□ -0.65
CCDC7-209ENST00000539197 KIF4AO95239 1232 aa10.98□□□□□ -0.65
CCDC7-209ENST00000539197 ACPPP15309 386 aa10.98□□□□□ -0.65
CCDC7-209ENST00000539197 PSMG3-AS1Q96PY0 264 aa10.98□□□□□ -0.65
CCDC7-209ENST00000539197 HYAL3O43820 417 aaPredicted RBP10.97□□□□□ -0.65
CCDC7-209ENST00000539197 ELP3Q9H9T3 547 aa10.97□□□□□ -0.65
CCDC7-209ENST00000539197 SH2B1Q9NRF2 756 aaPredicted RBP10.97□□□□□ -0.65
CCDC7-209ENST00000539197 CEP120Q8N960 986 aa10.96□□□□□ -0.65
CCDC7-209ENST00000539197 RNF112Q9ULX5 631 aa10.96□□□□□ -0.65
CCDC7-209ENST00000539197 GLB1P16278 677 aa10.95□□□□□ -0.66
CCDC7-209ENST00000539197 EPHA1P21709 976 aa10.95□□□□□ -0.66
CCDC7-209ENST00000539197 CDC27P30260 824 aa10.95□□□□□ -0.66
CCDC7-209ENST00000539197 MTMR3Q13615 1198 aa10.95□□□□□ -0.66
CCDC7-209ENST00000539197 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.95□□□□□ -0.66
CCDC7-209ENST00000539197 NCAPG2Q86XI2 1143 aa10.95□□□□□ -0.66
CCDC7-209ENST00000539197 EDEM1Q92611 657 aa10.95□□□□□ -0.66
CCDC7-209ENST00000539197 UBL7Q96S82 380 aaPredicted RBP10.95□□□□□ -0.66
CCDC7-209ENST00000539197 PBX4Q9BYU1 374 aa10.95□□□□□ -0.66
CCDC7-209ENST00000539197 GGNBP2Q9H3C7 697 aa10.95□□□□□ -0.66
CCDC7-209ENST00000539197 DDX3YO15523 660 aaKnown RBP10.94□□□□□ -0.66
CCDC7-209ENST00000539197 TRPA1O75762 1119 aa10.94□□□□□ -0.66
CCDC7-209ENST00000539197 DNM1Q05193 864 aaKnown RBP10.94□□□□□ -0.66
CCDC7-209ENST00000539197 PDE12Q6L8Q7 609 aaKnown RBP10.94□□□□□ -0.66
CCDC7-209ENST00000539197 Q6ZS46 218 aa10.94□□□□□ -0.66
CCDC7-209ENST00000539197 ZNF438Q7Z4V0 828 aa10.94□□□□□ -0.66
CCDC7-209ENST00000539197 SLC51AQ86UW1 340 aa10.94□□□□□ -0.66
CCDC7-209ENST00000539197 C1orf127Q8N9H9 656 aa10.94□□□□□ -0.66
CCDC7-209ENST00000539197 POP1Q99575 1024 aaKnown RBP10.94□□□□□ -0.66
CCDC7-209ENST00000539197 CARNS1A5YM72 827 aa10.93□□□□□ -0.66
CCDC7-209ENST00000539197 HELQQ8TDG4 1101 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms