RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 SP8Q8IXZ3 490 aa12.6□□□□□ -0.39
CLPB-210ENST00000539148 GPATCH3Q96I76 525 aa12.6□□□□□ -0.39
CLPB-210ENST00000539148 SIL1Q9H173 461 aa12.6□□□□□ -0.39
CLPB-210ENST00000539148 ARFGEF1Q9Y6D6 1849 aa12.6□□□□□ -0.39
CLPB-210ENST00000539148 KCNJ4P48050 445 aa12.59□□□□□ -0.39
CLPB-210ENST00000539148 RFX5P48382 616 aaPredicted RBP12.59□□□□□ -0.39
CLPB-210ENST00000539148 DALRD3Q5D0E6 543 aaKnown RBP12.59□□□□□ -0.39
CLPB-210ENST00000539148 SIRT2Q8IXJ6 389 aa12.59□□□□□ -0.39
CLPB-210ENST00000539148 SMC5Q8IY18 1101 aa12.59□□□□□ -0.39
CLPB-210ENST00000539148 SUPT20HQ8NEM7 779 aa12.59□□□□□ -0.39
CLPB-210ENST00000539148 GPR108Q9NPR9 543 aa12.59□□□□□ -0.39
CLPB-210ENST00000539148 SEC31BQ9NQW1 1179 aa12.59□□□□□ -0.39
CLPB-210ENST00000539148 ANKIB1Q9P2G1 1089 aa12.59□□□□□ -0.39
CLPB-210ENST00000539148 ATP6V0A2Q9Y487 856 aa12.59□□□□□ -0.39
CLPB-210ENST00000539148 DCAF8L1A6NGE4 600 aa12.58□□□□□ -0.4
CLPB-210ENST00000539148 LRRC37AA6NMS7 1700 aa12.58□□□□□ -0.4
CLPB-210ENST00000539148 DPEP1P16444 411 aa12.58□□□□□ -0.4
CLPB-210ENST00000539148 PRPF40BQ6NWY9 871 aaKnown RBP12.58□□□□□ -0.4
CLPB-210ENST00000539148 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
CLPB-210ENST00000539148 RTKN2Q8IZC4 609 aa12.58□□□□□ -0.4
CLPB-210ENST00000539148 EXOC6BQ9Y2D4 811 aa12.58□□□□□ -0.4
CLPB-210ENST00000539148 LEMD3Q9Y2U8 911 aa12.58□□□□□ -0.4
CLPB-210ENST00000539148 XDHP47989 1333 aa12.58□□□□□ -0.4
CLPB-210ENST00000539148 A0A0G2JLW4 131 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 PDE8BO95263 885 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 IFIT1P09914 478 aaKnown RBP12.57□□□□□ -0.4
CLPB-210ENST00000539148 YY1P25490 414 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 CHRNA5P30532 468 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 UBE4AQ14139 1066 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 PUM3Q15397 648 aaKnown RBP12.57□□□□□ -0.4
CLPB-210ENST00000539148 CCDC93Q567U6 631 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 ANKRD45Q5TZF3 282 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 RHPN1Q8TCX5 695 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 CELF1Q92879 486 aaKnown RBP12.57□□□□□ -0.4
CLPB-210ENST00000539148 ZNF594Q96JF6 807 aaPredicted RBP12.57□□□□□ -0.4
CLPB-210ENST00000539148 EYA3Q99504 573 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
CLPB-210ENST00000539148 PA2G4Q9UQ80 394 aaKnown RBP12.57□□□□□ -0.4
CLPB-210ENST00000539148 RBM19Q9Y4C8 960 aaKnown RBP12.57□□□□□ -0.4
CLPB-210ENST00000539148 RIPOR2Q9Y4F9 1068 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 SLX4Q8IY92 1834 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 KIAA1551Q9HCM1 1747 aa12.57□□□□□ -0.4
CLPB-210ENST00000539148 A0A1B0GUL6 1792 aa12.56□□□□□ -0.4
CLPB-210ENST00000539148 IFIT2P09913 472 aaKnown RBP12.56□□□□□ -0.4
CLPB-210ENST00000539148 SLC5A1P13866 664 aa12.56□□□□□ -0.4
CLPB-210ENST00000539148 ATP2B4P23634 1241 aa12.56□□□□□ -0.4
CLPB-210ENST00000539148 GORABQ5T7V8 394 aa12.56□□□□□ -0.4
CLPB-210ENST00000539148 MPNDQ8N594 471 aa12.56□□□□□ -0.4
CLPB-210ENST00000539148 VPS33BQ9H267 617 aa12.56□□□□□ -0.4
CLPB-210ENST00000539148 MINPP1Q9UNW1 487 aa12.56□□□□□ -0.4
CLPB-210ENST00000539148 CHD4Q14839 1912 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 APBB1O00213 710 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 IGHDP01880 384 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 CHRNDQ07001 517 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 ATP2B3Q16720 1220 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 CAVIN4Q5BKX8 364 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 DPP8Q6V1X1 898 aaPredicted RBP12.55□□□□□ -0.4
CLPB-210ENST00000539148 ATG9AQ7Z3C6 839 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 KLHDC4Q8TBB5 520 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 LPIN2Q92539 896 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 SYT17Q9BSW7 474 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 GNL3LQ9NVN8 582 aaKnown RBP12.55□□□□□ -0.4
CLPB-210ENST00000539148 PODXL2Q9NZ53 605 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 GGA1Q9UJY5 639 aa12.55□□□□□ -0.4
CLPB-210ENST00000539148 NSFL1CQ9UNZ2 370 aaKnown RBP12.55□□□□□ -0.4
CLPB-210ENST00000539148 G3V3G9 751 aa12.54□□□□□ -0.4
CLPB-210ENST00000539148 NUCB1Q02818 461 aa12.54□□□□□ -0.4
CLPB-210ENST00000539148 LRRC24Q50LG9 513 aa12.54□□□□□ -0.4
CLPB-210ENST00000539148 CCDC158Q5M9N0 1113 aa12.54□□□□□ -0.4
CLPB-210ENST00000539148 DCAF8Q5TAQ9 597 aa12.54□□□□□ -0.4
CLPB-210ENST00000539148 CHD1LQ86WJ1 897 aa12.54□□□□□ -0.4
CLPB-210ENST00000539148 VPS37DQ86XT2 251 aa12.54□□□□□ -0.4
CLPB-210ENST00000539148 BCS1LQ9Y276 419 aa12.54□□□□□ -0.4
CLPB-210ENST00000539148 MYH13Q9UKX3 1938 aa12.54□□□□□ -0.4
CLPB-210ENST00000539148 ARAP2Q8WZ64 1704 aa12.54□□□□□ -0.4
CLPB-210ENST00000539148 C6orf229H3BNL8 230 aa12.53□□□□□ -0.4
CLPB-210ENST00000539148 ERC2O15083 957 aa12.53□□□□□ -0.4
CLPB-210ENST00000539148 KCNA3P22001 575 aa12.53□□□□□ -0.4
CLPB-210ENST00000539148 TFCP2Q12800 502 aa12.53□□□□□ -0.4
CLPB-210ENST00000539148 TNNI3KQ59H18 835 aa12.53□□□□□ -0.4
CLPB-210ENST00000539148 NEUROD6Q96NK8 337 aa12.53□□□□□ -0.4
CLPB-210ENST00000539148 PUS3Q9BZE2 481 aaKnown RBP12.53□□□□□ -0.4
CLPB-210ENST00000539148 ZC3H12CQ9C0D7 883 aaKnown RBP12.53□□□□□ -0.4
CLPB-210ENST00000539148 FPGT-TNNI3KV9GXZ4 949 aa12.53□□□□□ -0.4
CLPB-210ENST00000539148 ZNF804BA4D1E1 1349 aa12.53□□□□□ -0.4
CLPB-210ENST00000539148 KDM2BQ8NHM5 1336 aa12.53□□□□□ -0.4
CLPB-210ENST00000539148 C21orf2O43822 256 aa12.52□□□□□ -0.41
CLPB-210ENST00000539148 SASH1O94885 1247 aa12.52□□□□□ -0.41
CLPB-210ENST00000539148 ZNF804AQ7Z570 1209 aa12.52□□□□□ -0.41
CLPB-210ENST00000539148 AACSQ86V21 672 aa12.52□□□□□ -0.41
CLPB-210ENST00000539148 PSMD1Q99460 953 aa12.52□□□□□ -0.41
CLPB-210ENST00000539148 FER1L6Q2WGJ9 1857 aa12.52□□□□□ -0.41
CLPB-210ENST00000539148 A0A1B0GUL7 405 aa12.51□□□□□ -0.41
CLPB-210ENST00000539148 GRIN3BO60391 1043 aa12.51□□□□□ -0.41
CLPB-210ENST00000539148 UFL1O94874 794 aa12.51□□□□□ -0.41
CLPB-210ENST00000539148 UQCRFS1P1P0C7P4 283 aa12.51□□□□□ -0.41
CLPB-210ENST00000539148 C15orf52Q6ZUT6 534 aaKnown RBP12.51□□□□□ -0.41
CLPB-210ENST00000539148 IL1RAPL2Q9NP60 686 aa12.51□□□□□ -0.41
CLPB-210ENST00000539148 TTC41PQ6P2S7 1318 aa12.51□□□□□ -0.41
CLPB-210ENST00000539148 SEMA3EO15041 775 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms