RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 SLC34A2O95436 690 aa17.44■□□□□ 0.38
CD4-208ENST00000538827 IGHMBP2P38935 993 aaKnown RBP17.44■□□□□ 0.38
CD4-208ENST00000538827 FSTL1Q12841 308 aa17.44■□□□□ 0.38
CD4-208ENST00000538827 SF3B3Q15393 1217 aaKnown RBP17.44■□□□□ 0.38
CD4-208ENST00000538827 CDC5LQ99459 802 aaKnown RBP17.44■□□□□ 0.38
CD4-208ENST00000538827 CNNM1Q9NRU3 951 aa17.44■□□□□ 0.38
CD4-208ENST00000538827 WDR90Q96KV7 1748 aa17.44■□□□□ 0.38
CD4-208ENST00000538827 PDE4AP27815 886 aa17.43■□□□□ 0.38
CD4-208ENST00000538827 LRRC24Q50LG9 513 aa17.43■□□□□ 0.38
CD4-208ENST00000538827 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
CD4-208ENST00000538827 PUS3Q9BZE2 481 aaKnown RBP17.43■□□□□ 0.38
CD4-208ENST00000538827 LDHAL6AQ6ZMR3 332 aa17.42■□□□□ 0.38
CD4-208ENST00000538827 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
CD4-208ENST00000538827 ANKRD18AQ8IVF6 992 aa17.42■□□□□ 0.38
CD4-208ENST00000538827 C16orf71Q8IYS4 520 aaPredicted RBP17.42■□□□□ 0.38
CD4-208ENST00000538827 MPHOSPH8Q99549 860 aa17.42■□□□□ 0.38
CD4-208ENST00000538827 CIAO1O76071 339 aa17.41■□□□□ 0.38
CD4-208ENST00000538827 SASH1O94885 1247 aa17.41■□□□□ 0.38
CD4-208ENST00000538827 IL15P40933 162 aaPredicted RBP17.41■□□□□ 0.38
CD4-208ENST00000538827 TFCP2Q12800 502 aa17.41■□□□□ 0.38
CD4-208ENST00000538827 ZNF609O15014 1411 aa17.4■□□□□ 0.38
CD4-208ENST00000538827 METTL24Q5JXM2 366 aa17.4■□□□□ 0.38
CD4-208ENST00000538827 ATG9AQ7Z3C6 839 aa17.4■□□□□ 0.38
CD4-208ENST00000538827 CLASRPQ8N2M8 674 aaKnown RBP17.4■□□□□ 0.38
CD4-208ENST00000538827 C10orf71Q711Q0 1435 aa17.39■□□□□ 0.38
CD4-208ENST00000538827 ARAP2Q8WZ64 1704 aa17.39■□□□□ 0.37
CD4-208ENST00000538827 AACSQ86V21 672 aa17.39■□□□□ 0.37
CD4-208ENST00000538827 OTUD7AQ8TE49 926 aaPredicted RBP17.39■□□□□ 0.37
CD4-208ENST00000538827 CELF1Q92879 486 aaKnown RBP17.39■□□□□ 0.37
CD4-208ENST00000538827 BRIP1Q9BX63 1249 aa17.39■□□□□ 0.37
CD4-208ENST00000538827 NMRK2Q9NPI5 230 aa17.39■□□□□ 0.37
CD4-208ENST00000538827 FBXO3Q9UK99 471 aa17.39■□□□□ 0.37
CD4-208ENST00000538827 WWC3Q9ULE0 1092 aa17.39■□□□□ 0.37
CD4-208ENST00000538827 PCNTO95613 3336 aa17.39■□□□□ 0.37
CD4-208ENST00000538827 DLEC1Q9Y238 1755 aa17.38■□□□□ 0.37
CD4-208ENST00000538827 IFIT2P09913 472 aaKnown RBP17.38■□□□□ 0.37
CD4-208ENST00000538827 PDE6BP35913 854 aa17.38■□□□□ 0.37
CD4-208ENST00000538827 RBM17Q96I25 401 aaKnown RBP17.38■□□□□ 0.37
CD4-208ENST00000538827 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
CD4-208ENST00000538827 KIF13BQ9NQT8 1826 aa17.37■□□□□ 0.37
CD4-208ENST00000538827 HTRA3P83110 453 aa17.37■□□□□ 0.37
CD4-208ENST00000538827 GRAPQ13588 217 aa17.37■□□□□ 0.37
CD4-208ENST00000538827 CRY2Q49AN0 593 aa17.37■□□□□ 0.37
CD4-208ENST00000538827 TNNI3KQ59H18 835 aa17.37■□□□□ 0.37
CD4-208ENST00000538827 GRAPLQ8TC17 118 aaPredicted RBP17.37■□□□□ 0.37
CD4-208ENST00000538827 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.37■□□□□ 0.37
CD4-208ENST00000538827 FPGT-TNNI3KV9GXZ4 949 aa17.37■□□□□ 0.37
CD4-208ENST00000538827 LRRC37AA6NMS7 1700 aa17.37■□□□□ 0.37
CD4-208ENST00000538827 C2CD5Q86YS7 1000 aa17.36■□□□□ 0.37
CD4-208ENST00000538827 CCDC8Q9H0W5 538 aaPredicted RBP17.36■□□□□ 0.37
CD4-208ENST00000538827 MROH5Q6ZUA9 1318 aa17.36■□□□□ 0.37
CD4-208ENST00000538827 AK9Q5TCS8 1911 aa17.35■□□□□ 0.37
CD4-208ENST00000538827 MX1P20591 662 aa17.35■□□□□ 0.37
CD4-208ENST00000538827 TSHZ3Q63HK5 1081 aa17.35■□□□□ 0.37
CD4-208ENST00000538827 HELBQ8NG08 1087 aaPredicted RBP17.35■□□□□ 0.37
CD4-208ENST00000538827 GPATCH3Q96I76 525 aa17.35■□□□□ 0.37
CD4-208ENST00000538827 TLR7Q9NYK1 1049 aaKnown RBP17.35■□□□□ 0.37
CD4-208ENST00000538827 RIPOR2Q9Y4F9 1068 aa17.35■□□□□ 0.37
CD4-208ENST00000538827 NPR1P16066 1061 aa17.34■□□□□ 0.37
CD4-208ENST00000538827 RPS8P62241 208 aaKnown RBP17.34■□□□□ 0.37
CD4-208ENST00000538827 CHRNDQ07001 517 aa17.34■□□□□ 0.37
CD4-208ENST00000538827 ATP2B3Q16720 1220 aa17.34■□□□□ 0.37
CD4-208ENST00000538827 PLEKHM2Q8IWE5 1019 aa17.34■□□□□ 0.37
CD4-208ENST00000538827 ZNF622Q969S3 477 aaKnown RBP eCLIP17.34■□□□□ 0.37
CD4-208ENST00000538827 EAF2Q96CJ1 260 aaPredicted RBP17.34■□□□□ 0.37
CD4-208ENST00000538827 NEUROD6Q96NK8 337 aa17.34■□□□□ 0.37
CD4-208ENST00000538827 BSDC1Q9NW68 430 aaPredicted RBP17.34■□□□□ 0.37
CD4-208ENST00000538827 PCDH10Q9P2E7 1040 aa17.34■□□□□ 0.37
CD4-208ENST00000538827 H0YIN7 160 aa17.33■□□□□ 0.36
CD4-208ENST00000538827 TGFB2P61812 414 aa17.33■□□□□ 0.36
CD4-208ENST00000538827 AKAP2Q9Y2D5 859 aa17.33■□□□□ 0.36
CD4-208ENST00000538827 KIAA1551Q9HCM1 1747 aa17.33■□□□□ 0.36
CD4-208ENST00000538827 SALL3Q9BXA9 1300 aa17.32■□□□□ 0.36
CD4-208ENST00000538827 A0A1B0GUL7 405 aa17.32■□□□□ 0.36
CD4-208ENST00000538827 KLRG2A4D1S0 409 aaPredicted RBP17.32■□□□□ 0.36
CD4-208ENST00000538827 PPEF1O14829 653 aaPredicted RBP17.32■□□□□ 0.36
CD4-208ENST00000538827 TAF5LO75529 589 aa17.32■□□□□ 0.36
CD4-208ENST00000538827 SRGNP10124 158 aa17.32■□□□□ 0.36
CD4-208ENST00000538827 CHRNA5P30532 468 aa17.32■□□□□ 0.36
CD4-208ENST00000538827 PDE1AP54750 535 aa17.32■□□□□ 0.36
CD4-208ENST00000538827 MASTLQ96GX5 879 aa17.32■□□□□ 0.36
CD4-208ENST00000538827 CRAMP1Q96RY5 1269 aa17.32■□□□□ 0.36
CD4-208ENST00000538827 DBNDD2Q9BQY9 259 aa17.32■□□□□ 0.36
CD4-208ENST00000538827 GPR108Q9NPR9 543 aa17.32■□□□□ 0.36
CD4-208ENST00000538827 HSPA1AP0DMV8 641 aaKnown RBP17.31■□□□□ 0.36
CD4-208ENST00000538827 HSPA1BP0DMV9 641 aaKnown RBP17.31■□□□□ 0.36
CD4-208ENST00000538827 SLC5A1P13866 664 aa17.31■□□□□ 0.36
CD4-208ENST00000538827 HOXA10P31260 410 aaPredicted RBP17.31■□□□□ 0.36
CD4-208ENST00000538827 KCNJ4P48050 445 aa17.31■□□□□ 0.36
CD4-208ENST00000538827 PUM3Q15397 648 aaKnown RBP17.31■□□□□ 0.36
CD4-208ENST00000538827 ARHGAP27Q6ZUM4 889 aa17.31■□□□□ 0.36
CD4-208ENST00000538827 VGLL2Q8N8G2 317 aa17.31■□□□□ 0.36
CD4-208ENST00000538827 DBNLQ9UJU6 430 aaKnown RBP17.31■□□□□ 0.36
CD4-208ENST00000538827 AOX1Q06278 1338 aa17.3■□□□□ 0.36
CD4-208ENST00000538827 PDE8BO95263 885 aa17.3■□□□□ 0.36
CD4-208ENST00000538827 GORABQ5T7V8 394 aa17.3■□□□□ 0.36
CD4-208ENST00000538827 TTC22Q5TAA0 569 aa17.3■□□□□ 0.36
CD4-208ENST00000538827 SLC51AQ86UW1 340 aa17.3■□□□□ 0.36
CD4-208ENST00000538827 ECHDC1Q9NTX5 307 aa17.3■□□□□ 0.36
CD4-208ENST00000538827 MINPP1Q9UNW1 487 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms