RNA–Protein interactions for RNA: ENST00000538439.1

NPIPB3-209, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 4

Gene NPIPB3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-209ENST00000538439 SPIRE2Q8WWL2 714 aa12.69□□□□□ -0.38
NPIPB3-209ENST00000538439 TMEM134Q9H6X4 195 aa12.69□□□□□ -0.38
NPIPB3-209ENST00000538439 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
NPIPB3-209ENST00000538439 SPDYE5A6NIY4 337 aa12.68□□□□□ -0.38
NPIPB3-209ENST00000538439 PLSCR1O15162 318 aa12.68□□□□□ -0.38
NPIPB3-209ENST00000538439 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
NPIPB3-209ENST00000538439 NUTM1Q86Y26 1132 aa12.68□□□□□ -0.38
NPIPB3-209ENST00000538439 BANK1Q8NDB2 785 aa12.68□□□□□ -0.38
NPIPB3-209ENST00000538439 C1orf115Q9H7X2 142 aa12.68□□□□□ -0.38
NPIPB3-209ENST00000538439 ZBTB1Q9Y2K1 713 aa12.68□□□□□ -0.38
NPIPB3-209ENST00000538439 MAP3K2Q9Y2U5 619 aa12.68□□□□□ -0.38
NPIPB3-209ENST00000538439 CASZ1Q86V15 1759 aa12.68□□□□□ -0.38
NPIPB3-209ENST00000538439 ZNF831Q5JPB2 1677 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 CNTNAP4Q9C0A0 1308 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 DDX11L8A8MPP1 907 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 RAD21O60216 631 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 TRAK2O60296 914 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 TUSC1Q2TAM9 212 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 RC3H1Q5TC82 1133 aaKnown RBP12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 INTS5Q6P9B9 1019 aaKnown RBP12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 KIF6Q6ZMV9 814 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 LINC00116Q8NCU8 138 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 SRCIN1Q9C0H9 1055 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 PDGFDQ9GZP0 370 aaPredicted RBP12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 TJP1Q07157 1748 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 ADCY9O60503 1353 aa12.67□□□□□ -0.38
NPIPB3-209ENST00000538439 CICQ96RK0 1608 aaPredicted RBP12.66□□□□□ -0.38
NPIPB3-209ENST00000538439 PXDNLA1KZ92 1463 aa12.66□□□□□ -0.38
NPIPB3-209ENST00000538439 RFC5P40937 340 aa12.66□□□□□ -0.38
NPIPB3-209ENST00000538439 KCNQ4P56696 695 aa12.66□□□□□ -0.38
NPIPB3-209ENST00000538439 TTLL7Q6ZT98 887 aa12.66□□□□□ -0.38
NPIPB3-209ENST00000538439 LINS1Q8NG48 757 aa12.66□□□□□ -0.38
NPIPB3-209ENST00000538439 METTL22Q9BUU2 404 aaPredicted RBP12.66□□□□□ -0.38
NPIPB3-209ENST00000538439 LIMD1Q9UGP4 676 aa12.66□□□□□ -0.38
NPIPB3-209ENST00000538439 A0A087WZG4 1122 aa12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 ZBTB7BO15156 539 aaPredicted RBP12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 ALDH1L1O75891 902 aa12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 EIF5P55010 431 aaKnown RBP12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 TXNRD1Q16881 649 aa12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 TMEM259Q4ZIN3 620 aa12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 BEND3Q5T5X7 828 aa12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 DZIP3Q86Y13 1208 aaKnown RBP12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 CCDC136Q96JN2 1154 aa12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 KCNK17Q96T54 332 aa12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 ARID3AQ99856 593 aa12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 SPON1Q9HCB6 807 aa12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 GOLGB1Q14789 3259 aaKnown RBP12.65□□□□□ -0.38
NPIPB3-209ENST00000538439 MAP3K15Q6ZN16 1313 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 ATP10DQ9P241 1426 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 SPTLC1O15269 473 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 RPS6KA4O75676 772 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 GNAI3P08754 354 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 PPP2R2DQ66LE6 453 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 MYD88Q99836 296 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 ZBTB3Q9H5J0 574 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 ZBTB40Q9NUA8 1239 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 HDAC5Q9UQL6 1122 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 LY75O60449 1722 aa12.64□□□□□ -0.39
NPIPB3-209ENST00000538439 ERVV-1B6SEH8 477 aa12.63□□□□□ -0.39
NPIPB3-209ENST00000538439 C3orf80F5H4A9 247 aa12.63□□□□□ -0.39
NPIPB3-209ENST00000538439 GJA5P36382 358 aa12.63□□□□□ -0.39
NPIPB3-209ENST00000538439 HSP90AB3PQ58FF7 597 aa12.63□□□□□ -0.39
NPIPB3-209ENST00000538439 LRRC4BQ9NT99 713 aa12.63□□□□□ -0.39
NPIPB3-209ENST00000538439 PROX2Q3B8N5 592 aa12.62□□□□□ -0.39
NPIPB3-209ENST00000538439 RSBN1LQ6PCB5 846 aaPredicted RBP12.62□□□□□ -0.39
NPIPB3-209ENST00000538439 C9orf78Q9NZ63 289 aaPredicted RBP12.62□□□□□ -0.39
NPIPB3-209ENST00000538439 TBC1D2BQ9UPU7 963 aa12.62□□□□□ -0.39
NPIPB3-209ENST00000538439 COL15A1P39059 1388 aa12.61□□□□□ -0.39
NPIPB3-209ENST00000538439 UBTFL1P0CB47 393 aaPredicted RBP12.61□□□□□ -0.39
NPIPB3-209ENST00000538439 C1QTNF8P60827 252 aa12.61□□□□□ -0.39
NPIPB3-209ENST00000538439 TCIRG1Q13488 830 aa12.61□□□□□ -0.39
NPIPB3-209ENST00000538439 B4GALNT3Q6L9W6 998 aa12.61□□□□□ -0.39
NPIPB3-209ENST00000538439 RDH13Q8NBN7 331 aa12.61□□□□□ -0.39
NPIPB3-209ENST00000538439 MEIS3Q99687 375 aa12.61□□□□□ -0.39
NPIPB3-209ENST00000538439 COL5A3P25940 1745 aaPredicted RBP12.61□□□□□ -0.39
NPIPB3-209ENST00000538439 NEURL1BA8MQ27 555 aa12.6□□□□□ -0.39
NPIPB3-209ENST00000538439 ATP5J2-PTCD1G3V325 749 aa12.6□□□□□ -0.39
NPIPB3-209ENST00000538439 GNAI2P04899 355 aa12.6□□□□□ -0.39
NPIPB3-209ENST00000538439 IGKV5-2P06315 115 aa12.6□□□□□ -0.39
NPIPB3-209ENST00000538439 CWF19L2Q2TBE0 894 aaKnown RBP12.6□□□□□ -0.39
NPIPB3-209ENST00000538439 TRAPPC3LQ5T215 181 aa12.6□□□□□ -0.39
NPIPB3-209ENST00000538439 USP44Q9H0E7 712 aa12.6□□□□□ -0.39
NPIPB3-209ENST00000538439 RWDD1Q9H446 243 aaPredicted RBP12.6□□□□□ -0.39
NPIPB3-209ENST00000538439 ZNF652Q9Y2D9 606 aa12.6□□□□□ -0.39
NPIPB3-209ENST00000538439 IBTKQ9P2D0 1353 aaPredicted RBP12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 RGPD3A6NKT7 1758 aaPredicted RBP12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 RGPD4Q7Z3J3 1758 aa12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 SMAPO00193 183 aa12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 GRM8O00222 908 aa12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 ZPR1O75312 459 aa12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 TRIM28Q13263 835 aaKnown RBP12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 GCKRQ14397 625 aa12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 CCDC191Q8NCU4 936 aa12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 CWC25Q9NXE8 425 aaPredicted RBP12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 PCDHB15Q9Y5E8 787 aa12.59□□□□□ -0.39
NPIPB3-209ENST00000538439 MOXD2PA6NHM9 499 aa12.58□□□□□ -0.4
NPIPB3-209ENST00000538439 CAMTA2O94983 1202 aa12.58□□□□□ -0.4
NPIPB3-209ENST00000538439 C4BP0C0L5 1744 aa12.58□□□□□ -0.4
NPIPB3-209ENST00000538439 RFC4P35249 363 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms