RNA–Protein interactions for RNA: ENST00000538239.5

LRP6-203, Transcript of LDL receptor related protein 6, humanhuman

TSL 1 (best)

Gene LRP6, Length 7,812 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-203ENST00000538239 ACBD3Q9H3P7 528 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 POLR3AO14802 1390 aaPredicted RBP6.19□□□□□ -1.42
LRP6-203ENST00000538239 NEFHP12036 1026 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 IL13P35225 146 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 ARHGAP45Q92619 1136 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 TESK2Q96S53 571 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 HMG20BQ9P0W2 317 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 PDE8AO60658 829 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 HIBADHP31937 336 aaKnown RBP6.19□□□□□ -1.42
LRP6-203ENST00000538239 FKBP15Q5T1M5 1219 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 G2E3Q7L622 706 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 TXLNBQ8N3L3 684 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 NECAB1Q8N987 351 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 RNF113AO15541 343 aaKnown RBP6.19□□□□□ -1.42
LRP6-203ENST00000538239 SDSP20132 328 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 ZYXQ15942 572 aaKnown RBP6.19□□□□□ -1.42
LRP6-203ENST00000538239 PPP4R3BQ5MIZ7 849 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 CACNA2D4Q7Z3S7 1137 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 TTC16Q8NEE8 873 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 TFIP11Q9UBB9 837 aaKnown RBP6.19□□□□□ -1.42
LRP6-203ENST00000538239 TRPC5Q9UL62 973 aaPredicted RBP6.19□□□□□ -1.42
LRP6-203ENST00000538239 DENND2AQ9ULE3 1009 aa6.19□□□□□ -1.42
LRP6-203ENST00000538239 SP4Q02446 784 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 NUCB1Q02818 461 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 ARHGAP27Q6ZUM4 889 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 TEX11Q8IYF3 940 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 BRF1Q92994 677 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 DDX21Q9NR30 783 aaKnown RBP eCLIP6.18□□□□□ -1.42
LRP6-203ENST00000538239 ZBTB21Q9ULJ3 1066 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 RBM8AQ9Y5S9 174 aaKnown RBP6.18□□□□□ -1.42
LRP6-203ENST00000538239 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.18□□□□□ -1.42
LRP6-203ENST00000538239 Q6ZUG5 572 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 PUS7Q96PZ0 661 aaKnown RBP6.18□□□□□ -1.42
LRP6-203ENST00000538239 SH3TC1Q8TE82 1336 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 VAMP4O75379 141 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 ERLIN2O94905 339 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 TCERG1LQ5VWI1 586 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 ISM2Q6H9L7 571 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 FSIP1Q8NA03 581 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 FERMT2Q96AC1 680 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 ZKSCAN3Q9BRR0 538 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 METTL22Q9BUU2 404 aaPredicted RBP6.18□□□□□ -1.42
LRP6-203ENST00000538239 ZNF772Q68DY9 489 aaPredicted RBP6.18□□□□□ -1.42
LRP6-203ENST00000538239 NIM1KQ8IY84 436 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 PLCD3Q8N3E9 789 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 TMOD4Q9NZQ9 345 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 PUF60Q9UHX1 559 aaKnown RBP6.18□□□□□ -1.42
LRP6-203ENST00000538239 PIK3C2GO75747 1445 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 EFCAB6Q5THR3 1501 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 SYCE3A1L190 88 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 USP8P40818 1118 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 PDE1AP54750 535 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 SETQ01105 290 aaPredicted RBP6.18□□□□□ -1.42
LRP6-203ENST00000538239 FILIP1Q7Z7B0 1213 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 FAM43AQ8N2R8 423 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 ANKRD44Q8N8A2 993 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 RRP36Q96EU6 259 aaKnown RBP6.18□□□□□ -1.42
LRP6-203ENST00000538239 ANKRD62A6NC57 917 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 GNAT2P19087 354 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 HSP90B2PQ58FF3 399 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 KDM5DQ9BY66 1539 aa6.18□□□□□ -1.42
LRP6-203ENST00000538239 EPB41L2O43491 1005 aaKnown RBP6.17□□□□□ -1.42
LRP6-203ENST00000538239 AMPD3Q01432 767 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 TCP10Q12799 353 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 TEX35Q5T0J7 233 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 KLHDC4Q8TBB5 520 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 ALG1Q9BT22 464 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.17□□□□□ -1.42
LRP6-203ENST00000538239 PPIP5K2O43314 1243 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 TBCAO75347 108 aaKnown RBP6.17□□□□□ -1.42
LRP6-203ENST00000538239 MBD4O95243 580 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 PRKCSHP14314 528 aaPredicted RBP6.17□□□□□ -1.42
LRP6-203ENST00000538239 ZNF335Q9H4Z2 1342 aaPredicted RBP6.17□□□□□ -1.42
LRP6-203ENST00000538239 BIN1O00499 593 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 PRC1O43663 620 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 UBA7P41226 1012 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 PUM3Q15397 648 aaKnown RBP6.17□□□□□ -1.42
LRP6-203ENST00000538239 FGFR1OPO95684 399 aaKnown RBP6.17□□□□□ -1.42
LRP6-203ENST00000538239 TNNT1P13805 278 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 RXRAP19793 462 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 CCDC40Q4G0X9 1142 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 CEP85Q6P2H3 762 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 ZNF771Q7L3S4 317 aaPredicted RBP6.17□□□□□ -1.42
LRP6-203ENST00000538239 SUPT20HQ8NEM7 779 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 BEGAINQ9BUH8 593 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 PKD2L1Q9P0L9 805 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 SPDYE3A6NKU9 549 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 PDIA4P13667 645 aaKnown RBP6.17□□□□□ -1.42
LRP6-203ENST00000538239 SEPT7Q16181 437 aaKnown RBP6.17□□□□□ -1.42
LRP6-203ENST00000538239 JAKMIP3Q5VZ66 844 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 GDPD2Q9HCC8 539 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 GPCPD1Q9NPB8 672 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 TTC37Q6PGP7 1564 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 TIMM10P62072 90 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 C2CD5Q86YS7 1000 aa6.17□□□□□ -1.42
LRP6-203ENST00000538239 PARD3Q8TEW0 1356 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 ARHGEF12Q9NZN5 1544 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 KDM5AP29375 1690 aaKnown RBP6.16□□□□□ -1.42
LRP6-203ENST00000538239 ALDH1B1P30837 517 aa6.16□□□□□ -1.42
LRP6-203ENST00000538239 PDE6BP35913 854 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms