RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 UBE2Q1Q7Z7E8 422 aa13.02□□□□□ -0.33
CPSF7-217ENST00000537162 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
CPSF7-217ENST00000537162 NYXQ9GZU5 481 aa13.02□□□□□ -0.33
CPSF7-217ENST00000537162 HMOX1P09601 288 aa13.01□□□□□ -0.33
CPSF7-217ENST00000537162 GPTP24298 496 aa13.01□□□□□ -0.33
CPSF7-217ENST00000537162 RPS12P25398 132 aaKnown RBP13.01□□□□□ -0.33
CPSF7-217ENST00000537162 GPR153Q6NV75 609 aa13.01□□□□□ -0.33
CPSF7-217ENST00000537162 SP8Q8IXZ3 490 aa13.01□□□□□ -0.33
CPSF7-217ENST00000537162 RGL2O15211 777 aa13□□□□□ -0.33
CPSF7-217ENST00000537162 HOXD11P31277 338 aaPredicted RBP13□□□□□ -0.33
CPSF7-217ENST00000537162 PRKG1Q13976 671 aa13□□□□□ -0.33
CPSF7-217ENST00000537162 NBPF11Q86T75 865 aa13□□□□□ -0.33
CPSF7-217ENST00000537162 TMX4Q9H1E5 349 aaPredicted RBP13□□□□□ -0.33
CPSF7-217ENST00000537162 ZBTB4Q9P1Z0 1013 aaPredicted RBP13□□□□□ -0.33
CPSF7-217ENST00000537162 FZD1Q9UP38 647 aa13□□□□□ -0.33
CPSF7-217ENST00000537162 ZNF646O15015 1829 aaPredicted RBP12.99□□□□□ -0.33
CPSF7-217ENST00000537162 LRRC37AA6NMS7 1700 aa12.99□□□□□ -0.33
CPSF7-217ENST00000537162 DDX60Q8IY21 1712 aaKnown RBP12.99□□□□□ -0.33
CPSF7-217ENST00000537162 PRUNE2Q8WUY3 3088 aa12.99□□□□□ -0.33
CPSF7-217ENST00000537162 RIMBP2O15034 1052 aa12.99□□□□□ -0.33
CPSF7-217ENST00000537162 SLC24A1O60721 1099 aa12.99□□□□□ -0.33
CPSF7-217ENST00000537162 NTSR2O95665 410 aa12.99□□□□□ -0.33
CPSF7-217ENST00000537162 SP3Q02447 781 aa12.99□□□□□ -0.33
CPSF7-217ENST00000537162 MTFR1Q15390 333 aa12.99□□□□□ -0.33
CPSF7-217ENST00000537162 DOK7Q18PE1 504 aa12.99□□□□□ -0.33
CPSF7-217ENST00000537162 FAM122AQ96E09 287 aa12.99□□□□□ -0.33
CPSF7-217ENST00000537162 ALPK3Q96L96 1907 aa12.98□□□□□ -0.33
CPSF7-217ENST00000537162 ECE2O60344 883 aa12.98□□□□□ -0.33
CPSF7-217ENST00000537162 TEFQ10587 303 aa12.98□□□□□ -0.33
CPSF7-217ENST00000537162 NR2E3Q9Y5X4 410 aa12.98□□□□□ -0.33
CPSF7-217ENST00000537162 MUC3AQ02505 3323 aa12.98□□□□□ -0.33
CPSF7-217ENST00000537162 BCAMP50895 628 aa12.97□□□□□ -0.33
CPSF7-217ENST00000537162 ZNF280AP59817 542 aaPredicted RBP12.97□□□□□ -0.33
CPSF7-217ENST00000537162 TCIRG1Q13488 830 aa12.97□□□□□ -0.33
CPSF7-217ENST00000537162 ANKRD36CQ5JPF3 1778 aa12.97□□□□□ -0.33
CPSF7-217ENST00000537162 IBTKQ9P2D0 1353 aaPredicted RBP12.96□□□□□ -0.33
CPSF7-217ENST00000537162 COL4A1P02462 1669 aa12.96□□□□□ -0.33
CPSF7-217ENST00000537162 RPTORQ8N122 1335 aa12.96□□□□□ -0.33
CPSF7-217ENST00000537162 MANSC4A6NHS7 340 aaPredicted RBP12.96□□□□□ -0.33
CPSF7-217ENST00000537162 VIL1P09327 827 aaKnown RBP12.96□□□□□ -0.33
CPSF7-217ENST00000537162 WASHC4Q2M389 1173 aa12.96□□□□□ -0.33
CPSF7-217ENST00000537162 LDLRAD1Q5T700 205 aa12.96□□□□□ -0.33
CPSF7-217ENST00000537162 NGEFQ8N5V2 710 aa12.96□□□□□ -0.33
CPSF7-217ENST00000537162 GUCD1Q96NT3 240 aa12.96□□□□□ -0.33
CPSF7-217ENST00000537162 HTATIP2Q9BUP3 242 aa12.96□□□□□ -0.33
CPSF7-217ENST00000537162 BBOX1O75936 387 aa12.95□□□□□ -0.34
CPSF7-217ENST00000537162 NLRP3Q96P20 1036 aa12.95□□□□□ -0.34
CPSF7-217ENST00000537162 PTPN18Q99952 460 aa12.95□□□□□ -0.34
CPSF7-217ENST00000537162 GDF15Q99988 308 aa12.95□□□□□ -0.34
CPSF7-217ENST00000537162 INHBEP58166 350 aa12.94□□□□□ -0.34
CPSF7-217ENST00000537162 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
CPSF7-217ENST00000537162 TTLL7Q6ZT98 887 aa12.94□□□□□ -0.34
CPSF7-217ENST00000537162 CLMNQ96JQ2 1002 aa12.94□□□□□ -0.34
CPSF7-217ENST00000537162 ARHGAP39Q9C0H5 1083 aa12.94□□□□□ -0.34
CPSF7-217ENST00000537162 POLLQ9UGP5 575 aa12.94□□□□□ -0.34
CPSF7-217ENST00000537162 BTBD11A6QL63 1104 aa12.93□□□□□ -0.34
CPSF7-217ENST00000537162 GJA5P36382 358 aa12.93□□□□□ -0.34
CPSF7-217ENST00000537162 LRIT3Q3SXY7 679 aa12.93□□□□□ -0.34
CPSF7-217ENST00000537162 ZNF34Q8IZ26 560 aa12.93□□□□□ -0.34
CPSF7-217ENST00000537162 WNK4Q96J92 1243 aa12.93□□□□□ -0.34
CPSF7-217ENST00000537162 MYOZ2Q9NPC6 264 aa12.93□□□□□ -0.34
CPSF7-217ENST00000537162 PSME4Q14997 1843 aa12.92□□□□□ -0.34
CPSF7-217ENST00000537162 MAP3K15Q6ZN16 1313 aa12.92□□□□□ -0.34
CPSF7-217ENST00000537162 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
CPSF7-217ENST00000537162 SNRPA1P09661 255 aaKnown RBP12.92□□□□□ -0.34
CPSF7-217ENST00000537162 ANGEL1Q9UNK9 670 aaKnown RBP12.92□□□□□ -0.34
CPSF7-217ENST00000537162 LAMA2P24043 3122 aaKnown RBP12.91□□□□□ -0.34
CPSF7-217ENST00000537162 ERVV-1B6SEH8 477 aa12.91□□□□□ -0.34
CPSF7-217ENST00000537162 EVI5O60447 810 aa12.91□□□□□ -0.34
CPSF7-217ENST00000537162 BMP8BP34820 402 aa12.91□□□□□ -0.34
CPSF7-217ENST00000537162 GJA8P48165 433 aa12.91□□□□□ -0.34
CPSF7-217ENST00000537162 SLC10A5Q5PT55 438 aa12.91□□□□□ -0.34
CPSF7-217ENST00000537162 ARMC9Q7Z3E5 817 aa12.91□□□□□ -0.34
CPSF7-217ENST00000537162 SLC10A4Q96EP9 437 aa12.91□□□□□ -0.34
CPSF7-217ENST00000537162 FAM161BQ96MY7 647 aa12.91□□□□□ -0.34
CPSF7-217ENST00000537162 GMLQ99445 158 aa12.91□□□□□ -0.34
CPSF7-217ENST00000537162 ZBTB3Q9H5J0 574 aa12.91□□□□□ -0.34
CPSF7-217ENST00000537162 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
CPSF7-217ENST00000537162 C6orf229H3BNL8 230 aa12.9□□□□□ -0.34
CPSF7-217ENST00000537162 GPSM2P81274 684 aa12.9□□□□□ -0.34
CPSF7-217ENST00000537162 GRAPQ13588 217 aa12.9□□□□□ -0.34
CPSF7-217ENST00000537162 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
CPSF7-217ENST00000537162 GRAPLQ8TC17 118 aaPredicted RBP12.9□□□□□ -0.34
CPSF7-217ENST00000537162 NSFL1CQ9UNZ2 370 aaKnown RBP12.9□□□□□ -0.34
CPSF7-217ENST00000537162 CEMIPQ8WUJ3 1361 aa12.9□□□□□ -0.34
CPSF7-217ENST00000537162 SSC5DA1L4H1 1573 aa12.9□□□□□ -0.35
CPSF7-217ENST00000537162 TTC28Q96AY4 2481 aa12.89□□□□□ -0.35
CPSF7-217ENST00000537162 FARP2O94887 1054 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-217ENST00000537162 ZBTB48P10074 688 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-217ENST00000537162 HCLS1P14317 486 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-217ENST00000537162 NF2P35240 595 aa12.89□□□□□ -0.35
CPSF7-217ENST00000537162 RSBN1LQ6PCB5 846 aaPredicted RBP12.89□□□□□ -0.35
CPSF7-217ENST00000537162 TMEM265A0A087WTH1 108 aa12.88□□□□□ -0.35
CPSF7-217ENST00000537162 AGBL3Q8NEM8 1001 aa12.88□□□□□ -0.35
CPSF7-217ENST00000537162 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
CPSF7-217ENST00000537162 GJB1P08034 283 aa12.87□□□□□ -0.35
CPSF7-217ENST00000537162 USP17L8P0C7I0 530 aa12.87□□□□□ -0.35
CPSF7-217ENST00000537162 CCL5P13501 91 aa12.87□□□□□ -0.35
CPSF7-217ENST00000537162 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
CPSF7-217ENST00000537162 DDX46Q7L014 1031 aaKnown RBP12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms