RNA–Protein interactions for RNA: ENST00000536852.1

MAP3K4-208, Transcript of mitogen-activated protein kinase kinase kinase 4, human

TSL 2

Gene MAP3K4, Length 2,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MAP3K4-208	ENST00000536852		H3BQV1	296 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	TIMM10	P62072	90 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	RBM10	P98175	930 aa	Known RBP	13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	IFFO2	Q5TF58	517 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	TTLL7	Q6ZT98	887 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	ATG9A	Q7Z3C6	839 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	DDX11	Q96FC9	970 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	PAG1	Q9NWQ8	432 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	CWC25	Q9NXE8	425 aa	Predicted RBP	13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	TNS3	Q68CZ2	1445 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	TYRO3	Q06418	890 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	CKAP2L	Q8IYA6	745 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	FAM200A	Q8TCP9	573 aa		13.59	□□□□□ -0.23
MAP3K4-208	ENST00000536852	SLFNL1	Q499Z3	407 aa		13.58	□□□□□ -0.23
MAP3K4-208	ENST00000536852	STOX1	Q6ZVD7	989 aa		13.58	□□□□□ -0.23
MAP3K4-208	ENST00000536852	DDX19A	Q9NUU7	478 aa	Known RBP	13.58	□□□□□ -0.23
MAP3K4-208	ENST00000536852	MRVI1	Q9Y6F6	885 aa		13.58	□□□□□ -0.23
MAP3K4-208	ENST00000536852	PKD1L3	Q7Z443	1732 aa		13.58	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PALLD	Q8WX93	1383 aa		13.58	□□□□□ -0.24
MAP3K4-208	ENST00000536852	HMGB1	P09429	215 aa	Known RBP	13.58	□□□□□ -0.24
MAP3K4-208	ENST00000536852	SCRN1	Q12765	414 aa		13.58	□□□□□ -0.24
MAP3K4-208	ENST00000536852	REST	Q13127	1097 aa		13.58	□□□□□ -0.24
MAP3K4-208	ENST00000536852	BICD2	Q8TD16	824 aa		13.58	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PDCL3	Q9H2J4	239 aa		13.58	□□□□□ -0.24
MAP3K4-208	ENST00000536852	HELLS	Q9NRZ9	838 aa		13.58	□□□□□ -0.24
MAP3K4-208	ENST00000536852	A1BG	P04217	495 aa		13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	IL15	P40933	162 aa	Predicted RBP	13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	GLIPR1L2	Q4G1C9	344 aa		13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	DHX32	Q7L7V1	743 aa	Known RBP	13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	C17orf53	Q8N3J3	647 aa	Predicted RBP	13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	GPR108	Q9NPR9	543 aa		13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	FAM13B	Q9NYF5	915 aa		13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	SPATA31A3	Q5VYP0	1347 aa		13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	CADPS2	Q86UW7	1296 aa		13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	SPC24	Q8NBT2	197 aa		13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PGBD1	Q96JS3	809 aa		13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	ZBTB3	Q9H5J0	574 aa		13.57	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PFKFB2	O60825	505 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	GLI3	P10071	1580 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	LRRC24	Q50LG9	513 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	ZCRB1	Q8TBF4	217 aa	Known RBP	13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	ZNF594	Q96JF6	807 aa	Predicted RBP	13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	DSCC1	Q9BVC3	393 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	CLSTN2	Q9H4D0	955 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	LAMB4	A4D0S4	1761 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	DCC	P43146	1447 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	EYA2	O00167	538 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	DYNC1I1	O14576	645 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	NR1I2	O75469	434 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	ANO6	Q4KMQ2	910 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	ZMYM1	Q5SVZ6	1142 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	ILDR1	Q86SU0	546 aa	Predicted RBP	13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	LUZP1	Q86V48	1076 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	SMARCC2	Q8TAQ2	1214 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	LLPH	Q9BRT6	129 aa	Known RBP	13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	CFAP45	Q9UL16	551 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	CPD	O75976	1380 aa		13.56	□□□□□ -0.24
MAP3K4-208	ENST00000536852	GOLGA6L6	A8MZA4	724 aa		13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852	IFIT1	P09914	478 aa	Known RBP	13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852	APOBR	Q0VD83	1088 aa		13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852	CCDC191	Q8NCU4	936 aa		13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PCDH11X	Q9BZA7	1347 aa		13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PCDH11Y	Q9BZA8	1340 aa		13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852		A0A1B0GUL7	405 aa		13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852	TPM3	P06753	285 aa		13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852	RBM43	Q6ZSC3	357 aa	Known RBP	13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852	TOM1L2	Q6ZVM7	507 aa		13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852	NSUN7	Q8NE18	718 aa	Known RBP	13.55	□□□□□ -0.24
MAP3K4-208	ENST00000536852	ERVV-2	B6SEH9	535 aa		13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	HSPD1	P10809	573 aa	Known RBP	13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	FOSB	P53539	338 aa		13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	CBX8	Q9HC52	389 aa		13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	SPTLC3	Q9NUV7	552 aa		13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852		A0A0G2JLW4	131 aa		13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852		E7EWF7	191 aa		13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	RNF113A	O15541	343 aa	Known RBP	13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	CCT2	P78371	535 aa	Known RBP	13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	CEBPZ	Q03701	1054 aa	Known RBP	13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	TICAM2	Q86XR7	235 aa		13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	KCNF1	Q9H3M0	494 aa		13.54	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PTPDC1	A2A3K4	754 aa		13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	HMGN5	P82970	282 aa	Known RBP	13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	EXOSC10	Q01780	885 aa	Known RBP	13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	NAA16	Q6N069	864 aa	Predicted RBP	13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PUS3	Q9BZE2	481 aa	Known RBP	13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PRDM11	Q9NQV5	511 aa		13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	KIF3A	Q9Y496	699 aa		13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	MAST3	O60307	1309 aa		13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	CIAO1	O76071	339 aa		13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	CTDNEP1	O95476	244 aa		13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	WDR17	Q8IZU2	1322 aa		13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PARP4	Q9UKK3	1724 aa	Known RBP	13.53	□□□□□ -0.24
MAP3K4-208	ENST00000536852	MYRIP	Q8NFW9	859 aa		13.52	□□□□□ -0.24
MAP3K4-208	ENST00000536852	KIAA1524	Q8TCG1	905 aa		13.52	□□□□□ -0.24
MAP3K4-208	ENST00000536852	PRIMPOL	Q96LW4	560 aa		13.52	□□□□□ -0.24
MAP3K4-208	ENST00000536852	AGXT2	Q9BYV1	514 aa		13.52	□□□□□ -0.24
MAP3K4-208	ENST00000536852	NCOA5	Q9HCD5	579 aa	Known RBP	13.52	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms