RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 IP6K1Q92551 441 aa9.74□□□□□ -0.85
YBX3-206ENST00000536823 PSMG3-AS1Q96PY0 264 aa9.74□□□□□ -0.85
YBX3-206ENST00000536823 PGPEP1Q9NXJ5 209 aa9.74□□□□□ -0.85
YBX3-206ENST00000536823 CNTNAP5Q8WYK1 1306 aa9.74□□□□□ -0.85
YBX3-206ENST00000536823 BCL9O00512 1426 aa9.73□□□□□ -0.85
YBX3-206ENST00000536823 SBF2Q86WG5 1849 aa9.73□□□□□ -0.85
YBX3-206ENST00000536823 CARD14Q9BXL6 1004 aa9.73□□□□□ -0.85
YBX3-206ENST00000536823 GGNBP2Q9H3C7 697 aa9.73□□□□□ -0.85
YBX3-206ENST00000536823 NLRP2Q9NX02 1062 aa9.73□□□□□ -0.85
YBX3-206ENST00000536823 PARD3Q8TEW0 1356 aa9.73□□□□□ -0.85
YBX3-206ENST00000536823 MAGEB6P1A0A0J9YX57 407 aa9.72□□□□□ -0.85
YBX3-206ENST00000536823 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
YBX3-206ENST00000536823 HOXC9P31274 260 aa9.72□□□□□ -0.85
YBX3-206ENST00000536823 PPP1R26Q5T8A7 1209 aaPredicted RBP9.72□□□□□ -0.85
YBX3-206ENST00000536823 ARMC2Q8NEN0 867 aa9.72□□□□□ -0.85
YBX3-206ENST00000536823 RREB1Q92766 1687 aa9.71□□□□□ -0.85
YBX3-206ENST00000536823 RGPD3A6NKT7 1758 aaPredicted RBP9.71□□□□□ -0.85
YBX3-206ENST00000536823 RGPD4Q7Z3J3 1758 aa9.71□□□□□ -0.85
YBX3-206ENST00000536823 APBA3O96018 575 aa9.71□□□□□ -0.86
YBX3-206ENST00000536823 FBLN1P23142 703 aa9.71□□□□□ -0.86
YBX3-206ENST00000536823 GJA5P36382 358 aa9.71□□□□□ -0.86
YBX3-206ENST00000536823 CTSOP43234 321 aaPredicted RBP9.71□□□□□ -0.86
YBX3-206ENST00000536823 AMPHP49418 695 aa9.71□□□□□ -0.86
YBX3-206ENST00000536823 PODNQ7Z5L7 613 aa9.71□□□□□ -0.86
YBX3-206ENST00000536823 Q8N3U1 123 aa9.71□□□□□ -0.86
YBX3-206ENST00000536823 MARCH10Q8NA82 808 aaPredicted RBP9.71□□□□□ -0.86
YBX3-206ENST00000536823 CAMKK2Q96RR4 588 aa9.71□□□□□ -0.86
YBX3-206ENST00000536823 EXOC5O00471 708 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 PER1O15534 1290 aaPredicted RBP9.7□□□□□ -0.86
YBX3-206ENST00000536823 IL2RBP14784 551 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 PDE4DQ08499 809 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 RRS1Q15050 365 aaKnown RBP9.7□□□□□ -0.86
YBX3-206ENST00000536823 NBPF14Q5TI25 921 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 RSBN1LQ6PCB5 846 aaPredicted RBP9.7□□□□□ -0.86
YBX3-206ENST00000536823 POLR3GLQ9BT43 218 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 ZBTB3Q9H5J0 574 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 PCDHB15Q9Y5E8 787 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 CGNL1Q0VF96 1302 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 FLT4P35916 1363 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 KIF24Q5T7B8 1368 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 NUP188Q5SRE5 1749 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 ANKRD26Q9UPS8 1709 aa9.7□□□□□ -0.86
YBX3-206ENST00000536823 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.69□□□□□ -0.86
YBX3-206ENST00000536823 RGPD2P0DJD1 1756 aa9.69□□□□□ -0.86
YBX3-206ENST00000536823 GAS6Q14393 721 aa9.69□□□□□ -0.86
YBX3-206ENST00000536823 EZH2Q15910 746 aaKnown RBP9.69□□□□□ -0.86
YBX3-206ENST00000536823 AMHR2Q16671 573 aa9.69□□□□□ -0.86
YBX3-206ENST00000536823 SMG6Q86US8 1419 aaKnown RBP9.69□□□□□ -0.86
YBX3-206ENST00000536823 BEND7Q8N7W2 519 aaPredicted RBP9.69□□□□□ -0.86
YBX3-206ENST00000536823 LTV1Q96GA3 475 aaPredicted RBP9.69□□□□□ -0.86
YBX3-206ENST00000536823 INSRP06213 1382 aa9.68□□□□□ -0.86
YBX3-206ENST00000536823 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
YBX3-206ENST00000536823 SH3BP5LQ7L8J4 393 aa9.68□□□□□ -0.86
YBX3-206ENST00000536823 INSM2Q96T92 566 aaPredicted RBP9.68□□□□□ -0.86
YBX3-206ENST00000536823 KRTAP9-2Q9BYQ4 174 aa9.68□□□□□ -0.86
YBX3-206ENST00000536823 POLMQ9NP87 494 aaPredicted RBP9.68□□□□□ -0.86
YBX3-206ENST00000536823 KAT6BQ8WYB5 2073 aa9.68□□□□□ -0.86
YBX3-206ENST00000536823 NHSQ6T4R5 1651 aa9.67□□□□□ -0.86
YBX3-206ENST00000536823 MEGF6O75095 1541 aa9.67□□□□□ -0.86
YBX3-206ENST00000536823 RELBQ01201 579 aa9.67□□□□□ -0.86
YBX3-206ENST00000536823 TTLL12Q14166 644 aaPredicted RBP9.67□□□□□ -0.86
YBX3-206ENST00000536823 LRP5O75197 1615 aa9.67□□□□□ -0.86
YBX3-206ENST00000536823 NSD2O96028 1365 aa9.66□□□□□ -0.86
YBX3-206ENST00000536823 PTF1AQ7RTS3 328 aa9.66□□□□□ -0.86
YBX3-206ENST00000536823 NEDD1Q8NHV4 660 aa9.66□□□□□ -0.86
YBX3-206ENST00000536823 RNF217Q8TC41 542 aa9.66□□□□□ -0.86
YBX3-206ENST00000536823 TSC1Q92574 1164 aa9.66□□□□□ -0.86
YBX3-206ENST00000536823 AGBL1Q96MI9 1066 aa9.66□□□□□ -0.86
YBX3-206ENST00000536823 BEGAINQ9BUH8 593 aa9.66□□□□□ -0.86
YBX3-206ENST00000536823 TBC1D2Q9BYX2 928 aa9.66□□□□□ -0.86
YBX3-206ENST00000536823 NCAPD2Q15021 1401 aa9.65□□□□□ -0.86
YBX3-206ENST00000536823 SHANK3Q9BYB0 1731 aa9.65□□□□□ -0.86
YBX3-206ENST00000536823 KIF7Q2M1P5 1343 aa9.65□□□□□ -0.86
YBX3-206ENST00000536823 PLSCR1O15162 318 aa9.65□□□□□ -0.86
YBX3-206ENST00000536823 R3HDM1Q15032 1099 aaKnown RBP9.65□□□□□ -0.86
YBX3-206ENST00000536823 DIXDC1Q155Q3 683 aa9.65□□□□□ -0.86
YBX3-206ENST00000536823 HSP90AB2PQ58FF8 381 aa9.65□□□□□ -0.86
YBX3-206ENST00000536823 NBPF6Q5VWK0 638 aa9.65□□□□□ -0.86
YBX3-206ENST00000536823 NBPF4Q96M43 638 aa9.65□□□□□ -0.86
YBX3-206ENST00000536823 PANK3Q9H999 370 aa9.65□□□□□ -0.86
YBX3-206ENST00000536823 MAP2P11137 1827 aaKnown RBP9.65□□□□□ -0.86
YBX3-206ENST00000536823 ERFEQ4G0M1 354 aa9.64□□□□□ -0.87
YBX3-206ENST00000536823 USHBP1Q8N6Y0 703 aa9.64□□□□□ -0.87
YBX3-206ENST00000536823 KDM4CQ9H3R0 1056 aa9.64□□□□□ -0.87
YBX3-206ENST00000536823 GPBP1L1Q9HC44 474 aaPredicted RBP9.64□□□□□ -0.87
YBX3-206ENST00000536823 MBIPQ9NS73 344 aa9.64□□□□□ -0.87
YBX3-206ENST00000536823 BTAF1O14981 1849 aa9.63□□□□□ -0.87
YBX3-206ENST00000536823 WASHC2AQ641Q2 1341 aa9.63□□□□□ -0.87
YBX3-206ENST00000536823 KRTAP9-6A0A140TA67 174 aa9.63□□□□□ -0.87
YBX3-206ENST00000536823 KCNQ2O43526 872 aa9.63□□□□□ -0.87
YBX3-206ENST00000536823 PRPF38BQ5VTL8 546 aaKnown RBP9.63□□□□□ -0.87
YBX3-206ENST00000536823 GIGYF2Q6Y7W6 1299 aaKnown RBP9.63□□□□□ -0.87
YBX3-206ENST00000536823 RAPGEF4Q8WZA2 1011 aa9.63□□□□□ -0.87
YBX3-206ENST00000536823 POLKQ9UBT6 870 aa9.63□□□□□ -0.87
YBX3-206ENST00000536823 DOT1LQ8TEK3 1739 aa9.62□□□□□ -0.87
YBX3-206ENST00000536823 PPM1GO15355 546 aaPredicted RBP9.62□□□□□ -0.87
YBX3-206ENST00000536823 BCRP11274 1271 aa9.62□□□□□ -0.87
YBX3-206ENST00000536823 ZCRB1Q8TBF4 217 aaKnown RBP9.62□□□□□ -0.87
YBX3-206ENST00000536823 DDX54Q8TDD1 881 aaKnown RBP9.62□□□□□ -0.87
YBX3-206ENST00000536823 ACSBG1Q96GR2 724 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms