RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 COL9A3Q14050 684 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-207ENST00000536634 CCER1Q8TC90 406 aaPredicted RBP9.91□□□□□ -0.82
CLIP1-207ENST00000536634 NUDT8Q8WV74 236 aa9.91□□□□□ -0.82
CLIP1-207ENST00000536634 NSUN5Q96P11 429 aaKnown RBP9.91□□□□□ -0.82
CLIP1-207ENST00000536634 MROH2BQ7Z745 1585 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 GNB5O14775 395 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 PSAPP07602 524 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 ARHGAP4P98171 946 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 PLAURQ03405 335 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 C8orf34Q49A92 452 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 PERM1Q5SV97 790 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 PSAPL1Q6NUJ1 521 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 TRIM11Q96F44 468 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 TRAIPQ9BWF2 469 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 ELP3Q9H9T3 547 aa9.9□□□□□ -0.82
CLIP1-207ENST00000536634 GNEQ9Y223 722 aaKnown RBP9.9□□□□□ -0.82
CLIP1-207ENST00000536634 CADPSQ9ULU8 1353 aa9.89□□□□□ -0.83
CLIP1-207ENST00000536634 J3QW42 95 aa9.89□□□□□ -0.83
CLIP1-207ENST00000536634 CYP2E1P05181 493 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-207ENST00000536634 HOXD8P13378 290 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-207ENST00000536634 COL8A1P27658 744 aa9.89□□□□□ -0.83
CLIP1-207ENST00000536634 SOX18P35713 384 aa9.89□□□□□ -0.83
CLIP1-207ENST00000536634 COL13A1Q5TAT6 717 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-207ENST00000536634 PDE12Q6L8Q7 609 aaKnown RBP9.89□□□□□ -0.83
CLIP1-207ENST00000536634 ZNF438Q7Z4V0 828 aa9.89□□□□□ -0.83
CLIP1-207ENST00000536634 OR13H1Q8NG92 308 aa9.89□□□□□ -0.83
CLIP1-207ENST00000536634 PRDM6Q9NQX0 595 aa9.89□□□□□ -0.83
CLIP1-207ENST00000536634 PCSK2P16519 638 aa9.88□□□□□ -0.83
CLIP1-207ENST00000536634 PCSK7Q16549 785 aa9.88□□□□□ -0.83
CLIP1-207ENST00000536634 TTC39BQ5VTQ0 682 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-207ENST00000536634 LPIN3Q9BQK8 851 aa9.88□□□□□ -0.83
CLIP1-207ENST00000536634 JPH1Q9HDC5 661 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-207ENST00000536634 ABI2Q9NYB9 513 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-207ENST00000536634 CNTN3Q9P232 1028 aa9.88□□□□□ -0.83
CLIP1-207ENST00000536634 SOWAHDA6NJG2 315 aa9.87□□□□□ -0.83
CLIP1-207ENST00000536634 RPLP1P05386 114 aaKnown RBP9.87□□□□□ -0.83
CLIP1-207ENST00000536634 NID1P14543 1247 aa9.87□□□□□ -0.83
CLIP1-207ENST00000536634 GJD3Q8N144 294 aa9.87□□□□□ -0.83
CLIP1-207ENST00000536634 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.87□□□□□ -0.83
CLIP1-207ENST00000536634 LOC102724428A0A0B4J2F2 783 aa9.86□□□□□ -0.83
CLIP1-207ENST00000536634 LILRB5O75023 590 aa9.86□□□□□ -0.83
CLIP1-207ENST00000536634 EIF2AK2P19525 551 aaKnown RBP9.86□□□□□ -0.83
CLIP1-207ENST00000536634 SIK1P57059 783 aa9.86□□□□□ -0.83
CLIP1-207ENST00000536634 XKR5Q6UX68 686 aa9.86□□□□□ -0.83
CLIP1-207ENST00000536634 PLVAPQ9BX97 442 aa9.86□□□□□ -0.83
CLIP1-207ENST00000536634 RGS9O75916 674 aaPredicted RBP9.85□□□□□ -0.83
CLIP1-207ENST00000536634 AFF1P51825 1210 aaKnown RBP9.85□□□□□ -0.83
CLIP1-207ENST00000536634 GRIK5Q16478 980 aa9.85□□□□□ -0.83
CLIP1-207ENST00000536634 ELMSAN1Q6PJG2 1045 aa9.85□□□□□ -0.83
CLIP1-207ENST00000536634 C1orf127Q8N9H9 656 aa9.85□□□□□ -0.83
CLIP1-207ENST00000536634 SMG9Q9H0W8 520 aaKnown RBP9.85□□□□□ -0.83
CLIP1-207ENST00000536634 FRRS1LQ9P0K9 344 aa9.85□□□□□ -0.83
CLIP1-207ENST00000536634 IVNS1ABPQ9Y6Y0 642 aa9.85□□□□□ -0.83
CLIP1-207ENST00000536634 TTC16Q8NEE8 873 aa9.84□□□□□ -0.83
CLIP1-207ENST00000536634 DCAF5Q96JK2 942 aa9.84□□□□□ -0.83
CLIP1-207ENST00000536634 CHRDQ9H2X0 955 aa9.84□□□□□ -0.83
CLIP1-207ENST00000536634 KANSL3Q9P2N6 904 aa9.84□□□□□ -0.83
CLIP1-207ENST00000536634 RIMBP3CA6NJZ7 1639 aa9.84□□□□□ -0.83
CLIP1-207ENST00000536634 RIMBP3BA6NNM3 1639 aa9.84□□□□□ -0.83
CLIP1-207ENST00000536634 RIMBP3Q9UFD9 1639 aa9.84□□□□□ -0.83
CLIP1-207ENST00000536634 KCNA1Q09470 495 aa9.83□□□□□ -0.84
CLIP1-207ENST00000536634 PLD4Q96BZ4 506 aa9.83□□□□□ -0.84
CLIP1-207ENST00000536634 FOXD3Q9UJU5 478 aaPredicted RBP9.83□□□□□ -0.84
CLIP1-207ENST00000536634 BRPF3Q9ULD4 1205 aa9.83□□□□□ -0.84
CLIP1-207ENST00000536634 CEP164Q9UPV0 1460 aa9.83□□□□□ -0.84
CLIP1-207ENST00000536634 PIK3R2O00459 728 aa9.82□□□□□ -0.84
CLIP1-207ENST00000536634 TNFRSF21O75509 655 aa9.82□□□□□ -0.84
CLIP1-207ENST00000536634 USP5P45974 858 aa9.82□□□□□ -0.84
CLIP1-207ENST00000536634 HYAL2Q12891 473 aa9.82□□□□□ -0.84
CLIP1-207ENST00000536634 XP32Q5T750 250 aa9.82□□□□□ -0.84
CLIP1-207ENST00000536634 NOP53Q9NZM5 478 aaKnown RBP9.82□□□□□ -0.84
CLIP1-207ENST00000536634 FAM229AH3BQW9 127 aa9.81□□□□□ -0.84
CLIP1-207ENST00000536634 KIF4AO95239 1232 aa9.81□□□□□ -0.84
CLIP1-207ENST00000536634 GHRHP01286 108 aa9.81□□□□□ -0.84
CLIP1-207ENST00000536634 ATP11AP98196 1134 aa9.81□□□□□ -0.84
CLIP1-207ENST00000536634 FANCD2Q9BXW9 1451 aa9.8□□□□□ -0.84
CLIP1-207ENST00000536634 KRBA1A5PL33 1030 aa9.8□□□□□ -0.84
CLIP1-207ENST00000536634 CES1P23141 567 aa9.8□□□□□ -0.84
CLIP1-207ENST00000536634 EHHADHQ08426 723 aa9.8□□□□□ -0.84
CLIP1-207ENST00000536634 TTC9Q92623 222 aa9.8□□□□□ -0.84
CLIP1-207ENST00000536634 NDUFB5O43674 189 aa9.79□□□□□ -0.84
CLIP1-207ENST00000536634 IGHA1P01876 353 aa9.79□□□□□ -0.84
CLIP1-207ENST00000536634 PDIA4P13667 645 aaKnown RBP9.79□□□□□ -0.84
CLIP1-207ENST00000536634 ACPPP15309 386 aa9.79□□□□□ -0.84
CLIP1-207ENST00000536634 SNX29Q8TEQ0 813 aa9.79□□□□□ -0.84
CLIP1-207ENST00000536634 BIN2Q9UBW5 565 aaPredicted RBP9.79□□□□□ -0.84
CLIP1-207ENST00000536634 SALL4Q9UJQ4 1053 aa9.79□□□□□ -0.84
CLIP1-207ENST00000536634 TRIM33Q9UPN9 1127 aa9.79□□□□□ -0.84
CLIP1-207ENST00000536634 WIZO95785 1651 aa9.78□□□□□ -0.84
CLIP1-207ENST00000536634 EREGO14944 169 aa9.78□□□□□ -0.84
CLIP1-207ENST00000536634 ITGB2P05107 769 aa9.78□□□□□ -0.84
CLIP1-207ENST00000536634 ILDR2Q71H61 639 aa9.78□□□□□ -0.84
CLIP1-207ENST00000536634 NCAPG2Q86XI2 1143 aa9.78□□□□□ -0.84
CLIP1-207ENST00000536634 CEP120Q8N960 986 aa9.78□□□□□ -0.84
CLIP1-207ENST00000536634 FAM129BQ96TA1 746 aa9.78□□□□□ -0.84
CLIP1-207ENST00000536634 RASSF4Q9H2L5 321 aa9.78□□□□□ -0.84
CLIP1-207ENST00000536634 PHACTR2O75167 634 aa9.77□□□□□ -0.85
CLIP1-207ENST00000536634 IGHA2P01877 340 aa9.77□□□□□ -0.85
CLIP1-207ENST00000536634 TRAPPC3LQ5T215 181 aa9.77□□□□□ -0.85
CLIP1-207ENST00000536634 MSL1Q68DK7 614 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms