RNA–Protein interactions for RNA: ENST00000536548.5

CPSF7-216, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-216ENST00000536548 TMEM87AQ8NBN3 555 aa9.33□□□□□ -0.92
CPSF7-216ENST00000536548 COG3Q96JB2 828 aa9.33□□□□□ -0.92
CPSF7-216ENST00000536548 DIAPH3Q9NSV4 1193 aa9.33□□□□□ -0.92
CPSF7-216ENST00000536548 POLKQ9UBT6 870 aa9.33□□□□□ -0.92
CPSF7-216ENST00000536548 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
CPSF7-216ENST00000536548 GOLGA6L6A8MZA4 724 aa9.32□□□□□ -0.92
CPSF7-216ENST00000536548 IL13P35225 146 aa9.32□□□□□ -0.92
CPSF7-216ENST00000536548 DMTNQ08495 405 aa9.32□□□□□ -0.92
CPSF7-216ENST00000536548 C8orf58Q8NAV2 365 aa9.32□□□□□ -0.92
CPSF7-216ENST00000536548 SRCIN1Q9C0H9 1055 aa9.32□□□□□ -0.92
CPSF7-216ENST00000536548 ATP6V1DQ9Y5K8 247 aa9.32□□□□□ -0.92
CPSF7-216ENST00000536548 RTL1A6NKG5 1358 aa9.32□□□□□ -0.92
CPSF7-216ENST00000536548 CARMIL3Q8ND23 1372 aa9.32□□□□□ -0.92
CPSF7-216ENST00000536548 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
CPSF7-216ENST00000536548 AOX1Q06278 1338 aa9.31□□□□□ -0.92
CPSF7-216ENST00000536548 NRXN2Q9P2S2 1712 aa9.31□□□□□ -0.92
CPSF7-216ENST00000536548 H0YIN7 160 aa9.31□□□□□ -0.92
CPSF7-216ENST00000536548 CRKLP46109 303 aaKnown RBP9.31□□□□□ -0.92
CPSF7-216ENST00000536548 CCT4P50991 539 aaKnown RBP9.31□□□□□ -0.92
CPSF7-216ENST00000536548 NOLC1Q14978 699 aaKnown RBP eCLIP9.31□□□□□ -0.92
CPSF7-216ENST00000536548 USPL1Q5W0Q7 1092 aa9.31□□□□□ -0.92
CPSF7-216ENST00000536548 RNF214Q8ND24 703 aa9.31□□□□□ -0.92
CPSF7-216ENST00000536548 L3MBTL3Q96JM7 780 aaPredicted RBP9.31□□□□□ -0.92
CPSF7-216ENST00000536548 PHACTR3Q96KR7 559 aa9.31□□□□□ -0.92
CPSF7-216ENST00000536548 ESYT1Q9BSJ8 1104 aa9.31□□□□□ -0.92
CPSF7-216ENST00000536548 DDX21Q9NR30 783 aaKnown RBP eCLIP9.31□□□□□ -0.92
CPSF7-216ENST00000536548 SPTLC3Q9NUV7 552 aa9.31□□□□□ -0.92
CPSF7-216ENST00000536548 KIF3AQ9Y496 699 aa9.31□□□□□ -0.92
CPSF7-216ENST00000536548 CACNA1SQ13698 1873 aa9.31□□□□□ -0.92
CPSF7-216ENST00000536548 ELL2O00472 640 aaPredicted RBP9.3□□□□□ -0.92
CPSF7-216ENST00000536548 HMOX1P09601 288 aa9.3□□□□□ -0.92
CPSF7-216ENST00000536548 PHKG2P15735 406 aa9.3□□□□□ -0.92
CPSF7-216ENST00000536548 EPHX2P34913 555 aa9.3□□□□□ -0.92
CPSF7-216ENST00000536548 ECE1P42892 770 aa9.3□□□□□ -0.92
CPSF7-216ENST00000536548 PDE1AP54750 535 aa9.3□□□□□ -0.92
CPSF7-216ENST00000536548 NFIXQ14938 502 aa9.3□□□□□ -0.92
CPSF7-216ENST00000536548 ZNF622Q969S3 477 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■□□□□ 9.3
CPSF7-216ENST00000536548 THUMPD2Q9BTF0 503 aaKnown RBP9.3□□□□□ -0.92
CPSF7-216ENST00000536548 SPG7Q9UQ90 795 aa9.3□□□□□ -0.92
CPSF7-216ENST00000536548 PTCD1O75127 700 aaKnown RBP9.29□□□□□ -0.92
CPSF7-216ENST00000536548 KIF20AO95235 890 aa9.29□□□□□ -0.92
CPSF7-216ENST00000536548 SERPINB2P05120 415 aa9.29□□□□□ -0.92
CPSF7-216ENST00000536548 PDIA4P13667 645 aaKnown RBP9.29□□□□□ -0.92
CPSF7-216ENST00000536548 MX1P20591 662 aa9.29□□□□□ -0.92
CPSF7-216ENST00000536548 FKBP5Q13451 457 aaPredicted RBP9.29□□□□□ -0.92
CPSF7-216ENST00000536548 HABP4Q5JVS0 413 aaKnown RBP9.29□□□□□ -0.92
CPSF7-216ENST00000536548 CST9Q5W186 159 aa9.29□□□□□ -0.92
CPSF7-216ENST00000536548 TAOK3Q9H2K8 898 aa9.29□□□□□ -0.92
CPSF7-216ENST00000536548 HACL1Q9UJ83 578 aa9.29□□□□□ -0.92
CPSF7-216ENST00000536548 NSFL1CQ9UNZ2 370 aaKnown RBP9.29□□□□□ -0.92
CPSF7-216ENST00000536548 ANKRD31Q8N7Z5 1873 aa9.29□□□□□ -0.92
CPSF7-216ENST00000536548 ZNF541Q9H0D2 1346 aa9.29□□□□□ -0.92
CPSF7-216ENST00000536548 SLX4Q8IY92 1834 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-216ENST00000536548 TRAF5O00463 557 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 ZPR1O75312 459 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 ADCY5O95622 1261 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 MAP2K2P36507 400 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 UBE2HP62256 183 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 TAF3Q5VWG9 929 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 INTS5Q6P9B9 1019 aaKnown RBP9.28□□□□□ -0.92
CPSF7-216ENST00000536548 IFNL2Q8IZJ0 200 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 CCDC24Q8N4L8 307 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 OTUD7AQ8TE49 926 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-216ENST00000536548 USP25Q9UHP3 1055 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.28□□□□□ -0.92
CPSF7-216ENST00000536548 TRPM7Q96QT4 1865 aa9.28□□□□□ -0.92
CPSF7-216ENST00000536548 CHL1O00533 1208 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 SMARCA5O60264 1052 aaPredicted RBP9.27□□□□□ -0.93
CPSF7-216ENST00000536548 KDM4AO75164 1064 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 GNAI2P04899 355 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 GNAI3P08754 354 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 SYCP1Q15431 976 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 USP48Q86UV5 1035 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 LRRCC1Q9C099 1032 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 ANO2Q9NQ90 1003 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 STAP2Q9UGK3 403 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 TJP1Q07157 1748 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 LTBP3Q9NS15 1303 aa9.27□□□□□ -0.93
CPSF7-216ENST00000536548 RPAP1Q9BWH6 1393 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-216ENST00000536548 DLL1O00548 723 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 CA12O43570 354 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 CHMLP26374 656 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-216ENST00000536548 CIAPIN1Q6FI81 312 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 PNMA8AQ86V59 439 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-216ENST00000536548 AEBP1Q8IUX7 1158 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 PDCL2Q8N4E4 241 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 FOXD4L4Q8WXT5 416 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-216ENST00000536548 ZIC5Q96T25 663 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 MEIS3Q99687 375 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 FEZ1Q99689 392 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 BCL2L12Q9HB09 334 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 TLL2Q9Y6L7 1015 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 SOS1Q07889 1333 aaPredicted RBP9.26□□□□□ -0.93
CPSF7-216ENST00000536548 SALL3Q9BXA9 1300 aa9.26□□□□□ -0.93
CPSF7-216ENST00000536548 APBB1O00213 710 aa9.25□□□□□ -0.93
CPSF7-216ENST00000536548 ZSCAN22P10073 491 aaPredicted RBP9.25□□□□□ -0.93
CPSF7-216ENST00000536548 BICDL1Q6ZP65 573 aa9.25□□□□□ -0.93
CPSF7-216ENST00000536548 EMILIN1Q9Y6C2 1016 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms