RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ZC3H12CQ9C0D7 883 aaKnown RBP18.24■□□□□ 0.51
RTN3P1-201ENST00000536295 GREM2Q9H772 168 aa18.24■□□□□ 0.51
RTN3P1-201ENST00000536295 PODXL2Q9NZ53 605 aa18.24■□□□□ 0.51
RTN3P1-201ENST00000536295 GGA1Q9UJY5 639 aa18.24■□□□□ 0.51
RTN3P1-201ENST00000536295 ZBTB12Q9Y330 459 aaPredicted RBP18.24■□□□□ 0.51
RTN3P1-201ENST00000536295 SHTN1A0MZ66 631 aa18.23■□□□□ 0.51
RTN3P1-201ENST00000536295 G3V3G9 751 aa18.23■□□□□ 0.51
RTN3P1-201ENST00000536295 PSMD14O00487 310 aa18.23■□□□□ 0.51
RTN3P1-201ENST00000536295 FMR1Q06787 632 aaKnown RBP eCLIP18.23■□□□□ 0.51
RTN3P1-201ENST00000536295 DCAF8Q5TAQ9 597 aa18.23■□□□□ 0.51
RTN3P1-201ENST00000536295 KCNQ5Q9NR82 932 aa18.23■□□□□ 0.51
RTN3P1-201ENST00000536295 CNOT7Q9UIV1 285 aaKnown RBP18.23■□□□□ 0.51
RTN3P1-201ENST00000536295 F6X3S4 739 aa18.22■□□□□ 0.51
RTN3P1-201ENST00000536295 LINS1Q8NG48 757 aa18.22■□□□□ 0.51
RTN3P1-201ENST00000536295 CNTNAP1P78357 1384 aa18.21■□□□□ 0.51
RTN3P1-201ENST00000536295 TRAF5O00463 557 aa18.21■□□□□ 0.51
RTN3P1-201ENST00000536295 MICALL2Q8IY33 904 aa18.21■□□□□ 0.51
RTN3P1-201ENST00000536295 TRPM4Q8TD43 1214 aa18.21■□□□□ 0.51
RTN3P1-201ENST00000536295 XDHP47989 1333 aa18.21■□□□□ 0.51
RTN3P1-201ENST00000536295 H7C1D1 291 aa18.2■□□□□ 0.5
RTN3P1-201ENST00000536295 HSPA1AP0DMV8 641 aaKnown RBP18.2■□□□□ 0.5
RTN3P1-201ENST00000536295 HSPA1BP0DMV9 641 aaKnown RBP18.2■□□□□ 0.5
RTN3P1-201ENST00000536295 ABT1Q9ULW3 272 aaKnown RBP18.2■□□□□ 0.5
RTN3P1-201ENST00000536295 RTL9Q8NET4 1388 aa18.19■□□□□ 0.5
RTN3P1-201ENST00000536295 HIRAP54198 1017 aaPredicted RBP18.19■□□□□ 0.5
RTN3P1-201ENST00000536295 CASP7P55210 303 aa18.19■□□□□ 0.5
RTN3P1-201ENST00000536295 FAM161AQ3B820 660 aa18.19■□□□□ 0.5
RTN3P1-201ENST00000536295 BSDC1Q9NW68 430 aaPredicted RBP18.19■□□□□ 0.5
RTN3P1-201ENST00000536295 MYH3P11055 1940 aa18.19■□□□□ 0.5
RTN3P1-201ENST00000536295 ZNF521Q96K83 1311 aa18.19■□□□□ 0.5
RTN3P1-201ENST00000536295 SPEF2Q9C093 1822 aa18.19■□□□□ 0.5
RTN3P1-201ENST00000536295 WTIPA6NIX2 430 aaPredicted RBP18.18■□□□□ 0.5
RTN3P1-201ENST00000536295 ITGA6P23229 1130 aa18.18■□□□□ 0.5
RTN3P1-201ENST00000536295 ATP2B4P23634 1241 aa18.18■□□□□ 0.5
RTN3P1-201ENST00000536295 IGHMBP2P38935 993 aaKnown RBP18.18■□□□□ 0.5
RTN3P1-201ENST00000536295 VEGFBP49765 207 aa18.18■□□□□ 0.5
RTN3P1-201ENST00000536295 SAMD7Q7Z3H4 446 aa18.18■□□□□ 0.5
RTN3P1-201ENST00000536295 PLA2G12BQ9BX93 195 aa18.18■□□□□ 0.5
RTN3P1-201ENST00000536295 GLIS2Q9BZE0 524 aaPredicted RBP18.18■□□□□ 0.5
RTN3P1-201ENST00000536295 MINPP1Q9UNW1 487 aa18.18■□□□□ 0.5
RTN3P1-201ENST00000536295 CACNA1FO60840 1977 aa18.18■□□□□ 0.5
RTN3P1-201ENST00000536295 DEFB115Q30KQ5 88 aa18.17■□□□□ 0.5
RTN3P1-201ENST00000536295 TBC1D10BQ4KMP7 808 aaPredicted RBP18.17■□□□□ 0.5
RTN3P1-201ENST00000536295 BEND3Q5T5X7 828 aa18.17■□□□□ 0.5
RTN3P1-201ENST00000536295 RBM26Q5T8P6 1007 aaKnown RBP18.17■□□□□ 0.5
RTN3P1-201ENST00000536295 IFFO2Q5TF58 517 aa18.17■□□□□ 0.5
RTN3P1-201ENST00000536295 DPF2Q92785 391 aa18.17■□□□□ 0.5
RTN3P1-201ENST00000536295 PCNTO95613 3336 aa18.16■□□□□ 0.5
RTN3P1-201ENST00000536295 RPS12P25398 132 aaKnown RBP18.16■□□□□ 0.5
RTN3P1-201ENST00000536295 SLC4A10Q6U841 1118 aa18.16■□□□□ 0.5
RTN3P1-201ENST00000536295 CHMP3Q9Y3E7 222 aa18.16■□□□□ 0.5
RTN3P1-201ENST00000536295 EGFRP00533 1210 aa18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 CSF1RP07333 972 aa18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 VIL1P09327 827 aaKnown RBP18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 CCT4P50991 539 aaKnown RBP18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 COL13A1Q5TAT6 717 aaPredicted RBP18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 CST9Q5W186 159 aa18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 PAXIP1Q6ZW49 1069 aaPredicted RBP18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 ZC3H15Q8WU90 426 aaKnown RBP18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 MPHOSPH8Q99549 860 aa18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 ZNF408Q9H9D4 720 aa18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 PGAP2Q9UHJ9 254 aa18.15■□□□□ 0.5
RTN3P1-201ENST00000536295 SCN9AQ15858 1988 aa18.14■□□□□ 0.49
RTN3P1-201ENST00000536295 RASSF10A6NK89 507 aa18.14■□□□□ 0.49
RTN3P1-201ENST00000536295 CELF2O95319 508 aaKnown RBP18.14■□□□□ 0.49
RTN3P1-201ENST00000536295 ANKRD18BA2A2Z9 1011 aa18.13■□□□□ 0.49
RTN3P1-201ENST00000536295 E9PSI1 815 aa18.13■□□□□ 0.49
RTN3P1-201ENST00000536295 GRM1Q13255 1194 aa18.13■□□□□ 0.49
RTN3P1-201ENST00000536295 CDC37L1Q7L3B6 337 aa18.13■□□□□ 0.49
RTN3P1-201ENST00000536295 MED23Q9ULK4 1368 aa18.13■□□□□ 0.49
RTN3P1-201ENST00000536295 GRM8O00222 908 aa18.12■□□□□ 0.49
RTN3P1-201ENST00000536295 FOXO4P98177 505 aa18.12■□□□□ 0.49
RTN3P1-201ENST00000536295 KIF4BQ2VIQ3 1234 aa18.12■□□□□ 0.49
RTN3P1-201ENST00000536295 RSBN1LQ6PCB5 846 aaPredicted RBP18.12■□□□□ 0.49
RTN3P1-201ENST00000536295 USP48Q86UV5 1035 aa18.12■□□□□ 0.49
RTN3P1-201ENST00000536295 FBXW7Q969H0 707 aa18.12■□□□□ 0.49
RTN3P1-201ENST00000536295 C9orf78Q9NZ63 289 aaPredicted RBP18.12■□□□□ 0.49
RTN3P1-201ENST00000536295 USP17L3A6NCW0 530 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 USP17L4A6NCW7 530 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 IFIT5Q13325 482 aaKnown RBP18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 EPHA10Q5JZY3 1008 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 LMBR1LQ6UX01 489 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 DLK2Q6UY11 383 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 USP17L1Q7RTZ2 530 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 PODNQ7Z5L7 613 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 SRCIN1Q9C0H9 1055 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 ANKRD2Q9GZV1 360 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 LEMD3Q9Y2U8 911 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 WDR33Q9C0J8 1336 aaKnown RBP18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 TRPM7Q96QT4 1865 aa18.11■□□□□ 0.49
RTN3P1-201ENST00000536295 ZNF804BA4D1E1 1349 aa18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 ALDH1L1O75891 902 aa18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 KLRK1P26718 216 aa18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 KCNJ4P48050 445 aa18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 CHRNDQ07001 517 aa18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 SLFN5Q08AF3 891 aa18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 CYP4F22Q6NT55 531 aa18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 TXNRD3Q86VQ6 643 aa18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 MRPL50Q8N5N7 158 aaKnown RBP18.1■□□□□ 0.49
RTN3P1-201ENST00000536295 AGBL3Q8NEM8 1001 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms