RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 ELF2Q15723 593 aa16.46■□□□□ 0.22
LIG1-203ENST00000536218 FBXO38Q6PIJ6 1188 aa16.46■□□□□ 0.22
LIG1-203ENST00000536218 SYTL4Q96C24 671 aaPredicted RBP16.46■□□□□ 0.22
LIG1-203ENST00000536218 PLBD2Q8NHP8 589 aa16.45■□□□□ 0.22
LIG1-203ENST00000536218 TMOD3Q9NYL9 352 aa16.45■□□□□ 0.22
LIG1-203ENST00000536218 SGSM2O43147 1006 aa16.45■□□□□ 0.22
LIG1-203ENST00000536218 FIBPO43427 364 aa16.45■□□□□ 0.22
LIG1-203ENST00000536218 CHRM1P11229 460 aaPredicted RBP16.45■□□□□ 0.22
LIG1-203ENST00000536218 ASAP1Q9ULH1 1129 aa16.45■□□□□ 0.22
LIG1-203ENST00000536218 PAXBP1Q9Y5B6 917 aa16.45■□□□□ 0.22
LIG1-203ENST00000536218 C5P01031 1676 aa16.45■□□□□ 0.22
LIG1-203ENST00000536218 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
LIG1-203ENST00000536218 APPP05067 770 aa16.44■□□□□ 0.22
LIG1-203ENST00000536218 RBM6P78332 1123 aaKnown RBP16.44■□□□□ 0.22
LIG1-203ENST00000536218 LMBR1LQ6UX01 489 aa16.44■□□□□ 0.22
LIG1-203ENST00000536218 NEK11Q8NG66 645 aa16.44■□□□□ 0.22
LIG1-203ENST00000536218 NDUFB9Q9Y6M9 179 aa16.44■□□□□ 0.22
LIG1-203ENST00000536218 LOC102724159A0A0B4J2E5 919 aa16.44■□□□□ 0.22
LIG1-203ENST00000536218 PWP2Q15269 919 aaKnown RBP16.44■□□□□ 0.22
LIG1-203ENST00000536218 C10orf67Q8IYJ2 551 aa16.44■□□□□ 0.22
LIG1-203ENST00000536218 NRBP1Q9UHY1 535 aa16.44■□□□□ 0.22
LIG1-203ENST00000536218 CYP2C19P33261 490 aa16.44■□□□□ 0.22
LIG1-203ENST00000536218 EDC3Q96F86 508 aaKnown RBP16.44■□□□□ 0.22
LIG1-203ENST00000536218 POLR3GO15318 223 aaPredicted RBP16.43■□□□□ 0.22
LIG1-203ENST00000536218 CEP135Q66GS9 1140 aa16.43■□□□□ 0.22
LIG1-203ENST00000536218 GTF2A1P52655 376 aaPredicted RBP16.42■□□□□ 0.22
LIG1-203ENST00000536218 TFCP2Q12800 502 aa16.42■□□□□ 0.22
LIG1-203ENST00000536218 RASSF4Q9H2L5 321 aa16.42■□□□□ 0.22
LIG1-203ENST00000536218 ADAMTS7Q9UKP4 1686 aa16.42■□□□□ 0.22
LIG1-203ENST00000536218 N4BP2Q86UW6 1770 aaPredicted RBP16.42■□□□□ 0.22
LIG1-203ENST00000536218 CPA1P15085 419 aa16.42■□□□□ 0.22
LIG1-203ENST00000536218 DHX37Q8IY37 1157 aaKnown RBP16.42■□□□□ 0.22
LIG1-203ENST00000536218 CCDC85AQ96PX6 553 aaPredicted RBP16.42■□□□□ 0.22
LIG1-203ENST00000536218 PTPN12Q05209 780 aaKnown RBP16.42■□□□□ 0.22
LIG1-203ENST00000536218 RASEFQ8IZ41 740 aa16.42■□□□□ 0.22
LIG1-203ENST00000536218 FAM227BQ96M60 508 aa16.42■□□□□ 0.22
LIG1-203ENST00000536218 ADAMTS2O95450 1211 aa16.41■□□□□ 0.22
LIG1-203ENST00000536218 DNAJC10Q8IXB1 793 aa16.41■□□□□ 0.22
LIG1-203ENST00000536218 CRYBG1Q9Y4K1 1723 aa16.41■□□□□ 0.22
LIG1-203ENST00000536218 DTNBO60941 627 aa16.41■□□□□ 0.22
LIG1-203ENST00000536218 GYS2P54840 703 aa16.41■□□□□ 0.22
LIG1-203ENST00000536218 PTH1RQ03431 593 aa16.41■□□□□ 0.22
LIG1-203ENST00000536218 PIGBQ92521 554 aa16.41■□□□□ 0.22
LIG1-203ENST00000536218 FSD1Q9BTV5 496 aa16.41■□□□□ 0.22
LIG1-203ENST00000536218 HSPA4P34932 840 aa16.4■□□□□ 0.22
LIG1-203ENST00000536218 NKX1-1Q15270 411 aaPredicted RBP16.4■□□□□ 0.22
LIG1-203ENST00000536218 LSG1Q9H089 658 aaKnown RBP16.4■□□□□ 0.22
LIG1-203ENST00000536218 EFCC1Q9HA90 598 aa16.4■□□□□ 0.22
LIG1-203ENST00000536218 TRIM66O15016 1216 aa16.4■□□□□ 0.22
LIG1-203ENST00000536218 EVI5LQ96CN4 794 aa16.4■□□□□ 0.22
LIG1-203ENST00000536218 TOMM22Q9NS69 142 aa16.4■□□□□ 0.22
LIG1-203ENST00000536218 CWC25Q9NXE8 425 aaPredicted RBP16.4■□□□□ 0.22
LIG1-203ENST00000536218 WDR33Q9C0J8 1336 aaKnown RBP16.4■□□□□ 0.22
LIG1-203ENST00000536218 TRIM5Q9C035 493 aa16.4■□□□□ 0.22
LIG1-203ENST00000536218 PRPF40BQ6NWY9 871 aaKnown RBP16.39■□□□□ 0.21
LIG1-203ENST00000536218 SYT10Q6XYQ8 523 aa16.39■□□□□ 0.21
LIG1-203ENST00000536218 RUFY2Q8WXA3 655 aa16.39■□□□□ 0.21
LIG1-203ENST00000536218 ZNF594Q96JF6 807 aaPredicted RBP16.39■□□□□ 0.21
LIG1-203ENST00000536218 NEUROD6Q96NK8 337 aa16.39■□□□□ 0.21
LIG1-203ENST00000536218 SNX14Q9Y5W7 946 aa16.39■□□□□ 0.21
LIG1-203ENST00000536218 USP42Q9H9J4 1324 aaKnown RBP16.39■□□□□ 0.21
LIG1-203ENST00000536218 ANAPC15P60006 121 aa16.39■□□□□ 0.21
LIG1-203ENST00000536218 KRBA2Q6ZNG9 492 aa16.39■□□□□ 0.21
LIG1-203ENST00000536218 LUZP1Q86V48 1076 aa16.39■□□□□ 0.21
LIG1-203ENST00000536218 RAD50Q92878 1312 aa16.39■□□□□ 0.21
LIG1-203ENST00000536218 RFX5P48382 616 aaPredicted RBP16.38■□□□□ 0.21
LIG1-203ENST00000536218 COPRSQ9NQ92 184 aa16.38■□□□□ 0.21
LIG1-203ENST00000536218 MRC1P22897 1456 aa16.38■□□□□ 0.21
LIG1-203ENST00000536218 NMIQ13287 307 aaPredicted RBP16.38■□□□□ 0.21
LIG1-203ENST00000536218 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.38■□□□□ 0.21
LIG1-203ENST00000536218 UBE2HP62256 183 aa16.38■□□□□ 0.21
LIG1-203ENST00000536218 BMS1Q14692 1282 aaKnown RBP16.38■□□□□ 0.21
LIG1-203ENST00000536218 DBNDD2Q9BQY9 259 aa16.38■□□□□ 0.21
LIG1-203ENST00000536218 DBNLQ9UJU6 430 aaKnown RBP16.38■□□□□ 0.21
LIG1-203ENST00000536218 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
LIG1-203ENST00000536218 ZSCAN25Q6NSZ9 544 aa16.37■□□□□ 0.21
LIG1-203ENST00000536218 ZNF446Q9NWS9 450 aa16.37■□□□□ 0.21
LIG1-203ENST00000536218 TRMT1Q9NXH9 659 aaKnown RBP16.37■□□□□ 0.21
LIG1-203ENST00000536218 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.37■□□□□ 0.21
LIG1-203ENST00000536218 MYCNP04198 464 aaPredicted RBP16.37■□□□□ 0.21
LIG1-203ENST00000536218 CHGBP05060 677 aa16.37■□□□□ 0.21
LIG1-203ENST00000536218 CCDC192P0DO97 292 aa16.37■□□□□ 0.21
LIG1-203ENST00000536218 CASP7P55210 303 aa16.37■□□□□ 0.21
LIG1-203ENST00000536218 TNNI3KQ59H18 835 aa16.37■□□□□ 0.21
LIG1-203ENST00000536218 FPGT-TNNI3KV9GXZ4 949 aa16.37■□□□□ 0.21
LIG1-203ENST00000536218 CAMK4Q16566 473 aa16.36■□□□□ 0.21
LIG1-203ENST00000536218 TEX35Q5T0J7 233 aa16.36■□□□□ 0.21
LIG1-203ENST00000536218 PKD1L3Q7Z443 1732 aa16.36■□□□□ 0.21
LIG1-203ENST00000536218 NUTM2BA6NNL0 878 aaPredicted RBP16.36■□□□□ 0.21
LIG1-203ENST00000536218 NUTM2EB1AL46 878 aaPredicted RBP16.36■□□□□ 0.21
LIG1-203ENST00000536218 H7C1W4 665 aa16.36■□□□□ 0.21
LIG1-203ENST00000536218 CASTP20810 708 aaKnown RBP16.36■□□□□ 0.21
LIG1-203ENST00000536218 TIMM10P62072 90 aa16.36■□□□□ 0.21
LIG1-203ENST00000536218 FOXO4P98177 505 aa16.36■□□□□ 0.21
LIG1-203ENST00000536218 NUTM2AQ8IVF1 878 aaPredicted RBP16.36■□□□□ 0.21
LIG1-203ENST00000536218 GPTP24298 496 aa16.36■□□□□ 0.21
LIG1-203ENST00000536218 PTPN14Q15678 1187 aa16.36■□□□□ 0.21
LIG1-203ENST00000536218 RABL6Q3YEC7 729 aaPredicted RBP16.36■□□□□ 0.21
LIG1-203ENST00000536218 GPATCH11Q8N954 259 aa16.36■□□□□ 0.21
LIG1-203ENST00000536218 ATG3Q9NT62 314 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 251.9 ms