RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 AKTIPQ9H8T0 292 aa6.93□□□□□ -1.3
YBX3-205ENST00000536107 PRM3Q9NNZ6 103 aa6.93□□□□□ -1.3
YBX3-205ENST00000536107 FRRS1LQ9P0K9 344 aa6.93□□□□□ -1.3
YBX3-205ENST00000536107 ATP10AO60312 1499 aa6.92□□□□□ -1.3
YBX3-205ENST00000536107 MAGI2Q86UL8 1455 aa6.92□□□□□ -1.3
YBX3-205ENST00000536107 PTCD1O75127 700 aaKnown RBP6.92□□□□□ -1.3
YBX3-205ENST00000536107 PCSK7Q16549 785 aa6.92□□□□□ -1.3
YBX3-205ENST00000536107 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
YBX3-205ENST00000536107 TNS4Q8IZW8 715 aa6.92□□□□□ -1.3
YBX3-205ENST00000536107 TMEM130Q8N3G9 435 aa6.92□□□□□ -1.3
YBX3-205ENST00000536107 NOD1Q9Y239 953 aa6.92□□□□□ -1.3
YBX3-205ENST00000536107 C9orf84Q5VXU9 1444 aa6.92□□□□□ -1.3
YBX3-205ENST00000536107 DLL1O00548 723 aa6.91□□□□□ -1.3
YBX3-205ENST00000536107 BRPF1P55201 1214 aaPredicted RBP6.91□□□□□ -1.3
YBX3-205ENST00000536107 PSMA6P60900 246 aaKnown RBP6.91□□□□□ -1.3
YBX3-205ENST00000536107 GTF2IP78347 998 aa6.91□□□□□ -1.3
YBX3-205ENST00000536107 JAG1P78504 1218 aa6.91□□□□□ -1.3
YBX3-205ENST00000536107 VAC14Q08AM6 782 aa6.91□□□□□ -1.3
YBX3-205ENST00000536107 EML3Q32P44 896 aa6.91□□□□□ -1.3
YBX3-205ENST00000536107 FAM35AQ86V20 835 aa6.91□□□□□ -1.3
YBX3-205ENST00000536107 GSX2Q9BZM3 304 aa6.91□□□□□ -1.3
YBX3-205ENST00000536107 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.91□□□□□ -1.3
YBX3-205ENST00000536107 UGGT2Q9NYU1 1516 aa6.91□□□□□ -1.3
YBX3-205ENST00000536107 ABCA9Q8IUA7 1624 aa6.9□□□□□ -1.3
YBX3-205ENST00000536107 LZTS3O60299 673 aaPredicted RBP6.9□□□□□ -1.3
YBX3-205ENST00000536107 DEAF1O75398 565 aaPredicted RBP6.9□□□□□ -1.3
YBX3-205ENST00000536107 TGFB1P01137 390 aa6.9□□□□□ -1.3
YBX3-205ENST00000536107 IGLV1-40P01703 118 aa6.9□□□□□ -1.3
YBX3-205ENST00000536107 BTLAQ7Z6A9 289 aa6.9□□□□□ -1.3
YBX3-205ENST00000536107 TTC9Q92623 222 aa6.9□□□□□ -1.3
YBX3-205ENST00000536107 LPIN3Q9BQK8 851 aa6.9□□□□□ -1.3
YBX3-205ENST00000536107 PHACTR1Q9C0D0 580 aa6.9□□□□□ -1.3
YBX3-205ENST00000536107 ATP10BO94823 1461 aa6.9□□□□□ -1.31
YBX3-205ENST00000536107 SPINK2P20155 84 aa6.89□□□□□ -1.31
YBX3-205ENST00000536107 PNMA5Q96PV4 448 aa6.89□□□□□ -1.31
YBX3-205ENST00000536107 MRPL18Q9H0U6 180 aaKnown RBP6.89□□□□□ -1.31
YBX3-205ENST00000536107 RAXQ9Y2V3 346 aa6.89□□□□□ -1.31
YBX3-205ENST00000536107 CHMP3Q9Y3E7 222 aa6.89□□□□□ -1.31
YBX3-205ENST00000536107 HCN4Q9Y3Q4 1203 aa6.89□□□□□ -1.31
YBX3-205ENST00000536107 CPS1P31327 1500 aa6.89□□□□□ -1.31
YBX3-205ENST00000536107 SETD1AO15047 1707 aaKnown RBP6.89□□□□□ -1.31
YBX3-205ENST00000536107 SIGLEC1Q9BZZ2 1709 aa6.89□□□□□ -1.31
YBX3-205ENST00000536107 SETD1BQ9UPS6 1966 aaKnown RBP6.88□□□□□ -1.31
YBX3-205ENST00000536107 ABCA8O94911 1581 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 SCAPERQ9BY12 1400 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 PLEKHD1A6NEE1 506 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 ADAMTS4O75173 837 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 CPB1P15086 417 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 SOX11P35716 441 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 PSME1Q06323 249 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 SEMA3FQ13275 785 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 CCINQ13939 588 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 INTS5Q6P9B9 1019 aaKnown RBP6.88□□□□□ -1.31
YBX3-205ENST00000536107 Q6ZS46 218 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 IL27Q8NEV9 243 aa6.88□□□□□ -1.31
YBX3-205ENST00000536107 ZMYM4Q5VZL5 1548 aa6.87□□□□□ -1.31
YBX3-205ENST00000536107 GOLGA3Q08378 1498 aa6.87□□□□□ -1.31
YBX3-205ENST00000536107 SHANK2Q9UPX8 1470 aa6.87□□□□□ -1.31
YBX3-205ENST00000536107 F8W735 103 aaPredicted RBP6.87□□□□□ -1.31
YBX3-205ENST00000536107 ALX3O95076 343 aa6.87□□□□□ -1.31
YBX3-205ENST00000536107 NFKB1P19838 968 aa6.87□□□□□ -1.31
YBX3-205ENST00000536107 HIF1AQ16665 826 aa6.87□□□□□ -1.31
YBX3-205ENST00000536107 PERM1Q5SV97 790 aa6.87□□□□□ -1.31
YBX3-205ENST00000536107 MEX3CQ5U5Q3 659 aaKnown RBP6.87□□□□□ -1.31
YBX3-205ENST00000536107 HECW1Q76N89 1606 aa6.87□□□□□ -1.31
YBX3-205ENST00000536107 MAP3K6O95382 1288 aa6.86□□□□□ -1.31
YBX3-205ENST00000536107 PLAURQ03405 335 aa6.86□□□□□ -1.31
YBX3-205ENST00000536107 WASHC4Q2M389 1173 aa6.86□□□□□ -1.31
YBX3-205ENST00000536107 ELMSAN1Q6PJG2 1045 aa6.86□□□□□ -1.31
YBX3-205ENST00000536107 RICTORQ6R327 1708 aa6.86□□□□□ -1.31
YBX3-205ENST00000536107 PIK3CDO00329 1044 aa6.85□□□□□ -1.31
YBX3-205ENST00000536107 RXRBP28702 533 aa6.85□□□□□ -1.31
YBX3-205ENST00000536107 GRIK1P39086 918 aa6.85□□□□□ -1.31
YBX3-205ENST00000536107 ZNF772Q68DY9 489 aaPredicted RBP6.85□□□□□ -1.31
YBX3-205ENST00000536107 DTX1Q86Y01 620 aa6.85□□□□□ -1.31
YBX3-205ENST00000536107 ZDHHC13Q8IUH4 622 aa6.85□□□□□ -1.31
YBX3-205ENST00000536107 TRPM4Q8TD43 1214 aa6.85□□□□□ -1.31
YBX3-205ENST00000536107 TSPAN10Q9H1Z9 355 aaPredicted RBP6.85□□□□□ -1.31
YBX3-205ENST00000536107 PLA2R1Q13018 1463 aa6.85□□□□□ -1.31
YBX3-205ENST00000536107 IER5Q5VY09 327 aa6.84□□□□□ -1.31
YBX3-205ENST00000536107 STOML1Q9UBI4 398 aa6.84□□□□□ -1.31
YBX3-205ENST00000536107 ADGRE2Q9UHX3 823 aa6.84□□□□□ -1.31
YBX3-205ENST00000536107 TCOF1Q13428 1488 aaKnown RBP6.84□□□□□ -1.31
YBX3-205ENST00000536107 RAPGEF2Q9Y4G8 1499 aa6.84□□□□□ -1.31
YBX3-205ENST00000536107 CNTLNQ9NXG0 1405 aa6.84□□□□□ -1.32
YBX3-205ENST00000536107 ZBTB42B2RXF5 422 aa6.83□□□□□ -1.32
YBX3-205ENST00000536107 WNT11O96014 354 aa6.83□□□□□ -1.32
YBX3-205ENST00000536107 AFAP1Q8N556 730 aa6.83□□□□□ -1.32
YBX3-205ENST00000536107 DCAF11Q8TEB1 546 aa6.83□□□□□ -1.32
YBX3-205ENST00000536107 SRA1Q9HD15 236 aaKnown RBP6.83□□□□□ -1.32
YBX3-205ENST00000536107 NPATQ14207 1427 aa6.83□□□□□ -1.32
YBX3-205ENST00000536107 ZMYM3Q14202 1370 aa6.82□□□□□ -1.32
YBX3-205ENST00000536107 C3P01024 1663 aa6.82□□□□□ -1.32
YBX3-205ENST00000536107 SKIP12755 728 aa6.82□□□□□ -1.32
YBX3-205ENST00000536107 NCOA4Q13772 614 aa6.82□□□□□ -1.32
YBX3-205ENST00000536107 EFCAB2Q5VUJ9 269 aa6.82□□□□□ -1.32
YBX3-205ENST00000536107 ANKLE2Q86XL3 938 aa6.82□□□□□ -1.32
YBX3-205ENST00000536107 ALDH16A1Q8IZ83 802 aa6.82□□□□□ -1.32
YBX3-205ENST00000536107 NFATC2IPQ8NCF5 419 aa6.82□□□□□ -1.32
YBX3-205ENST00000536107 CFAP74Q9C0B2 1584 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms