RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 ZC3H12CQ9C0D7 883 aaKnown RBP10.48□□□□□ -0.73
CHFR-211ENST00000535897 SAGE1Q9NXZ1 904 aa10.48□□□□□ -0.73
CHFR-211ENST00000535897 GGA3Q9NZ52 723 aa10.48□□□□□ -0.73
CHFR-211ENST00000535897 AKAP11Q9UKA4 1901 aa10.48□□□□□ -0.73
CHFR-211ENST00000535897 FAM155AB1AL88 458 aaPredicted RBP10.47□□□□□ -0.73
CHFR-211ENST00000535897 SOX10P56693 466 aa10.47□□□□□ -0.73
CHFR-211ENST00000535897 CCDC146Q8IYE0 955 aa10.47□□□□□ -0.73
CHFR-211ENST00000535897 KCNQ5Q9NR82 932 aa10.47□□□□□ -0.73
CHFR-211ENST00000535897 ANKIB1Q9P2G1 1089 aa10.47□□□□□ -0.73
CHFR-211ENST00000535897 DBF4Q9UBU7 674 aaPredicted RBP10.47□□□□□ -0.73
CHFR-211ENST00000535897 POLLQ9UGP5 575 aa10.47□□□□□ -0.73
CHFR-211ENST00000535897 RTL9Q8NET4 1388 aa10.47□□□□□ -0.73
CHFR-211ENST00000535897 IRS4O14654 1257 aaPredicted RBP10.46□□□□□ -0.73
CHFR-211ENST00000535897 UFL1O94874 794 aa10.46□□□□□ -0.73
CHFR-211ENST00000535897 RPS8P62241 208 aaKnown RBP10.46□□□□□ -0.73
CHFR-211ENST00000535897 SF3B3Q15393 1217 aaKnown RBP10.46□□□□□ -0.73
CHFR-211ENST00000535897 TBC1D16Q8TBP0 767 aa10.46□□□□□ -0.73
CHFR-211ENST00000535897 CDCA5Q96FF9 252 aa10.46□□□□□ -0.73
CHFR-211ENST00000535897 RNF186Q9NXI6 227 aa10.46□□□□□ -0.73
CHFR-211ENST00000535897 COL4A1P02462 1669 aa10.45□□□□□ -0.74
CHFR-211ENST00000535897 ASTN2O75129 1339 aaPredicted RBP10.45□□□□□ -0.74
CHFR-211ENST00000535897 SLC10A3P09131 477 aa10.45□□□□□ -0.74
CHFR-211ENST00000535897 ANGEL2Q5VTE6 544 aaKnown RBP10.45□□□□□ -0.74
CHFR-211ENST00000535897 ISCA1Q9BUE6 129 aa10.45□□□□□ -0.74
CHFR-211ENST00000535897 HYPKQ9NX55 129 aa10.45□□□□□ -0.74
CHFR-211ENST00000535897 SCN9AQ15858 1988 aa10.45□□□□□ -0.74
CHFR-211ENST00000535897 CHL1O00533 1208 aa10.44□□□□□ -0.74
CHFR-211ENST00000535897 HSP90B1P14625 803 aaKnown RBP10.44□□□□□ -0.74
CHFR-211ENST00000535897 GOLGA2Q08379 1002 aa10.44□□□□□ -0.74
CHFR-211ENST00000535897 WDR43Q15061 677 aaKnown RBP eCLIP10.44□□□□□ -0.74
CHFR-211ENST00000535897 RIC3Q7Z5B4 369 aa10.44□□□□□ -0.74
CHFR-211ENST00000535897 GGA1Q9UJY5 639 aa10.44□□□□□ -0.74
CHFR-211ENST00000535897 VIL1P09327 827 aaKnown RBP10.43□□□□□ -0.74
CHFR-211ENST00000535897 SCARF1Q14162 830 aa10.43□□□□□ -0.74
CHFR-211ENST00000535897 RALBP1Q15311 655 aa10.43□□□□□ -0.74
CHFR-211ENST00000535897 RSBN1LQ6PCB5 846 aaPredicted RBP10.43□□□□□ -0.74
CHFR-211ENST00000535897 CTU1Q7Z7A3 348 aaKnown RBP10.43□□□□□ -0.74
CHFR-211ENST00000535897 CCDC85AQ96PX6 553 aaPredicted RBP10.43□□□□□ -0.74
CHFR-211ENST00000535897 CSRNP1Q96S65 589 aa10.43□□□□□ -0.74
CHFR-211ENST00000535897 SEC31BQ9NQW1 1179 aa10.43□□□□□ -0.74
CHFR-211ENST00000535897 HOXB7P09629 217 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 USP17L8P0C7I0 530 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 TTLL12Q14166 644 aaPredicted RBP10.42□□□□□ -0.74
CHFR-211ENST00000535897 CCDC152Q4G0S7 254 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 DUSP27Q5VZP5 1158 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 RASAL3Q86YV0 1011 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 REM2Q8IYK8 340 aaPredicted RBP10.42□□□□□ -0.74
CHFR-211ENST00000535897 ZBTB38Q8NAP3 1195 aaPredicted RBP10.42□□□□□ -0.74
CHFR-211ENST00000535897 AGBL3Q8NEM8 1001 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 RUNDC1Q96C34 613 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 MYD88Q99836 296 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 MYOZ2Q9NPC6 264 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 PODXL2Q9NZ53 605 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 PCDH10Q9P2E7 1040 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 HDAC9Q9UKV0 1011 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 PAPPA2Q9BXP8 1791 aa10.42□□□□□ -0.74
CHFR-211ENST00000535897 ZNF280AP59817 542 aaPredicted RBP10.41□□□□□ -0.74
CHFR-211ENST00000535897 FKBP1BP68106 108 aa10.41□□□□□ -0.74
CHFR-211ENST00000535897 FBXW7Q969H0 707 aa10.41□□□□□ -0.74
CHFR-211ENST00000535897 SCAF8Q9UPN6 1271 aaKnown RBP10.41□□□□□ -0.74
CHFR-211ENST00000535897 TRIM35Q9UPQ4 493 aa10.41□□□□□ -0.74
CHFR-211ENST00000535897 PSME4Q14997 1843 aa10.4□□□□□ -0.74
CHFR-211ENST00000535897 XDHP47989 1333 aa10.4□□□□□ -0.74
CHFR-211ENST00000535897 USP17L3A6NCW0 530 aa10.4□□□□□ -0.74
CHFR-211ENST00000535897 USP17L4A6NCW7 530 aa10.4□□□□□ -0.74
CHFR-211ENST00000535897 ELL2O00472 640 aaPredicted RBP10.4□□□□□ -0.74
CHFR-211ENST00000535897 TRIM28Q13263 835 aaKnown RBP10.4□□□□□ -0.74
CHFR-211ENST00000535897 MOB2Q70IA6 237 aa10.4□□□□□ -0.74
CHFR-211ENST00000535897 USP17L1Q7RTZ2 530 aa10.4□□□□□ -0.74
CHFR-211ENST00000535897 ANKRD18AQ8IVF6 992 aa10.4□□□□□ -0.74
CHFR-211ENST00000535897 JARID2Q92833 1246 aaPredicted RBP10.4□□□□□ -0.74
CHFR-211ENST00000535897 CWC25Q9NXE8 425 aaPredicted RBP10.4□□□□□ -0.74
CHFR-211ENST00000535897 HPS5Q9UPZ3 1129 aa10.4□□□□□ -0.74
CHFR-211ENST00000535897 MYBBP1AQ9BQG0 1328 aaKnown RBP10.39□□□□□ -0.75
CHFR-211ENST00000535897 PITPNM2Q9BZ72 1349 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 UBE2Q2LH0YL09 131 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 PDE8AO60658 829 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 TBC1D8O95759 1140 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 NF2P35240 595 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 MKRN3Q13064 507 aaKnown RBP10.39□□□□□ -0.75
CHFR-211ENST00000535897 PRAMEF18Q5VWM3 479 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 OGFOD1Q8N543 542 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 CCDC191Q8NCU4 936 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 PHAXQ9H814 394 aaKnown RBP10.39□□□□□ -0.75
CHFR-211ENST00000535897 MBIPQ9NS73 344 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 SPEF2Q9C093 1822 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 ZNF609O15014 1411 aa10.39□□□□□ -0.75
CHFR-211ENST00000535897 DDX58O95786 925 aaKnown RBP10.38□□□□□ -0.75
CHFR-211ENST00000535897 PCCAP05165 728 aaPredicted RBP10.38□□□□□ -0.75
CHFR-211ENST00000535897 ATP2B4P23634 1241 aa10.38□□□□□ -0.75
CHFR-211ENST00000535897 PKN2Q16513 984 aaKnown RBP10.38□□□□□ -0.75
CHFR-211ENST00000535897 NBPF9Q3BBW0 867 aa10.38□□□□□ -0.75
CHFR-211ENST00000535897 PRPF38BQ5VTL8 546 aaKnown RBP10.38□□□□□ -0.75
CHFR-211ENST00000535897 PODNQ7Z5L7 613 aa10.38□□□□□ -0.75
CHFR-211ENST00000535897 ZNF296Q8WUU4 475 aaPredicted RBP10.38□□□□□ -0.75
CHFR-211ENST00000535897 CDC5LQ99459 802 aaKnown RBP10.38□□□□□ -0.75
CHFR-211ENST00000535897 GMLQ99445 158 aa10.37□□□□□ -0.75
CHFR-211ENST00000535897 MXD3Q9BW11 206 aa10.37□□□□□ -0.75
CHFR-211ENST00000535897 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.37□□□□□ -0.75
CHFR-211ENST00000535897 ADAMTS8Q9UP79 889 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms