RNA–Protein interactions for RNA: ENST00000535739.5

LTBR-205, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-205ENST00000535739 DDX58O95786 925 aaKnown RBP26.56■■□□□ 1.84
LTBR-205ENST00000535739 HSP90B1P14625 803 aaKnown RBP26.56■■□□□ 1.84
LTBR-205ENST00000535739 DPF2Q92785 391 aa26.56■■□□□ 1.84
LTBR-205ENST00000535739 TSR2Q969E8 191 aaKnown RBP26.56■■□□□ 1.84
LTBR-205ENST00000535739 CCDC85AQ96PX6 553 aaPredicted RBP26.56■■□□□ 1.84
LTBR-205ENST00000535739 PDE8AO60658 829 aa26.55■■□□□ 1.84
LTBR-205ENST00000535739 HSPA8P11142 646 aaKnown RBP26.55■■□□□ 1.84
LTBR-205ENST00000535739 SAMD7Q7Z3H4 446 aa26.55■■□□□ 1.84
LTBR-205ENST00000535739 MAP3K2Q9Y2U5 619 aa26.55■■□□□ 1.84
LTBR-205ENST00000535739 CCDC152Q4G0S7 254 aa26.54■■□□□ 1.84
LTBR-205ENST00000535739 CDC37L1Q7L3B6 337 aa26.54■■□□□ 1.84
LTBR-205ENST00000535739 SAPCD2Q86UD0 394 aa26.54■■□□□ 1.84
LTBR-205ENST00000535739 CHMP4AQ9BY43 222 aa26.54■■□□□ 1.84
LTBR-205ENST00000535739 ZNF408Q9H9D4 720 aa26.54■■□□□ 1.84
LTBR-205ENST00000535739 PODXL2Q9NZ53 605 aa26.54■■□□□ 1.84
LTBR-205ENST00000535739 RTL9Q8NET4 1388 aa26.54■■□□□ 1.84
LTBR-205ENST00000535739 ANKIB1Q9P2G1 1089 aa26.53■■□□□ 1.84
LTBR-205ENST00000535739 UFL1O94874 794 aa26.52■■□□□ 1.84
LTBR-205ENST00000535739 EGFRP00533 1210 aa26.52■■□□□ 1.84
LTBR-205ENST00000535739 TBC1D10BQ4KMP7 808 aaPredicted RBP26.52■■□□□ 1.84
LTBR-205ENST00000535739 ZC3H12CQ9C0D7 883 aaKnown RBP26.52■■□□□ 1.84
LTBR-205ENST00000535739 MYH3P11055 1940 aa26.51■■□□□ 1.83
LTBR-205ENST00000535739 AOC2O75106 756 aa26.51■■□□□ 1.83
LTBR-205ENST00000535739 DLK2Q6UY11 383 aa26.51■■□□□ 1.83
LTBR-205ENST00000535739 USP48Q86UV5 1035 aa26.51■■□□□ 1.83
LTBR-205ENST00000535739 GGA1Q9UJY5 639 aa26.51■■□□□ 1.83
LTBR-205ENST00000535739 PI4KAP2A4QPH2 592 aa26.5■■□□□ 1.83
LTBR-205ENST00000535739 RPS12P25398 132 aaKnown RBP26.5■■□□□ 1.83
LTBR-205ENST00000535739 KSR2Q6VAB6 950 aa26.5■■□□□ 1.83
LTBR-205ENST00000535739 PI4KAP1Q8N8J0 262 aa26.5■■□□□ 1.83
LTBR-205ENST00000535739 IGKV5-2P06315 115 aa26.49■■□□□ 1.83
LTBR-205ENST00000535739 RBM26Q5T8P6 1007 aaKnown RBP26.49■■□□□ 1.83
LTBR-205ENST00000535739 WWC1Q8IX03 1113 aa26.49■■□□□ 1.83
LTBR-205ENST00000535739 SPEF2Q9C093 1822 aa26.49■■□□□ 1.83
LTBR-205ENST00000535739 G3V3G9 751 aa26.48■■□□□ 1.83
LTBR-205ENST00000535739 CCDC27Q2M243 656 aa26.48■■□□□ 1.83
LTBR-205ENST00000535739 DCAF8Q5TAQ9 597 aa26.48■■□□□ 1.83
LTBR-205ENST00000535739 ANKRD18AQ8IVF6 992 aa26.48■■□□□ 1.83
LTBR-205ENST00000535739 BEGAINQ9BUH8 593 aa26.48■■□□□ 1.83
LTBR-205ENST00000535739 STK31Q9BXU1 1019 aa26.48■■□□□ 1.83
LTBR-205ENST00000535739 VIL1P09327 827 aaKnown RBP26.47■■□□□ 1.83
LTBR-205ENST00000535739 HHIPL1Q96JK4 782 aa26.47■■□□□ 1.83
LTBR-205ENST00000535739 PSME4Q14997 1843 aa26.46■■□□□ 1.83
LTBR-205ENST00000535739 MAP2K2P36507 400 aa26.46■■□□□ 1.83
LTBR-205ENST00000535739 CTSWP56202 376 aa26.46■■□□□ 1.83
LTBR-205ENST00000535739 TWISTNBQ3B726 338 aaPredicted RBP26.46■■□□□ 1.83
LTBR-205ENST00000535739 G2E3Q7L622 706 aa26.46■■□□□ 1.83
LTBR-205ENST00000535739 NEXNQ0ZGT2 675 aa26.45■■□□□ 1.82
LTBR-205ENST00000535739 CWF19L2Q2TBE0 894 aaKnown RBP26.45■■□□□ 1.82
LTBR-205ENST00000535739 KRT26Q7Z3Y9 468 aa26.45■■□□□ 1.82
LTBR-205ENST00000535739 XDHP47989 1333 aa26.44■■□□□ 1.82
LTBR-205ENST00000535739 TTLL11Q8NHH1 800 aa26.44■■□□□ 1.82
LTBR-205ENST00000535739 SLC4A2P04920 1241 aa26.43■■□□□ 1.82
LTBR-205ENST00000535739 KIF4BQ2VIQ3 1234 aa26.43■■□□□ 1.82
LTBR-205ENST00000535739 DCPSQ96C86 337 aaKnown RBP26.43■■□□□ 1.82
LTBR-205ENST00000535739 CDC5LQ99459 802 aaKnown RBP26.43■■□□□ 1.82
LTBR-205ENST00000535739 TSKSQ9UJT2 592 aa26.43■■□□□ 1.82
LTBR-205ENST00000535739 CACNA1FO60840 1977 aa26.42■■□□□ 1.82
LTBR-205ENST00000535739 WTIPA6NIX2 430 aaPredicted RBP26.42■■□□□ 1.82
LTBR-205ENST00000535739 NEURL1BA8MQ27 555 aa26.42■■□□□ 1.82
LTBR-205ENST00000535739 ADM5C9JUS6 153 aa26.42■■□□□ 1.82
LTBR-205ENST00000535739 ATP2B4P23634 1241 aa26.42■■□□□ 1.82
LTBR-205ENST00000535739 GREM2Q9H772 168 aa26.42■■□□□ 1.82
LTBR-205ENST00000535739 HUNKP57058 714 aa26.41■■□□□ 1.82
LTBR-205ENST00000535739 ASTN2O75129 1339 aaPredicted RBP26.4■■□□□ 1.82
LTBR-205ENST00000535739 IL16Q14005 1332 aa26.4■■□□□ 1.82
LTBR-205ENST00000535739 RSBN1LQ6PCB5 846 aaPredicted RBP26.4■■□□□ 1.82
LTBR-205ENST00000535739 MRS2Q9HD23 443 aa26.4■■□□□ 1.82
LTBR-205ENST00000535739 CASP8AP2Q9UKL3 1982 aa26.39■■□□□ 1.82
LTBR-205ENST00000535739 UBE3BQ7Z3V4 1068 aa26.39■■□□□ 1.82
LTBR-205ENST00000535739 AGBL3Q8NEM8 1001 aa26.39■■□□□ 1.82
LTBR-205ENST00000535739 BSDC1Q9NW68 430 aaPredicted RBP26.39■■□□□ 1.82
LTBR-205ENST00000535739 GGA3Q9NZ52 723 aa26.39■■□□□ 1.82
LTBR-205ENST00000535739 MINPP1Q9UNW1 487 aa26.39■■□□□ 1.82
LTBR-205ENST00000535739 H7C1W4 665 aa26.38■■□□□ 1.81
LTBR-205ENST00000535739 BRPF1P55201 1214 aaPredicted RBP26.38■■□□□ 1.81
LTBR-205ENST00000535739 ZIC5Q96T25 663 aa26.38■■□□□ 1.81
LTBR-205ENST00000535739 GBA2Q9HCG7 927 aaPredicted RBP26.38■■□□□ 1.81
LTBR-205ENST00000535739 SALL2Q9Y467 1007 aaPredicted RBP26.38■■□□□ 1.81
LTBR-205ENST00000535739 ZNF280AP59817 542 aaPredicted RBP26.37■■□□□ 1.81
LTBR-205ENST00000535739 FLIIQ13045 1269 aa26.37■■□□□ 1.81
LTBR-205ENST00000535739 ZNF609O15014 1411 aa26.37■■□□□ 1.81
LTBR-205ENST00000535739 FANCIQ9NVI1 1328 aa26.37■■□□□ 1.81
LTBR-205ENST00000535739 NCBP3Q53F19 620 aaKnown RBP26.36■■□□□ 1.81
LTBR-205ENST00000535739 PODNQ7Z5L7 613 aa26.36■■□□□ 1.81
LTBR-205ENST00000535739 SULF1Q8IWU6 871 aa26.36■■□□□ 1.81
LTBR-205ENST00000535739 C2orf69Q8N8R5 385 aa26.36■■□□□ 1.81
LTBR-205ENST00000535739 ABHD8Q96I13 439 aa26.36■■□□□ 1.81
LTBR-205ENST00000535739 GMLQ99445 158 aa26.36■■□□□ 1.81
LTBR-205ENST00000535739 USP17L3A6NCW0 530 aa26.35■■□□□ 1.81
LTBR-205ENST00000535739 USP17L4A6NCW7 530 aa26.35■■□□□ 1.81
LTBR-205ENST00000535739 NOGQ13253 232 aa26.35■■□□□ 1.81
LTBR-205ENST00000535739 SCARF1Q14162 830 aa26.35■■□□□ 1.81
LTBR-205ENST00000535739 GCKRQ14397 625 aa26.35■■□□□ 1.81
LTBR-205ENST00000535739 USP17L1Q7RTZ2 530 aa26.35■■□□□ 1.81
LTBR-205ENST00000535739 MED23Q9ULK4 1368 aa26.34■■□□□ 1.81
LTBR-205ENST00000535739 CA12O43570 354 aa26.34■■□□□ 1.81
LTBR-205ENST00000535739 CCT4P50991 539 aaKnown RBP26.34■■□□□ 1.81
LTBR-205ENST00000535739 FKBP5Q13451 457 aaPredicted RBP26.34■■□□□ 1.81
LTBR-205ENST00000535739 ANGEL2Q5VTE6 544 aaKnown RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms