RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 TPRNQ4KMQ1 711 aa16.46■□□□□ 0.23
NEK4-207ENST00000535191 ZMYM1Q5SVZ6 1142 aa16.46■□□□□ 0.23
NEK4-207ENST00000535191 SHANK3Q9BYB0 1731 aa16.46■□□□□ 0.22
NEK4-207ENST00000535191 PALLDQ8WX93 1383 aa16.46■□□□□ 0.22
NEK4-207ENST00000535191 ZBTB38Q8NAP3 1195 aaPredicted RBP16.45■□□□□ 0.22
NEK4-207ENST00000535191 FBXO3Q9UK99 471 aa16.45■□□□□ 0.22
NEK4-207ENST00000535191 Q6ZUG5 572 aa16.45■□□□□ 0.22
NEK4-207ENST00000535191 CCDC85AQ96PX6 553 aaPredicted RBP16.45■□□□□ 0.22
NEK4-207ENST00000535191 PLA2G12BQ9BX93 195 aa16.45■□□□□ 0.22
NEK4-207ENST00000535191 AKAP2Q9Y2D5 859 aa16.45■□□□□ 0.22
NEK4-207ENST00000535191 RNF113AO15541 343 aaKnown RBP16.44■□□□□ 0.22
NEK4-207ENST00000535191 CSF1RP07333 972 aa16.44■□□□□ 0.22
NEK4-207ENST00000535191 CCDC183Q5T5S1 534 aa16.44■□□□□ 0.22
NEK4-207ENST00000535191 GIGYF2Q6Y7W6 1299 aaKnown RBP16.44■□□□□ 0.22
NEK4-207ENST00000535191 RNF214Q8ND24 703 aa16.44■□□□□ 0.22
NEK4-207ENST00000535191 DSCC1Q9BVC3 393 aa16.44■□□□□ 0.22
NEK4-207ENST00000535191 TAF7LQ5H9L4 462 aa16.44■□□□□ 0.22
NEK4-207ENST00000535191 CCDC158Q5M9N0 1113 aa16.44■□□□□ 0.22
NEK4-207ENST00000535191 GORABQ5T7V8 394 aa16.44■□□□□ 0.22
NEK4-207ENST00000535191 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.44■□□□□ 0.22
NEK4-207ENST00000535191 PDLIM2Q96JY6 352 aa16.44■□□□□ 0.22
NEK4-207ENST00000535191 MAP3K15Q6ZN16 1313 aa16.44■□□□□ 0.22
NEK4-207ENST00000535191 NUP188Q5SRE5 1749 aa16.43■□□□□ 0.22
NEK4-207ENST00000535191 IFIT5Q13325 482 aaKnown RBP16.43■□□□□ 0.22
NEK4-207ENST00000535191 HLFQ16534 295 aa16.43■□□□□ 0.22
NEK4-207ENST00000535191 LETM1O95202 739 aaPredicted RBP16.43■□□□□ 0.22
NEK4-207ENST00000535191 FKBP4Q02790 459 aaKnown RBP eCLIP16.43■□□□□ 0.22
NEK4-207ENST00000535191 HMGB1P09429 215 aaKnown RBP16.42■□□□□ 0.22
NEK4-207ENST00000535191 CDC37L1Q7L3B6 337 aa16.42■□□□□ 0.22
NEK4-207ENST00000535191 FERMT3Q86UX7 667 aa16.42■□□□□ 0.22
NEK4-207ENST00000535191 SYNE4Q8N205 404 aa16.42■□□□□ 0.22
NEK4-207ENST00000535191 XAGE2Q96GT9 111 aa16.42■□□□□ 0.22
NEK4-207ENST00000535191 EXOC5O00471 708 aa16.42■□□□□ 0.22
NEK4-207ENST00000535191 HSPD1P10809 573 aaKnown RBP16.42■□□□□ 0.22
NEK4-207ENST00000535191 CYP19A1P11511 503 aaPredicted RBP16.42■□□□□ 0.22
NEK4-207ENST00000535191 ADORA1P30542 326 aa16.42■□□□□ 0.22
NEK4-207ENST00000535191 TTC39AQ5SRH9 613 aa16.42■□□□□ 0.22
NEK4-207ENST00000535191 STOX1Q6ZVD7 989 aa16.42■□□□□ 0.22
NEK4-207ENST00000535191 GTF3C6Q969F1 213 aa16.42■□□□□ 0.22
NEK4-207ENST00000535191 HSP90B1P14625 803 aaKnown RBP16.41■□□□□ 0.22
NEK4-207ENST00000535191 GPTP24298 496 aa16.41■□□□□ 0.22
NEK4-207ENST00000535191 FGD1P98174 961 aa16.41■□□□□ 0.22
NEK4-207ENST00000535191 DHX32Q7L7V1 743 aaKnown RBP16.41■□□□□ 0.22
NEK4-207ENST00000535191 NLRP10Q86W26 655 aa16.41■□□□□ 0.22
NEK4-207ENST00000535191 SLC4A9Q96Q91 983 aa16.41■□□□□ 0.22
NEK4-207ENST00000535191 BRF1Q92994 677 aa16.41■□□□□ 0.22
NEK4-207ENST00000535191 LRRC2Q9BYS8 371 aa16.41■□□□□ 0.22
NEK4-207ENST00000535191 TJP1Q07157 1748 aa16.41■□□□□ 0.22
NEK4-207ENST00000535191 KRT85P78386 507 aa16.4■□□□□ 0.22
NEK4-207ENST00000535191 LRRFIP1Q32MZ4 808 aaKnown RBP16.4■□□□□ 0.22
NEK4-207ENST00000535191 HS1BP3Q53T59 392 aa16.4■□□□□ 0.22
NEK4-207ENST00000535191 HSP90AB3PQ58FF7 597 aa16.4■□□□□ 0.22
NEK4-207ENST00000535191 ZSCAN30Q86W11 494 aa16.4■□□□□ 0.22
NEK4-207ENST00000535191 TOGARAM1Q9Y4F4 1720 aa16.4■□□□□ 0.22
NEK4-207ENST00000535191 MAST3O60307 1309 aa16.4■□□□□ 0.22
NEK4-207ENST00000535191 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
NEK4-207ENST00000535191 JAK2O60674 1132 aa16.39■□□□□ 0.21
NEK4-207ENST00000535191 FAM173BQ6P4H8 233 aa16.39■□□□□ 0.21
NEK4-207ENST00000535191 TTLL11Q8NHH1 800 aa16.39■□□□□ 0.21
NEK4-207ENST00000535191 OSBP2Q969R2 916 aa16.39■□□□□ 0.21
NEK4-207ENST00000535191 CDHR2Q9BYE9 1310 aa16.39■□□□□ 0.21
NEK4-207ENST00000535191 M0R2C6 588 aa16.39■□□□□ 0.21
NEK4-207ENST00000535191 EXOSC10Q01780 885 aaKnown RBP16.39■□□□□ 0.21
NEK4-207ENST00000535191 LDHAL6AQ6ZMR3 332 aa16.39■□□□□ 0.21
NEK4-207ENST00000535191 RIPOR2Q9Y4F9 1068 aa16.39■□□□□ 0.21
NEK4-207ENST00000535191 BCL9O00512 1426 aa16.39■□□□□ 0.21
NEK4-207ENST00000535191 TCHHQ07283 1943 aa16.38■□□□□ 0.21
NEK4-207ENST00000535191 E7EWF7 191 aa16.38■□□□□ 0.21
NEK4-207ENST00000535191 ITGA6P23229 1130 aa16.38■□□□□ 0.21
NEK4-207ENST00000535191 A0A0G2JLW4 131 aa16.38■□□□□ 0.21
NEK4-207ENST00000535191 METTL24Q5JXM2 366 aa16.38■□□□□ 0.21
NEK4-207ENST00000535191 TTC6Q86TZ1 520 aa16.38■□□□□ 0.21
NEK4-207ENST00000535191 FAM184AQ8NB25 1140 aa16.38■□□□□ 0.21
NEK4-207ENST00000535191 GREM2Q9H772 168 aa16.38■□□□□ 0.21
NEK4-207ENST00000535191 TRMT112Q9UI30 125 aaKnown RBP16.38■□□□□ 0.21
NEK4-207ENST00000535191 ZBTB1Q9Y2K1 713 aa16.38■□□□□ 0.21
NEK4-207ENST00000535191 DISP2A7MBM2 1401 aa16.37■□□□□ 0.21
NEK4-207ENST00000535191 IRS4O14654 1257 aaPredicted RBP16.37■□□□□ 0.21
NEK4-207ENST00000535191 PFKFB2O60825 505 aa16.37■□□□□ 0.21
NEK4-207ENST00000535191 ZFYP08048 801 aaPredicted RBP16.37■□□□□ 0.21
NEK4-207ENST00000535191 SCRN1Q12765 414 aa16.37■□□□□ 0.21
NEK4-207ENST00000535191 SCARF1Q14162 830 aa16.37■□□□□ 0.21
NEK4-207ENST00000535191 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
NEK4-207ENST00000535191 TFIP11Q9UBB9 837 aaKnown RBP16.37■□□□□ 0.21
NEK4-207ENST00000535191 COL14A1Q05707 1796 aaKnown RBP16.37■□□□□ 0.21
NEK4-207ENST00000535191 ANKRD18BA2A2Z9 1011 aa16.37■□□□□ 0.21
NEK4-207ENST00000535191 ZAP70P43403 619 aa16.37■□□□□ 0.21
NEK4-207ENST00000535191 ATP2B3Q16720 1220 aa16.37■□□□□ 0.21
NEK4-207ENST00000535191 UVSSAQ2YD98 709 aa16.37■□□□□ 0.21
NEK4-207ENST00000535191 DDX11Q96FC9 970 aa16.37■□□□□ 0.21
NEK4-207ENST00000535191 LLPHQ9BRT6 129 aaKnown RBP16.37■□□□□ 0.21
NEK4-207ENST00000535191 CTSWP56202 376 aa16.36■□□□□ 0.21
NEK4-207ENST00000535191 APOBRQ0VD83 1088 aa16.36■□□□□ 0.21
NEK4-207ENST00000535191 TTLL5Q6EMB2 1281 aa16.36■□□□□ 0.21
NEK4-207ENST00000535191 SCAND2PQ9GZW5 306 aaPredicted RBP16.36■□□□□ 0.21
NEK4-207ENST00000535191 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.36■□□□□ 0.21
NEK4-207ENST00000535191 TBC1D2BQ9UPU7 963 aa16.36■□□□□ 0.21
NEK4-207ENST00000535191 ELP1O95163 1332 aa16.36■□□□□ 0.21
NEK4-207ENST00000535191 MSNP26038 577 aaKnown RBP16.36■□□□□ 0.21
NEK4-207ENST00000535191 GIMAP6Q6P9H5 292 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms