RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 NCBP3Q53F19 620 aaKnown RBP13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 HABP4Q5JVS0 413 aaKnown RBP13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 MPNDQ8N594 471 aa13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 RTFDC1Q9BY42 306 aaPredicted RBP13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 TRMT112Q9UI30 125 aaKnown RBP13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 SH3TC1Q8TE82 1336 aa13.05□□□□□ -0.32
CLSTN3-203ENST00000534830 BBOX1O75936 387 aa13.04□□□□□ -0.32
CLSTN3-203ENST00000534830 SLC10A3P09131 477 aa13.04□□□□□ -0.32
CLSTN3-203ENST00000534830 RBM26Q5T8P6 1007 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-203ENST00000534830 SP8Q8IXZ3 490 aa13.04□□□□□ -0.32
CLSTN3-203ENST00000534830 C8orf58Q8NAV2 365 aa13.04□□□□□ -0.32
CLSTN3-203ENST00000534830 DCPSQ96C86 337 aaKnown RBP13.04□□□□□ -0.32
CLSTN3-203ENST00000534830 LRRC37AA6NMS7 1700 aa13.03□□□□□ -0.32
CLSTN3-203ENST00000534830 ZNF316A6NFI3 1004 aaPredicted RBP13.03□□□□□ -0.32
CLSTN3-203ENST00000534830 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
CLSTN3-203ENST00000534830 PHAXQ9H814 394 aaKnown RBP13.03□□□□□ -0.32
CLSTN3-203ENST00000534830 CACNA1FO60840 1977 aa13.02□□□□□ -0.32
CLSTN3-203ENST00000534830 ATP5J2-PTCD1G3V325 749 aa13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 ELL2O00472 640 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 EGFRP00533 1210 aa13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 GRAPQ13588 217 aa13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 SF3B3Q15393 1217 aaKnown RBP13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 WWC1Q8IX03 1113 aa13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 REM2Q8IYK8 340 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 TSPYL6Q8N831 410 aa13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 GRAPLQ8TC17 118 aaPredicted RBP13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 FAM89AQ96GI7 184 aa13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 COL4A1P02462 1669 aa13.02□□□□□ -0.33
CLSTN3-203ENST00000534830 PSMD14O00487 310 aa13.01□□□□□ -0.33
CLSTN3-203ENST00000534830 TBC1D8O95759 1140 aa13.01□□□□□ -0.33
CLSTN3-203ENST00000534830 DDX46Q7L014 1031 aaKnown RBP13.01□□□□□ -0.33
CLSTN3-203ENST00000534830 SULF1Q8IWU6 871 aa13.01□□□□□ -0.33
CLSTN3-203ENST00000534830 ZNF296Q8WUU4 475 aaPredicted RBP13.01□□□□□ -0.33
CLSTN3-203ENST00000534830 DPF2Q92785 391 aa13.01□□□□□ -0.33
CLSTN3-203ENST00000534830 DUOX1Q9NRD9 1551 aa13□□□□□ -0.33
CLSTN3-203ENST00000534830 CCDC30Q5VVM6 783 aa13□□□□□ -0.33
CLSTN3-203ENST00000534830 TMC4Q7Z404 712 aa13□□□□□ -0.33
CLSTN3-203ENST00000534830 RASAL3Q86YV0 1011 aa13□□□□□ -0.33
CLSTN3-203ENST00000534830 IL16Q14005 1332 aa12.99□□□□□ -0.33
CLSTN3-203ENST00000534830 FBXO46Q6PJ61 603 aaPredicted RBP12.99□□□□□ -0.33
CLSTN3-203ENST00000534830 RIC3Q7Z5B4 369 aa12.99□□□□□ -0.33
CLSTN3-203ENST00000534830 ZBTB38Q8NAP3 1195 aaPredicted RBP12.99□□□□□ -0.33
CLSTN3-203ENST00000534830 ZNF428Q96B54 188 aa12.99□□□□□ -0.33
CLSTN3-203ENST00000534830 CHMP4AQ9BY43 222 aa12.99□□□□□ -0.33
CLSTN3-203ENST00000534830 DBNDD1Q9H9R9 158 aa12.99□□□□□ -0.33
CLSTN3-203ENST00000534830 GGA3Q9NZ52 723 aa12.99□□□□□ -0.33
CLSTN3-203ENST00000534830 IRS4O14654 1257 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-203ENST00000534830 GOLGA2Q08379 1002 aa12.98□□□□□ -0.33
CLSTN3-203ENST00000534830 KIF4BQ2VIQ3 1234 aa12.98□□□□□ -0.33
CLSTN3-203ENST00000534830 CCDC191Q8NCU4 936 aa12.98□□□□□ -0.33
CLSTN3-203ENST00000534830 CELF1Q92879 486 aaKnown RBP12.98□□□□□ -0.33
CLSTN3-203ENST00000534830 TSR2Q969E8 191 aaKnown RBP12.98□□□□□ -0.33
CLSTN3-203ENST00000534830 CDCA5Q96FF9 252 aa12.98□□□□□ -0.33
CLSTN3-203ENST00000534830 METTL22Q9BUU2 404 aaPredicted RBP12.98□□□□□ -0.33
CLSTN3-203ENST00000534830 MKI67P46013 3256 aaKnown RBP12.98□□□□□ -0.33
CLSTN3-203ENST00000534830 RIMBP2O15034 1052 aa12.97□□□□□ -0.33
CLSTN3-203ENST00000534830 ANP32CO43423 234 aa12.97□□□□□ -0.33
CLSTN3-203ENST00000534830 PCCAP05165 728 aaPredicted RBP12.97□□□□□ -0.33
CLSTN3-203ENST00000534830 WASHC4Q2M389 1173 aa12.97□□□□□ -0.33
CLSTN3-203ENST00000534830 MYD88Q99836 296 aa12.97□□□□□ -0.33
CLSTN3-203ENST00000534830 MRS2Q9HD23 443 aa12.97□□□□□ -0.33
CLSTN3-203ENST00000534830 MYH3P11055 1940 aa12.97□□□□□ -0.33
CLSTN3-203ENST00000534830 ASTN2O75129 1339 aaPredicted RBP12.96□□□□□ -0.33
CLSTN3-203ENST00000534830 GPR25O00155 361 aa12.96□□□□□ -0.33
CLSTN3-203ENST00000534830 RPS12P25398 132 aaKnown RBP12.96□□□□□ -0.33
CLSTN3-203ENST00000534830 FXR1P51114 621 aaKnown RBP eCLIP12.96□□□□□ -0.33
CLSTN3-203ENST00000534830 C6orf229H3BNL8 230 aa12.95□□□□□ -0.34
CLSTN3-203ENST00000534830 DDX58O95786 925 aaKnown RBP12.95□□□□□ -0.34
CLSTN3-203ENST00000534830 IGKV5-2P06315 115 aa12.95□□□□□ -0.34
CLSTN3-203ENST00000534830 TWISTNBQ3B726 338 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-203ENST00000534830 RTL5Q5HYW3 569 aaPredicted RBP12.95□□□□□ -0.34
CLSTN3-203ENST00000534830 KSR2Q6VAB6 950 aa12.95□□□□□ -0.34
CLSTN3-203ENST00000534830 WDR63Q8IWG1 891 aa12.95□□□□□ -0.34
CLSTN3-203ENST00000534830 KCNQ5Q9NR82 932 aa12.95□□□□□ -0.34
CLSTN3-203ENST00000534830 NSFL1CQ9UNZ2 370 aaKnown RBP12.95□□□□□ -0.34
CLSTN3-203ENST00000534830 PI4KAP2A4QPH2 592 aa12.94□□□□□ -0.34
CLSTN3-203ENST00000534830 ECE2O60344 883 aa12.94□□□□□ -0.34
CLSTN3-203ENST00000534830 PDE8AO60658 829 aa12.94□□□□□ -0.34
CLSTN3-203ENST00000534830 RPS8P62241 208 aaKnown RBP12.94□□□□□ -0.34
CLSTN3-203ENST00000534830 DOK7Q18PE1 504 aa12.94□□□□□ -0.34
CLSTN3-203ENST00000534830 G2E3Q7L622 706 aa12.94□□□□□ -0.34
CLSTN3-203ENST00000534830 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
CLSTN3-203ENST00000534830 CWC25Q9NXE8 425 aaPredicted RBP12.94□□□□□ -0.34
CLSTN3-203ENST00000534830 POLLQ9UGP5 575 aa12.94□□□□□ -0.34
CLSTN3-203ENST00000534830 MAP3K2Q9Y2U5 619 aa12.94□□□□□ -0.34
CLSTN3-203ENST00000534830 POTEFA5A3E0 1075 aa12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 UBE2Q2LH0YL09 131 aa12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 FKTNO75072 461 aa12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 VAMP4O75379 141 aa12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 HSP90B1P14625 803 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 FKBP1BP68106 108 aa12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 GPSM2P81274 684 aa12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 MKRN3Q13064 507 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 ANGEL2Q5VTE6 544 aaKnown RBP12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 MOB2Q70IA6 237 aa12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 PODXL2Q9NZ53 605 aa12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 PAPPA2Q9BXP8 1791 aa12.93□□□□□ -0.34
CLSTN3-203ENST00000534830 RTL9Q8NET4 1388 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms