RNA–Protein interactions for RNA: ENST00000534788.1

UPK2-202, Transcript of uroplakin 2, humanhuman

TSL 3

Gene UPK2, Length 958 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2-202ENST00000534788 POLLQ9UGP5 575 aa17.43■□□□□ 0.38
UPK2-202ENST00000534788 NSFL1CQ9UNZ2 370 aaKnown RBP17.43■□□□□ 0.38
UPK2-202ENST00000534788 ECE2O60344 883 aa17.42■□□□□ 0.38
UPK2-202ENST00000534788 CALD1Q05682 793 aaKnown RBP17.42■□□□□ 0.38
UPK2-202ENST00000534788 RBM26Q5T8P6 1007 aaKnown RBP17.42■□□□□ 0.38
UPK2-202ENST00000534788 MRS2Q9HD23 443 aa17.42■□□□□ 0.38
UPK2-202ENST00000534788 GPSM2P81274 684 aa17.41■□□□□ 0.38
UPK2-202ENST00000534788 KIF4BQ2VIQ3 1234 aa17.41■□□□□ 0.38
UPK2-202ENST00000534788 NCBP3Q53F19 620 aaKnown RBP17.41■□□□□ 0.38
UPK2-202ENST00000534788 CCDC146Q8IYE0 955 aa17.41■□□□□ 0.38
UPK2-202ENST00000534788 CSRNP1Q96S65 589 aa17.41■□□□□ 0.38
UPK2-202ENST00000534788 ASTN2O75129 1339 aaPredicted RBP17.41■□□□□ 0.38
UPK2-202ENST00000534788 C6orf229H3BNL8 230 aa17.4■□□□□ 0.38
UPK2-202ENST00000534788 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
UPK2-202ENST00000534788 DOK7Q18PE1 504 aa17.4■□□□□ 0.38
UPK2-202ENST00000534788 GGA3Q9NZ52 723 aa17.4■□□□□ 0.38
UPK2-202ENST00000534788 PAPPA2Q9BXP8 1791 aa17.4■□□□□ 0.38
UPK2-202ENST00000534788 CTU1Q7Z7A3 348 aaKnown RBP17.39■□□□□ 0.37
UPK2-202ENST00000534788 CDCA5Q96FF9 252 aa17.39■□□□□ 0.37
UPK2-202ENST00000534788 FAM89AQ96GI7 184 aa17.39■□□□□ 0.37
UPK2-202ENST00000534788 PDE4DIPQ5VU43 2346 aa17.39■□□□□ 0.37
UPK2-202ENST00000534788 KRT24Q2M2I5 525 aa17.38■□□□□ 0.37
UPK2-202ENST00000534788 RASAL3Q86YV0 1011 aa17.38■□□□□ 0.37
UPK2-202ENST00000534788 SULF1Q8IWU6 871 aa17.38■□□□□ 0.37
UPK2-202ENST00000534788 TBC1D16Q8TBP0 767 aa17.38■□□□□ 0.37
UPK2-202ENST00000534788 EYA3Q99504 573 aa17.38■□□□□ 0.37
UPK2-202ENST00000534788 ISCA1Q9BUE6 129 aa17.38■□□□□ 0.37
UPK2-202ENST00000534788 ZNF609O15014 1411 aa17.38■□□□□ 0.37
UPK2-202ENST00000534788 VIL1P09327 827 aaKnown RBP17.37■□□□□ 0.37
UPK2-202ENST00000534788 NEUROD2Q15784 382 aa17.37■□□□□ 0.37
UPK2-202ENST00000534788 PRPF38BQ5VTL8 546 aaKnown RBP17.37■□□□□ 0.37
UPK2-202ENST00000534788 PLBD2Q8NHP8 589 aa17.37■□□□□ 0.37
UPK2-202ENST00000534788 CHPF2Q9P2E5 772 aa17.37■□□□□ 0.37
UPK2-202ENST00000534788 ZNF646O15015 1829 aaPredicted RBP17.36■□□□□ 0.37
UPK2-202ENST00000534788 TRIM35Q9UPQ4 493 aa17.36■□□□□ 0.37
UPK2-202ENST00000534788 ATP5J2-PTCD1G3V325 749 aa17.35■□□□□ 0.37
UPK2-202ENST00000534788 APAF1O14727 1248 aa17.35■□□□□ 0.37
UPK2-202ENST00000534788 REM2Q8IYK8 340 aaPredicted RBP17.35■□□□□ 0.37
UPK2-202ENST00000534788 HPS5Q9UPZ3 1129 aa17.35■□□□□ 0.37
UPK2-202ENST00000534788 ZNF280AP59817 542 aaPredicted RBP17.34■□□□□ 0.37
UPK2-202ENST00000534788 RPS8P62241 208 aaKnown RBP17.34■□□□□ 0.37
UPK2-202ENST00000534788 CCDC27Q2M243 656 aa17.34■□□□□ 0.37
UPK2-202ENST00000534788 RTL5Q5HYW3 569 aaPredicted RBP17.34■□□□□ 0.37
UPK2-202ENST00000534788 ANGEL2Q5VTE6 544 aaKnown RBP17.34■□□□□ 0.37
UPK2-202ENST00000534788 ZC3H12CQ9C0D7 883 aaKnown RBP17.34■□□□□ 0.37
UPK2-202ENST00000534788 PODXL2Q9NZ53 605 aa17.34■□□□□ 0.37
UPK2-202ENST00000534788 CHL1O00533 1208 aa17.33■□□□□ 0.36
UPK2-202ENST00000534788 SCARF1Q14162 830 aa17.33■□□□□ 0.36
UPK2-202ENST00000534788 ANKRD13DQ6ZTN6 518 aa17.33■□□□□ 0.36
UPK2-202ENST00000534788 CHMP4AQ9BY43 222 aa17.33■□□□□ 0.36
UPK2-202ENST00000534788 IRS4O14654 1257 aaPredicted RBP17.32■□□□□ 0.36
UPK2-202ENST00000534788 FKBP1BP68106 108 aa17.32■□□□□ 0.36
UPK2-202ENST00000534788 CCDC184Q52MB2 194 aa17.32■□□□□ 0.36
UPK2-202ENST00000534788 AGBL3Q8NEM8 1001 aa17.32■□□□□ 0.36
UPK2-202ENST00000534788 UFL1O94874 794 aa17.31■□□□□ 0.36
UPK2-202ENST00000534788 HOXB7P09629 217 aa17.31■□□□□ 0.36
UPK2-202ENST00000534788 GNAI1P63096 354 aa17.31■□□□□ 0.36
UPK2-202ENST00000534788 HDGFL1Q5TGJ6 251 aa17.31■□□□□ 0.36
UPK2-202ENST00000534788 RSBN1LQ6PCB5 846 aaPredicted RBP17.31■□□□□ 0.36
UPK2-202ENST00000534788 MOB2Q70IA6 237 aa17.31■□□□□ 0.36
UPK2-202ENST00000534788 SEC31BQ9NQW1 1179 aa17.31■□□□□ 0.36
UPK2-202ENST00000534788 IFT57Q9NWB7 429 aa17.31■□□□□ 0.36
UPK2-202ENST00000534788 SPEF2Q9C093 1822 aa17.31■□□□□ 0.36
UPK2-202ENST00000534788 PITPNM2Q9BZ72 1349 aa17.3■□□□□ 0.36
UPK2-202ENST00000534788 TBC1D8O95759 1140 aa17.3■□□□□ 0.36
UPK2-202ENST00000534788 PKN2Q16513 984 aaKnown RBP17.3■□□□□ 0.36
UPK2-202ENST00000534788 ZNF296Q8WUU4 475 aaPredicted RBP17.3■□□□□ 0.36
UPK2-202ENST00000534788 GMLQ99445 158 aa17.3■□□□□ 0.36
UPK2-202ENST00000534788 MYOZ2Q9NPC6 264 aa17.3■□□□□ 0.36
UPK2-202ENST00000534788 DBF4Q9UBU7 674 aaPredicted RBP17.3■□□□□ 0.36
UPK2-202ENST00000534788 GGA1Q9UJY5 639 aa17.3■□□□□ 0.36
UPK2-202ENST00000534788 SCAF8Q9UPN6 1271 aaKnown RBP17.3■□□□□ 0.36
UPK2-202ENST00000534788 G3V3G9 751 aa17.29■□□□□ 0.36
UPK2-202ENST00000534788 TRIM28Q13263 835 aaKnown RBP17.29■□□□□ 0.36
UPK2-202ENST00000534788 DCAF8Q5TAQ9 597 aa17.29■□□□□ 0.36
UPK2-202ENST00000534788 ANKIB1Q9P2G1 1089 aa17.29■□□□□ 0.36
UPK2-202ENST00000534788 HDAC9Q9UKV0 1011 aa17.29■□□□□ 0.36
UPK2-202ENST00000534788 LAS1LQ9Y4W2 734 aaKnown RBP17.28■□□□□ 0.36
UPK2-202ENST00000534788 UBE2Q2LH0YL09 131 aa17.27■□□□□ 0.36
UPK2-202ENST00000534788 CCER2I3L3R5 266 aa17.27■□□□□ 0.36
UPK2-202ENST00000534788 USP17L8P0C7I0 530 aa17.27■□□□□ 0.36
UPK2-202ENST00000534788 ZNF853P0CG23 659 aa17.27■□□□□ 0.36
UPK2-202ENST00000534788 ZBTB38Q8NAP3 1195 aaPredicted RBP17.27■□□□□ 0.36
UPK2-202ENST00000534788 IL16Q14005 1332 aa17.26■□□□□ 0.35
UPK2-202ENST00000534788 LAMB1P07942 1786 aa17.26■□□□□ 0.35
UPK2-202ENST00000534788 NOM1Q5C9Z4 860 aaKnown RBP17.26■□□□□ 0.35
UPK2-202ENST00000534788 PRAMEF18Q5VWM3 479 aa17.26■□□□□ 0.35
UPK2-202ENST00000534788 HYPKQ9NX55 129 aa17.26■□□□□ 0.35
UPK2-202ENST00000534788 MYH3P11055 1940 aa17.25■□□□□ 0.35
UPK2-202ENST00000534788 GPR25O00155 361 aa17.25■□□□□ 0.35
UPK2-202ENST00000534788 TM4SF4P48230 202 aa17.25■□□□□ 0.35
UPK2-202ENST00000534788 XDHP47989 1333 aa17.24■□□□□ 0.35
UPK2-202ENST00000534788 USP17L3A6NCW0 530 aa17.24■□□□□ 0.35
UPK2-202ENST00000534788 USP17L4A6NCW7 530 aa17.24■□□□□ 0.35
UPK2-202ENST00000534788 NBPF9Q3BBW0 867 aa17.24■□□□□ 0.35
UPK2-202ENST00000534788 FBXO46Q6PJ61 603 aaPredicted RBP17.24■□□□□ 0.35
UPK2-202ENST00000534788 USP17L1Q7RTZ2 530 aa17.24■□□□□ 0.35
UPK2-202ENST00000534788 PODNQ7Z5L7 613 aa17.24■□□□□ 0.35
UPK2-202ENST00000534788 WDR63Q8IWG1 891 aa17.24■□□□□ 0.35
UPK2-202ENST00000534788 WWC1Q8IX03 1113 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms