RNA–Protein interactions for RNA: ENST00000534633.5

USF1-211, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 610 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-211ENST00000534633 CCDC191Q8NCU4 936 aa16.2■□□□□ 0.18
USF1-211ENST00000534633 CHMP4AQ9BY43 222 aa16.2■□□□□ 0.18
USF1-211ENST00000534633 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
USF1-211ENST00000534633 ECE2O60344 883 aa16.19■□□□□ 0.18
USF1-211ENST00000534633 TBC1D16Q8TBP0 767 aa16.19■□□□□ 0.18
USF1-211ENST00000534633 MYD88Q99836 296 aa16.19■□□□□ 0.18
USF1-211ENST00000534633 PODXL2Q9NZ53 605 aa16.19■□□□□ 0.18
USF1-211ENST00000534633 SPEF2Q9C093 1822 aa16.19■□□□□ 0.18
USF1-211ENST00000534633 RTL9Q8NET4 1388 aa16.18■□□□□ 0.18
USF1-211ENST00000534633 ELL2O00472 640 aaPredicted RBP16.18■□□□□ 0.18
USF1-211ENST00000534633 AOC2O75106 756 aa16.18■□□□□ 0.18
USF1-211ENST00000534633 PCCAP05165 728 aaPredicted RBP16.18■□□□□ 0.18
USF1-211ENST00000534633 CCDC152Q4G0S7 254 aa16.18■□□□□ 0.18
USF1-211ENST00000534633 SAMD7Q7Z3H4 446 aa16.18■□□□□ 0.18
USF1-211ENST00000534633 ZNF408Q9H9D4 720 aa16.18■□□□□ 0.18
USF1-211ENST00000534633 CACNA1FO60840 1977 aa16.17■□□□□ 0.18
USF1-211ENST00000534633 CASP8AP2Q9UKL3 1982 aa16.17■□□□□ 0.18
USF1-211ENST00000534633 CA12O43570 354 aa16.17■□□□□ 0.18
USF1-211ENST00000534633 PDE8AO60658 829 aa16.17■□□□□ 0.18
USF1-211ENST00000534633 DDX58O95786 925 aaKnown RBP16.17■□□□□ 0.18
USF1-211ENST00000534633 DOK7Q18PE1 504 aa16.17■□□□□ 0.18
USF1-211ENST00000534633 C8orf58Q8NAV2 365 aa16.17■□□□□ 0.18
USF1-211ENST00000534633 ZC3H12CQ9C0D7 883 aaKnown RBP16.17■□□□□ 0.18
USF1-211ENST00000534633 SEC31BQ9NQW1 1179 aa16.17■□□□□ 0.18
USF1-211ENST00000534633 CWC25Q9NXE8 425 aaPredicted RBP16.17■□□□□ 0.18
USF1-211ENST00000534633 CCER2I3L3R5 266 aa16.16■□□□□ 0.18
USF1-211ENST00000534633 BRPF1P55201 1214 aaPredicted RBP16.16■□□□□ 0.18
USF1-211ENST00000534633 TBC1D10BQ4KMP7 808 aaPredicted RBP16.16■□□□□ 0.18
USF1-211ENST00000534633 CCDC30Q5VVM6 783 aa16.16■□□□□ 0.18
USF1-211ENST00000534633 USP48Q86UV5 1035 aa16.16■□□□□ 0.18
USF1-211ENST00000534633 ABHD8Q96I13 439 aa16.16■□□□□ 0.18
USF1-211ENST00000534633 METTL22Q9BUU2 404 aaPredicted RBP16.16■□□□□ 0.18
USF1-211ENST00000534633 KCNQ5Q9NR82 932 aa16.16■□□□□ 0.18
USF1-211ENST00000534633 ANKIB1Q9P2G1 1089 aa16.16■□□□□ 0.18
USF1-211ENST00000534633 ZNF609O15014 1411 aa16.16■□□□□ 0.18
USF1-211ENST00000534633 UFL1O94874 794 aa16.15■□□□□ 0.18
USF1-211ENST00000534633 EGFRP00533 1210 aa16.15■□□□□ 0.18
USF1-211ENST00000534633 FAM9BQ8IZU0 186 aa16.15■□□□□ 0.18
USF1-211ENST00000534633 GGA1Q9UJY5 639 aa16.15■□□□□ 0.18
USF1-211ENST00000534633 AKAP11Q9UKA4 1901 aa16.15■□□□□ 0.18
USF1-211ENST00000534633 G3V3G9 751 aa16.14■□□□□ 0.17
USF1-211ENST00000534633 VIL1P09327 827 aaKnown RBP16.14■□□□□ 0.17
USF1-211ENST00000534633 HUNKP57058 714 aa16.14■□□□□ 0.17
USF1-211ENST00000534633 NOGQ13253 232 aa16.14■□□□□ 0.17
USF1-211ENST00000534633 DCAF8Q5TAQ9 597 aa16.14■□□□□ 0.17
USF1-211ENST00000534633 KRT26Q7Z3Y9 468 aa16.14■□□□□ 0.17
USF1-211ENST00000534633 DCPSQ96C86 337 aaKnown RBP16.14■□□□□ 0.17
USF1-211ENST00000534633 ZNF646O15015 1829 aaPredicted RBP16.13■□□□□ 0.17
USF1-211ENST00000534633 KIF4BQ2VIQ3 1234 aa16.13■□□□□ 0.17
USF1-211ENST00000534633 ANKRD18AQ8IVF6 992 aa16.13■□□□□ 0.17
USF1-211ENST00000534633 MAP3K2Q9Y2U5 619 aa16.13■□□□□ 0.17
USF1-211ENST00000534633 XDHP47989 1333 aa16.13■□□□□ 0.17
USF1-211ENST00000534633 RBM26Q5T8P6 1007 aaKnown RBP16.12■□□□□ 0.17
USF1-211ENST00000534633 KSR2Q6VAB6 950 aa16.12■□□□□ 0.17
USF1-211ENST00000534633 JARID2Q92833 1246 aaPredicted RBP16.12■□□□□ 0.17
USF1-211ENST00000534633 GBA2Q9HCG7 927 aaPredicted RBP16.12■□□□□ 0.17
USF1-211ENST00000534633 TSKSQ9UJT2 592 aa16.12■□□□□ 0.17
USF1-211ENST00000534633 ADM5C9JUS6 153 aa16.11■□□□□ 0.17
USF1-211ENST00000534633 CTSWP56202 376 aa16.11■□□□□ 0.17
USF1-211ENST00000534633 RSBN1LQ6PCB5 846 aaPredicted RBP16.11■□□□□ 0.17
USF1-211ENST00000534633 DLK2Q6UY11 383 aa16.11■□□□□ 0.17
USF1-211ENST00000534633 TSPYL6Q8N831 410 aa16.11■□□□□ 0.17
USF1-211ENST00000534633 C2orf69Q8N8R5 385 aa16.11■□□□□ 0.17
USF1-211ENST00000534633 AGBL3Q8NEM8 1001 aa16.11■□□□□ 0.17
USF1-211ENST00000534633 CCDC85AQ96PX6 553 aaPredicted RBP16.11■□□□□ 0.17
USF1-211ENST00000534633 CDC5LQ99459 802 aaKnown RBP16.11■□□□□ 0.17
USF1-211ENST00000534633 PI4KAP2A4QPH2 592 aa16.1■□□□□ 0.17
USF1-211ENST00000534633 IGKV5-2P06315 115 aa16.1■□□□□ 0.17
USF1-211ENST00000534633 ATP2B4P23634 1241 aa16.1■□□□□ 0.17
USF1-211ENST00000534633 ZNF280AP59817 542 aaPredicted RBP16.1■□□□□ 0.17
USF1-211ENST00000534633 NEXNQ0ZGT2 675 aa16.1■□□□□ 0.17
USF1-211ENST00000534633 CCDC27Q2M243 656 aa16.1■□□□□ 0.17
USF1-211ENST00000534633 RGMBQ6NW40 437 aa16.1■□□□□ 0.17
USF1-211ENST00000534633 SULF1Q8IWU6 871 aa16.1■□□□□ 0.17
USF1-211ENST00000534633 PI4KAP1Q8N8J0 262 aa16.1■□□□□ 0.17
USF1-211ENST00000534633 STK31Q9BXU1 1019 aa16.1■□□□□ 0.17
USF1-211ENST00000534633 GGA3Q9NZ52 723 aa16.1■□□□□ 0.17
USF1-211ENST00000534633 FAM155AB1AL88 458 aaPredicted RBP16.09■□□□□ 0.17
USF1-211ENST00000534633 PODNQ7Z5L7 613 aa16.09■□□□□ 0.17
USF1-211ENST00000534633 CCDC102AQ96A19 550 aa16.09■□□□□ 0.17
USF1-211ENST00000534633 TTLL11Q8NHH1 800 aa16.08■□□□□ 0.16
USF1-211ENST00000534633 TSR2Q969E8 191 aaKnown RBP16.08■□□□□ 0.16
USF1-211ENST00000534633 ZIC5Q96T25 663 aa16.08■□□□□ 0.16
USF1-211ENST00000534633 GMLQ99445 158 aa16.08■□□□□ 0.16
USF1-211ENST00000534633 BSDC1Q9NW68 430 aaPredicted RBP16.08■□□□□ 0.16
USF1-211ENST00000534633 MED23Q9ULK4 1368 aa16.08■□□□□ 0.16
USF1-211ENST00000534633 PAPPA2Q9BXP8 1791 aa16.08■□□□□ 0.16
USF1-211ENST00000534633 USP17L3A6NCW0 530 aa16.07■□□□□ 0.16
USF1-211ENST00000534633 USP17L4A6NCW7 530 aa16.07■□□□□ 0.16
USF1-211ENST00000534633 NEURL1BA8MQ27 555 aa16.07■□□□□ 0.16
USF1-211ENST00000534633 TWISTNBQ3B726 338 aaPredicted RBP16.07■□□□□ 0.16
USF1-211ENST00000534633 USP17L1Q7RTZ2 530 aa16.07■□□□□ 0.16
USF1-211ENST00000534633 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
USF1-211ENST00000534633 ASTN2O75129 1339 aaPredicted RBP16.07■□□□□ 0.16
USF1-211ENST00000534633 IL16Q14005 1332 aa16.06■□□□□ 0.16
USF1-211ENST00000534633 PITPNM2Q9BZ72 1349 aa16.06■□□□□ 0.16
USF1-211ENST00000534633 USP17L8P0C7I0 530 aa16.06■□□□□ 0.16
USF1-211ENST00000534633 ZNF157P51786 506 aaPredicted RBP16.06■□□□□ 0.16
USF1-211ENST00000534633 SCARF1Q14162 830 aa16.06■□□□□ 0.16
USF1-211ENST00000534633 CWF19L2Q2TBE0 894 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms