RNA–Protein interactions for RNA: ENST00000534590.5

PSMD13-214, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 5

Gene PSMD13, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-214ENST00000534590 RGMBQ6NW40 437 aa12.71□□□□□ -0.37
PSMD13-214ENST00000534590 DPF2Q92785 391 aa12.71□□□□□ -0.37
PSMD13-214ENST00000534590 SEC31BQ9NQW1 1179 aa12.71□□□□□ -0.37
PSMD13-214ENST00000534590 TRIM35Q9UPQ4 493 aa12.71□□□□□ -0.37
PSMD13-214ENST00000534590 DUOX1Q9NRD9 1551 aa12.71□□□□□ -0.37
PSMD13-214ENST00000534590 ELL2O00472 640 aaPredicted RBP12.7□□□□□ -0.38
PSMD13-214ENST00000534590 TRPA1O75762 1119 aa12.7□□□□□ -0.38
PSMD13-214ENST00000534590 RPS8P62241 208 aaKnown RBP12.7□□□□□ -0.38
PSMD13-214ENST00000534590 SF3B3Q15393 1217 aaKnown RBP12.7□□□□□ -0.38
PSMD13-214ENST00000534590 DUSP27Q5VZP5 1158 aa12.7□□□□□ -0.38
PSMD13-214ENST00000534590 TBC1D16Q8TBP0 767 aa12.7□□□□□ -0.38
PSMD13-214ENST00000534590 EYA3Q99504 573 aa12.7□□□□□ -0.38
PSMD13-214ENST00000534590 ZC3H12CQ9C0D7 883 aaKnown RBP12.7□□□□□ -0.38
PSMD13-214ENST00000534590 ANKIB1Q9P2G1 1089 aa12.7□□□□□ -0.38
PSMD13-214ENST00000534590 DBF4Q9UBU7 674 aaPredicted RBP12.7□□□□□ -0.38
PSMD13-214ENST00000534590 SCAF8Q9UPN6 1271 aaKnown RBP12.7□□□□□ -0.38
PSMD13-214ENST00000534590 COL4A1P02462 1669 aa12.7□□□□□ -0.38
PSMD13-214ENST00000534590 RTL9Q8NET4 1388 aa12.69□□□□□ -0.38
PSMD13-214ENST00000534590 FAM155AB1AL88 458 aaPredicted RBP12.69□□□□□ -0.38
PSMD13-214ENST00000534590 UFL1O94874 794 aa12.69□□□□□ -0.38
PSMD13-214ENST00000534590 RGS19P49795 217 aa12.69□□□□□ -0.38
PSMD13-214ENST00000534590 WDR43Q15061 677 aaKnown RBP eCLIP12.69□□□□□ -0.38
PSMD13-214ENST00000534590 RALBP1Q15311 655 aa12.69□□□□□ -0.38
PSMD13-214ENST00000534590 KIF4BQ2VIQ3 1234 aa12.69□□□□□ -0.38
PSMD13-214ENST00000534590 RIC3Q7Z5B4 369 aa12.69□□□□□ -0.38
PSMD13-214ENST00000534590 RUNDC1Q96C34 613 aa12.69□□□□□ -0.38
PSMD13-214ENST00000534590 PRKRIP1Q9H875 184 aaPredicted RBP12.69□□□□□ -0.38
PSMD13-214ENST00000534590 GGA3Q9NZ52 723 aa12.69□□□□□ -0.38
PSMD13-214ENST00000534590 DDX60Q8IY21 1712 aaKnown RBP12.68□□□□□ -0.38
PSMD13-214ENST00000534590 SLC34A2O95436 690 aa12.68□□□□□ -0.38
PSMD13-214ENST00000534590 SOX10P56693 466 aa12.68□□□□□ -0.38
PSMD13-214ENST00000534590 SULF1Q8IWU6 871 aa12.68□□□□□ -0.38
PSMD13-214ENST00000534590 CCDC102AQ96A19 550 aa12.68□□□□□ -0.38
PSMD13-214ENST00000534590 MYD88Q99836 296 aa12.68□□□□□ -0.38
PSMD13-214ENST00000534590 PHAXQ9H814 394 aaKnown RBP12.68□□□□□ -0.38
PSMD13-214ENST00000534590 HYPKQ9NX55 129 aa12.68□□□□□ -0.38
PSMD13-214ENST00000534590 RPS12P25398 132 aaKnown RBP12.67□□□□□ -0.38
PSMD13-214ENST00000534590 RNF186Q9NXI6 227 aa12.67□□□□□ -0.38
PSMD13-214ENST00000534590 GGA1Q9UJY5 639 aa12.67□□□□□ -0.38
PSMD13-214ENST00000534590 ADAMTS8Q9UP79 889 aa12.67□□□□□ -0.38
PSMD13-214ENST00000534590 VIL1P09327 827 aaKnown RBP12.66□□□□□ -0.38
PSMD13-214ENST00000534590 GOLGA2Q08379 1002 aa12.66□□□□□ -0.38
PSMD13-214ENST00000534590 SCARF1Q14162 830 aa12.66□□□□□ -0.38
PSMD13-214ENST00000534590 ANGEL2Q5VTE6 544 aaKnown RBP12.66□□□□□ -0.38
PSMD13-214ENST00000534590 CDCA5Q96FF9 252 aa12.66□□□□□ -0.38
PSMD13-214ENST00000534590 MBIPQ9NS73 344 aa12.66□□□□□ -0.38
PSMD13-214ENST00000534590 LRRC37AA6NMS7 1700 aa12.65□□□□□ -0.38
PSMD13-214ENST00000534590 WTIPA6NIX2 430 aaPredicted RBP12.65□□□□□ -0.38
PSMD13-214ENST00000534590 PRAMEF18Q5VWM3 479 aa12.65□□□□□ -0.38
PSMD13-214ENST00000534590 MOB2Q70IA6 237 aa12.65□□□□□ -0.38
PSMD13-214ENST00000534590 ZBTB38Q8NAP3 1195 aaPredicted RBP12.65□□□□□ -0.38
PSMD13-214ENST00000534590 FBXW7Q969H0 707 aa12.65□□□□□ -0.38
PSMD13-214ENST00000534590 CSRNP1Q96S65 589 aa12.65□□□□□ -0.38
PSMD13-214ENST00000534590 SCN9AQ15858 1988 aa12.65□□□□□ -0.38
PSMD13-214ENST00000534590 MYBBP1AQ9BQG0 1328 aaKnown RBP12.64□□□□□ -0.39
PSMD13-214ENST00000534590 HOXB7P09629 217 aa12.64□□□□□ -0.39
PSMD13-214ENST00000534590 TRIM28Q13263 835 aaKnown RBP12.64□□□□□ -0.39
PSMD13-214ENST00000534590 CCDC152Q4G0S7 254 aa12.64□□□□□ -0.39
PSMD13-214ENST00000534590 RSBN1LQ6PCB5 846 aaPredicted RBP12.64□□□□□ -0.39
PSMD13-214ENST00000534590 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.64□□□□□ -0.39
PSMD13-214ENST00000534590 UBE2Q2LH0YL09 131 aa12.63□□□□□ -0.39
PSMD13-214ENST00000534590 SLC10A3P09131 477 aa12.63□□□□□ -0.39
PSMD13-214ENST00000534590 MKRN3Q13064 507 aaKnown RBP12.63□□□□□ -0.39
PSMD13-214ENST00000534590 TTLL12Q14166 644 aaPredicted RBP12.63□□□□□ -0.39
PSMD13-214ENST00000534590 MXD3Q9BW11 206 aa12.63□□□□□ -0.39
PSMD13-214ENST00000534590 PODXL2Q9NZ53 605 aa12.63□□□□□ -0.39
PSMD13-214ENST00000534590 PDE8AO60658 829 aa12.62□□□□□ -0.39
PSMD13-214ENST00000534590 USP17L8P0C7I0 530 aa12.62□□□□□ -0.39
PSMD13-214ENST00000534590 RASAL3Q86YV0 1011 aa12.62□□□□□ -0.39
PSMD13-214ENST00000534590 ANKRD18AQ8IVF6 992 aa12.62□□□□□ -0.39
PSMD13-214ENST00000534590 MYOZ2Q9NPC6 264 aa12.62□□□□□ -0.39
PSMD13-214ENST00000534590 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
PSMD13-214ENST00000534590 SAGE1Q9NXZ1 904 aa12.62□□□□□ -0.39
PSMD13-214ENST00000534590 AKAP11Q9UKA4 1901 aa12.62□□□□□ -0.39
PSMD13-214ENST00000534590 USP17L3A6NCW0 530 aa12.61□□□□□ -0.39
PSMD13-214ENST00000534590 USP17L4A6NCW7 530 aa12.61□□□□□ -0.39
PSMD13-214ENST00000534590 APAF1O14727 1248 aa12.61□□□□□ -0.39
PSMD13-214ENST00000534590 PCCAP05165 728 aaPredicted RBP12.61□□□□□ -0.39
PSMD13-214ENST00000534590 HSP90B1P14625 803 aaKnown RBP12.61□□□□□ -0.39
PSMD13-214ENST00000534590 ZNF280AP59817 542 aaPredicted RBP12.61□□□□□ -0.39
PSMD13-214ENST00000534590 USP17L1Q7RTZ2 530 aa12.61□□□□□ -0.39
PSMD13-214ENST00000534590 C8orf58Q8NAV2 365 aa12.61□□□□□ -0.39
PSMD13-214ENST00000534590 CCDC191Q8NCU4 936 aa12.61□□□□□ -0.39
PSMD13-214ENST00000534590 AGBL3Q8NEM8 1001 aa12.61□□□□□ -0.39
PSMD13-214ENST00000534590 TBC1D8O95759 1140 aa12.6□□□□□ -0.39
PSMD13-214ENST00000534590 ATP2B4P23634 1241 aa12.6□□□□□ -0.39
PSMD13-214ENST00000534590 PRKG1Q13976 671 aa12.6□□□□□ -0.39
PSMD13-214ENST00000534590 NBPF9Q3BBW0 867 aa12.6□□□□□ -0.39
PSMD13-214ENST00000534590 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
PSMD13-214ENST00000534590 CTU1Q7Z7A3 348 aaKnown RBP12.6□□□□□ -0.39
PSMD13-214ENST00000534590 METTL22Q9BUU2 404 aaPredicted RBP12.6□□□□□ -0.39
PSMD13-214ENST00000534590 MAP3K2Q9Y2U5 619 aa12.6□□□□□ -0.39
PSMD13-214ENST00000534590 XDHP47989 1333 aa12.6□□□□□ -0.39
PSMD13-214ENST00000534590 ZNF853P0CG23 659 aa12.59□□□□□ -0.39
PSMD13-214ENST00000534590 GNAI1P63096 354 aa12.59□□□□□ -0.39
PSMD13-214ENST00000534590 GMLQ99445 158 aa12.59□□□□□ -0.39
PSMD13-214ENST00000534590 HDAC9Q9UKV0 1011 aa12.59□□□□□ -0.39
PSMD13-214ENST00000534590 SASH1O94885 1247 aa12.58□□□□□ -0.4
PSMD13-214ENST00000534590 DDX58O95786 925 aaKnown RBP12.58□□□□□ -0.4
PSMD13-214ENST00000534590 CTSWP56202 376 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms