RNA–Protein interactions for RNA: ENST00000534484.1

LMO1-204, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene LMO1, Length 770 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-204ENST00000534484 PTH1RQ03431 593 aa16.27■□□□□ 0.2
LMO1-204ENST00000534484 SF3B3Q15393 1217 aaKnown RBP16.27■□□□□ 0.2
LMO1-204ENST00000534484 CCDC152Q4G0S7 254 aa16.27■□□□□ 0.2
LMO1-204ENST00000534484 XAGE2Q96GT9 111 aa16.27■□□□□ 0.2
LMO1-204ENST00000534484 TM6SF1Q9BZW5 370 aa16.27■□□□□ 0.2
LMO1-204ENST00000534484 PAG1Q9NWQ8 432 aa16.27■□□□□ 0.2
LMO1-204ENST00000534484 PDE8BO95263 885 aa16.26■□□□□ 0.19
LMO1-204ENST00000534484 IFIT1P09914 478 aaKnown RBP16.26■□□□□ 0.19
LMO1-204ENST00000534484 FGFR2P21802 821 aa16.26■□□□□ 0.19
LMO1-204ENST00000534484 NEK4P51957 841 aa16.26■□□□□ 0.19
LMO1-204ENST00000534484 ATP2B3Q16720 1220 aa16.26■□□□□ 0.19
LMO1-204ENST00000534484 METTL24Q5JXM2 366 aa16.26■□□□□ 0.19
LMO1-204ENST00000534484 CCDC158Q5M9N0 1113 aa16.26■□□□□ 0.19
LMO1-204ENST00000534484 USPL1Q5W0Q7 1092 aa16.26■□□□□ 0.19
LMO1-204ENST00000534484 EDC3Q96F86 508 aaKnown RBP16.26■□□□□ 0.19
LMO1-204ENST00000534484 HCLS1P14317 486 aaPredicted RBP16.25■□□□□ 0.19
LMO1-204ENST00000534484 CUL4AQ13619 759 aa16.25■□□□□ 0.19
LMO1-204ENST00000534484 TSGA10IPQ3SY00 556 aa16.25■□□□□ 0.19
LMO1-204ENST00000534484 FAM182BQ5T319 152 aa16.25■□□□□ 0.19
LMO1-204ENST00000534484 FAM196AQ6ZSG2 479 aa16.25■□□□□ 0.19
LMO1-204ENST00000534484 CCDC85AQ96PX6 553 aaPredicted RBP16.25■□□□□ 0.19
LMO1-204ENST00000534484 CNNM1Q9NRU3 951 aa16.25■□□□□ 0.19
LMO1-204ENST00000534484 HELLSQ9NRZ9 838 aa16.25■□□□□ 0.19
LMO1-204ENST00000534484 RTCBQ9Y3I0 505 aaKnown RBP16.25■□□□□ 0.19
LMO1-204ENST00000534484 TAF5LO75529 589 aa16.24■□□□□ 0.19
LMO1-204ENST00000534484 ADRA2BP18089 450 aa16.24■□□□□ 0.19
LMO1-204ENST00000534484 HMGB2P26583 209 aaKnown RBP16.24■□□□□ 0.19
LMO1-204ENST00000534484 ADORA1P30542 326 aa16.24■□□□□ 0.19
LMO1-204ENST00000534484 NBR1Q14596 966 aa16.24■□□□□ 0.19
LMO1-204ENST00000534484 RASEFQ8IZ41 740 aa16.24■□□□□ 0.19
LMO1-204ENST00000534484 TTC14Q96N46 770 aa16.24■□□□□ 0.19
LMO1-204ENST00000534484 DNAJC2Q99543 621 aaKnown RBP16.24■□□□□ 0.19
LMO1-204ENST00000534484 NYXQ9GZU5 481 aa16.24■□□□□ 0.19
LMO1-204ENST00000534484 CWC22Q9HCG8 908 aaKnown RBP16.24■□□□□ 0.19
LMO1-204ENST00000534484 DOCK2Q92608 1830 aa16.24■□□□□ 0.19
LMO1-204ENST00000534484 SSFA2P28290 1259 aa16.23■□□□□ 0.19
LMO1-204ENST00000534484 KCNQ4P56696 695 aa16.23■□□□□ 0.19
LMO1-204ENST00000534484 LRRFIP1Q32MZ4 808 aaKnown RBP16.23■□□□□ 0.19
LMO1-204ENST00000534484 MCMDC2Q4G0Z9 681 aa16.23■□□□□ 0.19
LMO1-204ENST00000534484 TTC39AQ5SRH9 613 aa16.23■□□□□ 0.19
LMO1-204ENST00000534484 ZMYM1Q5SVZ6 1142 aa16.23■□□□□ 0.19
LMO1-204ENST00000534484 LPIN2Q92539 896 aa16.23■□□□□ 0.19
LMO1-204ENST00000534484 HMG20BQ9P0W2 317 aa16.23■□□□□ 0.19
LMO1-204ENST00000534484 RBM8AQ9Y5S9 174 aaKnown RBP16.23■□□□□ 0.19
LMO1-204ENST00000534484 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
LMO1-204ENST00000534484 GOLIM4O00461 696 aa16.22■□□□□ 0.19
LMO1-204ENST00000534484 GNPATO15228 680 aa16.22■□□□□ 0.19
LMO1-204ENST00000534484 ARID4AP29374 1257 aaPredicted RBP16.22■□□□□ 0.19
LMO1-204ENST00000534484 PUM3Q15397 648 aaKnown RBP16.22■□□□□ 0.19
LMO1-204ENST00000534484 SLC27A3Q5K4L6 730 aa16.22■□□□□ 0.19
LMO1-204ENST00000534484 TBC1D9BQ66K14 1250 aa16.22■□□□□ 0.19
LMO1-204ENST00000534484 DDX46Q7L014 1031 aaKnown RBP16.22■□□□□ 0.19
LMO1-204ENST00000534484 KRT27Q7Z3Y8 459 aa16.22■□□□□ 0.19
LMO1-204ENST00000534484 ZNF589Q86UQ0 364 aaPredicted RBP16.22■□□□□ 0.19
LMO1-204ENST00000534484 SPRYD3Q8NCJ5 442 aa16.22■□□□□ 0.19
LMO1-204ENST00000534484 INTS4Q96HW7 963 aaKnown RBP16.22■□□□□ 0.19
LMO1-204ENST00000534484 ZSWIM6Q9HCJ5 1215 aa16.22■□□□□ 0.19
LMO1-204ENST00000534484 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
LMO1-204ENST00000534484 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
LMO1-204ENST00000534484 ERFEQ4G0M1 354 aa16.21■□□□□ 0.19
LMO1-204ENST00000534484 CREB3L3Q68CJ9 461 aa16.21■□□□□ 0.19
LMO1-204ENST00000534484 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.19
LMO1-204ENST00000534484 TMX3Q96JJ7 454 aa16.21■□□□□ 0.19
LMO1-204ENST00000534484 CDC5LQ99459 802 aaKnown RBP16.21■□□□□ 0.19
LMO1-204ENST00000534484 ALDH8A1Q9H2A2 487 aaPredicted RBP16.21■□□□□ 0.19
LMO1-204ENST00000534484 NDUFB9Q9Y6M9 179 aa16.21■□□□□ 0.19
LMO1-204ENST00000534484 COL4A1P02462 1669 aa16.21■□□□□ 0.18
LMO1-204ENST00000534484 SLC27A2O14975 620 aa16.2■□□□□ 0.18
LMO1-204ENST00000534484 RNF113AO15541 343 aaKnown RBP16.2■□□□□ 0.18
LMO1-204ENST00000534484 ZPR1O75312 459 aa16.2■□□□□ 0.18
LMO1-204ENST00000534484 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
LMO1-204ENST00000534484 IGHMBP2P38935 993 aaKnown RBP16.2■□□□□ 0.18
LMO1-204ENST00000534484 GORABQ5T7V8 394 aa16.2■□□□□ 0.18
LMO1-204ENST00000534484 RNF20Q5VTR2 975 aa16.2■□□□□ 0.18
LMO1-204ENST00000534484 CLEC17AQ6ZS10 378 aa16.2■□□□□ 0.18
LMO1-204ENST00000534484 MPHOSPH8Q99549 860 aa16.2■□□□□ 0.18
LMO1-204ENST00000534484 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
LMO1-204ENST00000534484 SEC31BQ9NQW1 1179 aa16.2■□□□□ 0.18
LMO1-204ENST00000534484 LRRC4BQ9NT99 713 aa16.2■□□□□ 0.18
LMO1-204ENST00000534484 U3KPZ7 1027 aaPredicted RBP16.2■□□□□ 0.18
LMO1-204ENST00000534484 FAM177BA6PVY3 158 aa16.19■□□□□ 0.18
LMO1-204ENST00000534484 ZBTB22O15209 634 aa16.19■□□□□ 0.18
LMO1-204ENST00000534484 FRAT2O75474 233 aaPredicted RBP16.19■□□□□ 0.18
LMO1-204ENST00000534484 HSP90AA1P07900 732 aaKnown RBP16.19■□□□□ 0.18
LMO1-204ENST00000534484 ZKSCAN1P17029 563 aaPredicted RBP16.19■□□□□ 0.18
LMO1-204ENST00000534484 RBM6P78332 1123 aaKnown RBP16.19■□□□□ 0.18
LMO1-204ENST00000534484 VPS53Q5VIR6 699 aa16.19■□□□□ 0.18
LMO1-204ENST00000534484 ZNF772Q68DY9 489 aaPredicted RBP16.19■□□□□ 0.18
LMO1-204ENST00000534484 PRPF40BQ6NWY9 871 aaKnown RBP16.19■□□□□ 0.18
LMO1-204ENST00000534484 AMIGO3Q86WK7 504 aa16.19■□□□□ 0.18
LMO1-204ENST00000534484 SETDB2Q96T68 719 aa16.19■□□□□ 0.18
LMO1-204ENST00000534484 SRP68Q9UHB9 627 aaKnown RBP16.19■□□□□ 0.18
LMO1-204ENST00000534484 MYO5AQ9Y4I1 1855 aaKnown RBP16.18■□□□□ 0.18
LMO1-204ENST00000534484 CYP2E1P05181 493 aaPredicted RBP16.18■□□□□ 0.18
LMO1-204ENST00000534484 SLC5A1P13866 664 aa16.18■□□□□ 0.18
LMO1-204ENST00000534484 PSMA5P28066 241 aa16.18■□□□□ 0.18
LMO1-204ENST00000534484 MCAMP43121 646 aa16.18■□□□□ 0.18
LMO1-204ENST00000534484 SCARF1Q14162 830 aa16.18■□□□□ 0.18
LMO1-204ENST00000534484 TTF1Q15361 905 aaPredicted RBP16.18■□□□□ 0.18
LMO1-204ENST00000534484 TRAPPC3LQ5T215 181 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms