RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 MAP1SQ66K74 1059 aaPredicted RBP29.68■■■□□ 2.34
YIF1A-213ENST00000534374 CASP7P55210 303 aa29.67■■■□□ 2.34
YIF1A-213ENST00000534374 BCL2L13Q9BXK5 485 aa29.67■■■□□ 2.34
YIF1A-213ENST00000534374 BSDC1Q9NW68 430 aaPredicted RBP29.67■■■□□ 2.34
YIF1A-213ENST00000534374 GGA1Q9UJY5 639 aa29.67■■■□□ 2.34
YIF1A-213ENST00000534374 GREM2Q9H772 168 aa29.66■■■□□ 2.34
YIF1A-213ENST00000534374 DBNDD1Q9H9R9 158 aa29.66■■■□□ 2.34
YIF1A-213ENST00000534374 TMEM88BA6NKF7 163 aa29.65■■■□□ 2.34
YIF1A-213ENST00000534374 DPF2Q92785 391 aa29.65■■■□□ 2.34
YIF1A-213ENST00000534374 XDHP47989 1333 aa29.65■■■□□ 2.34
YIF1A-213ENST00000534374 MYH3P11055 1940 aa29.65■■■□□ 2.34
YIF1A-213ENST00000534374 UFL1O94874 794 aa29.64■■■□□ 2.34
YIF1A-213ENST00000534374 CSF1RP07333 972 aa29.64■■■□□ 2.34
YIF1A-213ENST00000534374 BEND3Q5T5X7 828 aa29.64■■■□□ 2.34
YIF1A-213ENST00000534374 ECE2O60344 883 aa29.63■■■□□ 2.33
YIF1A-213ENST00000534374 ATP2B4P23634 1241 aa29.63■■■□□ 2.33
YIF1A-213ENST00000534374 CNOT7Q9UIV1 285 aaKnown RBP29.63■■■□□ 2.33
YIF1A-213ENST00000534374 E9PSI1 815 aa29.62■■■□□ 2.33
YIF1A-213ENST00000534374 F6X3S4 739 aa29.62■■■□□ 2.33
YIF1A-213ENST00000534374 CCER2I3L3R5 266 aa29.62■■■□□ 2.33
YIF1A-213ENST00000534374 DOK7Q18PE1 504 aa29.62■■■□□ 2.33
YIF1A-213ENST00000534374 MINPP1Q9UNW1 487 aa29.62■■■□□ 2.33
YIF1A-213ENST00000534374 H7C1D1 291 aa29.61■■■□□ 2.33
YIF1A-213ENST00000534374 PSMD14O00487 310 aa29.61■■■□□ 2.33
YIF1A-213ENST00000534374 ZC3H15Q8WU90 426 aaKnown RBP29.61■■■□□ 2.33
YIF1A-213ENST00000534374 PGAP2Q9UHJ9 254 aa29.61■■■□□ 2.33
YIF1A-213ENST00000534374 RPS12P25398 132 aaKnown RBP29.6■■■□□ 2.33
YIF1A-213ENST00000534374 GPR101Q96P66 508 aaPredicted RBP29.6■■■□□ 2.33
YIF1A-213ENST00000534374 G3V3G9 751 aa29.59■■■□□ 2.33
YIF1A-213ENST00000534374 IGHMBP2P38935 993 aaKnown RBP29.59■■■□□ 2.33
YIF1A-213ENST00000534374 DCAF8Q5TAQ9 597 aa29.59■■■□□ 2.33
YIF1A-213ENST00000534374 ITGA6P23229 1130 aa29.58■■■□□ 2.33
YIF1A-213ENST00000534374 KCNQ5Q9NR82 932 aa29.58■■■□□ 2.33
YIF1A-213ENST00000534374 ZBTB12Q9Y330 459 aaPredicted RBP29.58■■■□□ 2.33
YIF1A-213ENST00000534374 VIL1P09327 827 aaKnown RBP29.57■■■□□ 2.32
YIF1A-213ENST00000534374 SLFN5Q08AF3 891 aa29.57■■■□□ 2.32
YIF1A-213ENST00000534374 MKRN1Q9UHC7 482 aaKnown RBP29.57■■■□□ 2.32
YIF1A-213ENST00000534374 ALDH1L1O75891 902 aa29.56■■■□□ 2.32
YIF1A-213ENST00000534374 HSPA1AP0DMV8 641 aaKnown RBP29.56■■■□□ 2.32
YIF1A-213ENST00000534374 HSPA1BP0DMV9 641 aaKnown RBP29.56■■■□□ 2.32
YIF1A-213ENST00000534374 HIRAP54198 1017 aaPredicted RBP29.56■■■□□ 2.32
YIF1A-213ENST00000534374 COL13A1Q5TAT6 717 aaPredicted RBP29.56■■■□□ 2.32
YIF1A-213ENST00000534374 MICALL2Q8IY33 904 aa29.56■■■□□ 2.32
YIF1A-213ENST00000534374 CNTNAP1P78357 1384 aa29.55■■■□□ 2.32
YIF1A-213ENST00000534374 PODNQ7Z5L7 613 aa29.55■■■□□ 2.32
YIF1A-213ENST00000534374 CCT4P50991 539 aaKnown RBP29.54■■■□□ 2.32
YIF1A-213ENST00000534374 FOXO4P98177 505 aa29.54■■■□□ 2.32
YIF1A-213ENST00000534374 FAM161AQ3B820 660 aa29.54■■■□□ 2.32
YIF1A-213ENST00000534374 MPHOSPH8Q99549 860 aa29.54■■■□□ 2.32
YIF1A-213ENST00000534374 LEMD3Q9Y2U8 911 aa29.54■■■□□ 2.32
YIF1A-213ENST00000534374 GRM8O00222 908 aa29.53■■■□□ 2.32
YIF1A-213ENST00000534374 ANKRD2Q9GZV1 360 aa29.53■■■□□ 2.32
YIF1A-213ENST00000534374 SHTN1A0MZ66 631 aa29.52■■■□□ 2.32
YIF1A-213ENST00000534374 ANKRD18BA2A2Z9 1011 aa29.52■■■□□ 2.32
YIF1A-213ENST00000534374 MRPL50Q8N5N7 158 aaKnown RBP29.52■■■□□ 2.32
YIF1A-213ENST00000534374 TRPM4Q8TD43 1214 aa29.52■■■□□ 2.32
YIF1A-213ENST00000534374 SRCIN1Q9C0H9 1055 aa29.52■■■□□ 2.32
YIF1A-213ENST00000534374 RASSF10A6NK89 507 aa29.51■■■□□ 2.31
YIF1A-213ENST00000534374 DEFB115Q30KQ5 88 aa29.51■■■□□ 2.31
YIF1A-213ENST00000534374 SLC4A10Q6U841 1118 aa29.51■■■□□ 2.31
YIF1A-213ENST00000534374 C9orf78Q9NZ63 289 aaPredicted RBP29.51■■■□□ 2.31
YIF1A-213ENST00000534374 SCN9AQ15858 1988 aa29.51■■■□□ 2.31
YIF1A-213ENST00000534374 MED23Q9ULK4 1368 aa29.51■■■□□ 2.31
YIF1A-213ENST00000534374 WTIPA6NIX2 430 aaPredicted RBP29.5■■■□□ 2.31
YIF1A-213ENST00000534374 IFIT5Q13325 482 aaKnown RBP29.5■■■□□ 2.31
YIF1A-213ENST00000534374 CDC37L1Q7L3B6 337 aa29.5■■■□□ 2.31
YIF1A-213ENST00000534374 TRMT2AQ8IZ69 625 aaKnown RBP29.5■■■□□ 2.31
YIF1A-213ENST00000534374 AGBL3Q8NEM8 1001 aa29.5■■■□□ 2.31
YIF1A-213ENST00000534374 TRAF5O00463 557 aa29.49■■■□□ 2.31
YIF1A-213ENST00000534374 CST9Q5W186 159 aa29.49■■■□□ 2.31
YIF1A-213ENST00000534374 SAMD7Q7Z3H4 446 aa29.49■■■□□ 2.31
YIF1A-213ENST00000534374 PTPRCP08575 1304 aa29.48■■■□□ 2.31
YIF1A-213ENST00000534374 VEGFBP49765 207 aa29.48■■■□□ 2.31
YIF1A-213ENST00000534374 FMR1Q06787 632 aaKnown RBP eCLIP29.48■■■□□ 2.31
YIF1A-213ENST00000534374 RSBN1LQ6PCB5 846 aaPredicted RBP29.48■■■□□ 2.31
YIF1A-213ENST00000534374 TNS4Q8IZW8 715 aa29.48■■■□□ 2.31
YIF1A-213ENST00000534374 CDCA7LQ96GN5 454 aa29.48■■■□□ 2.31
YIF1A-213ENST00000534374 USP17L3A6NCW0 530 aa29.47■■■□□ 2.31
YIF1A-213ENST00000534374 USP17L4A6NCW7 530 aa29.47■■■□□ 2.31
YIF1A-213ENST00000534374 LMBR1LQ6UX01 489 aa29.47■■■□□ 2.31
YIF1A-213ENST00000534374 USP17L1Q7RTZ2 530 aa29.47■■■□□ 2.31
YIF1A-213ENST00000534374 SSH1Q8WYL5 1049 aa29.47■■■□□ 2.31
YIF1A-213ENST00000534374 COA1Q9GZY4 146 aa29.47■■■□□ 2.31
YIF1A-213ENST00000534374 ABT1Q9ULW3 272 aaKnown RBP29.47■■■□□ 2.31
YIF1A-213ENST00000534374 ZNF804BA4D1E1 1349 aa29.46■■■□□ 2.31
YIF1A-213ENST00000534374 ZNF609O15014 1411 aa29.46■■■□□ 2.31
YIF1A-213ENST00000534374 TBC1D10BQ4KMP7 808 aaPredicted RBP29.46■■■□□ 2.31
YIF1A-213ENST00000534374 GLIS2Q9BZE0 524 aaPredicted RBP29.46■■■□□ 2.31
YIF1A-213ENST00000534374 TRPM7Q96QT4 1865 aa29.46■■■□□ 2.31
YIF1A-213ENST00000534374 CHRNDQ07001 517 aa29.45■■■□□ 2.31
YIF1A-213ENST00000534374 ALDH1L2Q3SY69 923 aa29.45■■■□□ 2.31
YIF1A-213ENST00000534374 EPHA10Q5JZY3 1008 aa29.45■■■□□ 2.31
YIF1A-213ENST00000534374 GMLQ99445 158 aa29.45■■■□□ 2.31
YIF1A-213ENST00000534374 CHMP3Q9Y3E7 222 aa29.45■■■□□ 2.31
YIF1A-213ENST00000534374 SPEF2Q9C093 1822 aa29.44■■■□□ 2.3
YIF1A-213ENST00000534374 ZNF280AP59817 542 aaPredicted RBP29.44■■■□□ 2.3
YIF1A-213ENST00000534374 CCDC57Q2TAC2 916 aa29.44■■■□□ 2.3
YIF1A-213ENST00000534374 UTYO14607 1347 aa29.44■■■□□ 2.3
YIF1A-213ENST00000534374 EGFRP00533 1210 aa29.43■■■□□ 2.3
YIF1A-213ENST00000534374 CT47B1P0C2W7 299 aaPredicted RBP29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms