RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 EPXP11678 715 aa11.2□□□□□ -0.62
CASP4-213ENST00000534356 ELOA3BQ3SY89 546 aa11.2□□□□□ -0.62
CASP4-213ENST00000534356 GALNT6Q8NCL4 622 aa11.2□□□□□ -0.62
CASP4-213ENST00000534356 ELOA3Q8NG57 546 aa11.2□□□□□ -0.62
CASP4-213ENST00000534356 PMEPA1Q969W9 287 aa11.2□□□□□ -0.62
CASP4-213ENST00000534356 SLC6A14Q9UN76 642 aa11.2□□□□□ -0.62
CASP4-213ENST00000534356 HYAL2Q12891 473 aa11.19□□□□□ -0.62
CASP4-213ENST00000534356 RGS22Q8NE09 1264 aa11.19□□□□□ -0.62
CASP4-213ENST00000534356 EDARADDQ8WWZ3 215 aa11.19□□□□□ -0.62
CASP4-213ENST00000534356 DNAJC25Q9H1X3 360 aa11.19□□□□□ -0.62
CASP4-213ENST00000534356 SALL4Q9UJQ4 1053 aa11.19□□□□□ -0.62
CASP4-213ENST00000534356 AMOTL2Q9Y2J4 779 aa11.19□□□□□ -0.62
CASP4-213ENST00000534356 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
CASP4-213ENST00000534356 PNMA6FA0A0J9YX94 578 aa11.18□□□□□ -0.62
CASP4-213ENST00000534356 SIK1P57059 783 aa11.18□□□□□ -0.62
CASP4-213ENST00000534356 ENOX2Q16206 610 aaKnown RBP11.18□□□□□ -0.62
CASP4-213ENST00000534356 ZNF385CQ66K41 422 aaPredicted RBP11.18□□□□□ -0.62
CASP4-213ENST00000534356 SHISA8B8ZZ34 492 aa11.17□□□□□ -0.62
CASP4-213ENST00000534356 KIF4AO95239 1232 aa11.17□□□□□ -0.62
CASP4-213ENST00000534356 CPB1P15086 417 aa11.17□□□□□ -0.62
CASP4-213ENST00000534356 COL19A1Q14993 1142 aa11.17□□□□□ -0.62
CASP4-213ENST00000534356 PCSK7Q16549 785 aa11.17□□□□□ -0.62
CASP4-213ENST00000534356 FAM35AQ86V20 835 aa11.17□□□□□ -0.62
CASP4-213ENST00000534356 NCAPG2Q86XI2 1143 aa11.17□□□□□ -0.62
CASP4-213ENST00000534356 SETDB2Q96T68 719 aa11.17□□□□□ -0.62
CASP4-213ENST00000534356 NAGPAQ9UK23 515 aa11.17□□□□□ -0.62
CASP4-213ENST00000534356 WWC3Q9ULE0 1092 aa11.17□□□□□ -0.62
CASP4-213ENST00000534356 ALAS2P22557 587 aa11.16□□□□□ -0.62
CASP4-213ENST00000534356 EAPPQ56P03 285 aaPredicted RBP11.16□□□□□ -0.62
CASP4-213ENST00000534356 LRRC4BQ9NT99 713 aa11.16□□□□□ -0.62
CASP4-213ENST00000534356 ACPPP15309 386 aa11.15□□□□□ -0.62
CASP4-213ENST00000534356 LORP23490 312 aaPredicted RBP11.15□□□□□ -0.62
CASP4-213ENST00000534356 FBXO33Q7Z6M2 555 aa11.15□□□□□ -0.62
CASP4-213ENST00000534356 GALNT12Q8IXK2 581 aa11.15□□□□□ -0.62
CASP4-213ENST00000534356 CCDC74AQ96AQ1 378 aa11.15□□□□□ -0.62
CASP4-213ENST00000534356 STARD13Q9Y3M8 1113 aa11.15□□□□□ -0.62
CASP4-213ENST00000534356 EIF2AK2P19525 551 aaKnown RBP11.14□□□□□ -0.63
CASP4-213ENST00000534356 TAGLNQ01995 201 aaKnown RBP11.14□□□□□ -0.63
CASP4-213ENST00000534356 PERM1Q5SV97 790 aa11.14□□□□□ -0.63
CASP4-213ENST00000534356 SVOPQ8N4V2 548 aa11.14□□□□□ -0.63
CASP4-213ENST00000534356 CEP120Q8N960 986 aa11.14□□□□□ -0.63
CASP4-213ENST00000534356 BTBD6Q96KE9 485 aa11.14□□□□□ -0.63
CASP4-213ENST00000534356 LATS2Q9NRM7 1088 aa11.14□□□□□ -0.63
CASP4-213ENST00000534356 LDHBP07195 334 aaKnown RBP11.13□□□□□ -0.63
CASP4-213ENST00000534356 CHSY3Q70JA7 882 aa11.13□□□□□ -0.63
CASP4-213ENST00000534356 SPACA7Q96KW9 195 aa11.13□□□□□ -0.63
CASP4-213ENST00000534356 NPHS2Q9NP85 383 aa11.13□□□□□ -0.63
CASP4-213ENST00000534356 GHRHP01286 108 aa11.12□□□□□ -0.63
CASP4-213ENST00000534356 EDN3P14138 238 aa11.12□□□□□ -0.63
CASP4-213ENST00000534356 IRS1P35568 1242 aa11.12□□□□□ -0.63
CASP4-213ENST00000534356 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
CASP4-213ENST00000534356 PEAR1Q5VY43 1037 aaPredicted RBP11.12□□□□□ -0.63
CASP4-213ENST00000534356 EPS8L3Q8TE67 593 aaKnown RBP11.12□□□□□ -0.63
CASP4-213ENST00000534356 FOXD4L4Q8WXT5 416 aaPredicted RBP11.12□□□□□ -0.63
CASP4-213ENST00000534356 LPIN3Q9BQK8 851 aa11.12□□□□□ -0.63
CASP4-213ENST00000534356 BCL2L13Q9BXK5 485 aa11.12□□□□□ -0.63
CASP4-213ENST00000534356 TRPA1O75762 1119 aa11.11□□□□□ -0.63
CASP4-213ENST00000534356 ATP11AP98196 1134 aa11.11□□□□□ -0.63
CASP4-213ENST00000534356 PSAPL1Q6NUJ1 521 aa11.11□□□□□ -0.63
CASP4-213ENST00000534356 ELMSAN1Q6PJG2 1045 aa11.11□□□□□ -0.63
CASP4-213ENST00000534356 NUDT8Q8WV74 236 aa11.11□□□□□ -0.63
CASP4-213ENST00000534356 RASSF4Q9H2L5 321 aa11.11□□□□□ -0.63
CASP4-213ENST00000534356 ARHGEF15O94989 841 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 ALBP02768 609 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 AMPD1P23109 780 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 ATP2B2Q01814 1243 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 ALG1LQ6GMV1 187 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 PI16Q6UXB8 463 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 C20orf204Q6ZNR8 217 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 ZSCAN1Q8NBB4 408 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 PLD4Q96BZ4 506 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 ZKSCAN3Q9BRR0 538 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 SMG9Q9H0W8 520 aaKnown RBP11.1□□□□□ -0.63
CASP4-213ENST00000534356 RBSNQ9H1K0 784 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 DZANK1Q9NVP4 752 aa11.1□□□□□ -0.63
CASP4-213ENST00000534356 A0A1W2PP55 124 aa11.09□□□□□ -0.63
CASP4-213ENST00000534356 HHIPQ96QV1 700 aa11.09□□□□□ -0.63
CASP4-213ENST00000534356 OSMRQ99650 979 aa11.09□□□□□ -0.63
CASP4-213ENST00000534356 PBX4Q9BYU1 374 aa11.09□□□□□ -0.63
CASP4-213ENST00000534356 RNF19AQ9NV58 838 aa11.09□□□□□ -0.63
CASP4-213ENST00000534356 FRRS1LQ9P0K9 344 aa11.09□□□□□ -0.63
CASP4-213ENST00000534356 NFKBIEO00221 500 aa11.08□□□□□ -0.64
CASP4-213ENST00000534356 KANK3Q6NY19 840 aa11.08□□□□□ -0.64
CASP4-213ENST00000534356 C8orf86Q6ZUL3 223 aa11.08□□□□□ -0.64
CASP4-213ENST00000534356 MICALL1Q8N3F8 863 aa11.08□□□□□ -0.64
CASP4-213ENST00000534356 NEDD1Q8NHV4 660 aa11.08□□□□□ -0.64
CASP4-213ENST00000534356 FBF1Q8TES7 1133 aa11.08□□□□□ -0.64
CASP4-213ENST00000534356 GIPC2Q8TF65 315 aa11.08□□□□□ -0.64
CASP4-213ENST00000534356 M0R082 166 aa11.07□□□□□ -0.64
CASP4-213ENST00000534356 PRPF40AO75400 957 aaKnown RBP11.07□□□□□ -0.64
CASP4-213ENST00000534356 RGS9O75916 674 aaPredicted RBP11.07□□□□□ -0.64
CASP4-213ENST00000534356 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.07□□□□□ -0.64
CASP4-213ENST00000534356 ZNF417Q8TAU3 575 aa11.07□□□□□ -0.64
CASP4-213ENST00000534356 ZNF587Q96SQ5 575 aaPredicted RBP11.07□□□□□ -0.64
CASP4-213ENST00000534356 ENAMQ9NRM1 1142 aa11.07□□□□□ -0.64
CASP4-213ENST00000534356 HOXB4P17483 251 aaPredicted RBP11.06□□□□□ -0.64
CASP4-213ENST00000534356 KIAA0319Q5VV43 1072 aa11.06□□□□□ -0.64
CASP4-213ENST00000534356 CEP135Q66GS9 1140 aa11.06□□□□□ -0.64
CASP4-213ENST00000534356 DUSP9Q99956 384 aaKnown RBP11.06□□□□□ -0.64
CASP4-213ENST00000534356 JPH1Q9HDC5 661 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms