RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 MAP3K4Q9Y6R4 1608 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 MAPK8IP2Q13387 824 aaPredicted RBP19.92■□□□□ 0.78
PHRF1-206ENST00000534320 LRSAM1Q6UWE0 723 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
PHRF1-206ENST00000534320 NLRP1Q9C000 1473 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 CCDC171Q6TFL3 1326 aa19.91■□□□□ 0.78
PHRF1-206ENST00000534320 CNNM3Q8NE01 707 aa19.91■□□□□ 0.78
PHRF1-206ENST00000534320 NLRP3Q96P20 1036 aa19.91■□□□□ 0.78
PHRF1-206ENST00000534320 TANGO6Q9C0B7 1094 aa19.91■□□□□ 0.78
PHRF1-206ENST00000534320 CALCOCO1Q9P1Z2 691 aa19.91■□□□□ 0.78
PHRF1-206ENST00000534320 TSPY2A6NKD2 308 aa19.91■□□□□ 0.78
PHRF1-206ENST00000534320 CT47A1Q5JQC4 288 aaPredicted RBP19.91■□□□□ 0.78
PHRF1-206ENST00000534320 SLC4A4Q9Y6R1 1079 aa19.91■□□□□ 0.78
PHRF1-206ENST00000534320 RUFY3Q7L099 469 aa19.9■□□□□ 0.78
PHRF1-206ENST00000534320 CRNKL1Q9BZJ0 848 aaKnown RBP19.9■□□□□ 0.78
PHRF1-206ENST00000534320 ZBTB43O43298 467 aa19.9■□□□□ 0.78
PHRF1-206ENST00000534320 WTAPQ15007 396 aa19.9■□□□□ 0.78
PHRF1-206ENST00000534320 SUCLG2Q96I99 432 aa19.9■□□□□ 0.78
PHRF1-206ENST00000534320 CNNM2Q9H8M5 875 aa19.9■□□□□ 0.78
PHRF1-206ENST00000534320 ARHGAP31Q2M1Z3 1444 aa19.9■□□□□ 0.78
PHRF1-206ENST00000534320 CCDC194A0A1B0GVG4 234 aa19.9■□□□□ 0.78
PHRF1-206ENST00000534320 KIF5BP33176 963 aa19.9■□□□□ 0.78
PHRF1-206ENST00000534320 KLHDC4Q8TBB5 520 aa19.9■□□□□ 0.78
PHRF1-206ENST00000534320 ZNF496Q96IT1 587 aaPredicted RBP19.9■□□□□ 0.78
PHRF1-206ENST00000534320 TSPOAP1O95153 1857 aa19.9■□□□□ 0.78
PHRF1-206ENST00000534320 UBAP1LF5GYI3 381 aa19.89■□□□□ 0.78
PHRF1-206ENST00000534320 FAM177A1Q8N128 213 aaPredicted RBP19.89■□□□□ 0.78
PHRF1-206ENST00000534320 SFPQP23246 707 aaKnown RBP eCLIP19.89■□□□□ 0.784e-6■■■□□ 17.7
PHRF1-206ENST00000534320 STX1AQ16623 288 aa19.89■□□□□ 0.78
PHRF1-206ENST00000534320 ERICH4A6NGS2 130 aa19.89■□□□□ 0.77
PHRF1-206ENST00000534320 TNNI3KQ59H18 835 aa19.89■□□□□ 0.77
PHRF1-206ENST00000534320 C8orf37Q96NL8 207 aa19.89■□□□□ 0.77
PHRF1-206ENST00000534320 FPGT-TNNI3KV9GXZ4 949 aa19.89■□□□□ 0.77
PHRF1-206ENST00000534320 EYA2O00167 538 aa19.89■□□□□ 0.77
PHRF1-206ENST00000534320 ZNF76P36508 570 aa19.89■□□□□ 0.77
PHRF1-206ENST00000534320 HELBQ8NG08 1087 aaPredicted RBP19.89■□□□□ 0.77
PHRF1-206ENST00000534320 ZMYND15Q9H091 742 aa19.89■□□□□ 0.77
PHRF1-206ENST00000534320 GIMAP6Q6P9H5 292 aa19.89■□□□□ 0.77
PHRF1-206ENST00000534320 FAM89AQ96GI7 184 aa19.89■□□□□ 0.77
PHRF1-206ENST00000534320 CLIP2Q9UDT6 1046 aa19.89■□□□□ 0.77
PHRF1-206ENST00000534320 PRC1O43663 620 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 DNM1Q05193 864 aaKnown RBP19.88■□□□□ 0.77
PHRF1-206ENST00000534320 UVSSAQ2YD98 709 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 KLHL10Q6JEL2 608 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 BCORL1Q5H9F3 1711 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 KAT6BQ8WYB5 2073 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 ZNF165P49910 485 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 GCKRQ14397 625 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 USP6P35125 1406 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 PRR36Q9H6K5 1346 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 RTL1A6NKG5 1358 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 TMTC2Q8N394 836 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 KAT14Q9H8E8 782 aa19.88■□□□□ 0.77
PHRF1-206ENST00000534320 ADCY5O95622 1261 aa19.87■□□□□ 0.77
PHRF1-206ENST00000534320 HCLS1P14317 486 aaPredicted RBP19.87■□□□□ 0.77
PHRF1-206ENST00000534320 ESR2Q92731 530 aa19.87■□□□□ 0.77
PHRF1-206ENST00000534320 GOLGA6L10A6NI86 522 aa19.87■□□□□ 0.77
PHRF1-206ENST00000534320 TIMM10P62072 90 aa19.87■□□□□ 0.77
PHRF1-206ENST00000534320 CDC42BPBQ9Y5S2 1711 aa19.87■□□□□ 0.77
PHRF1-206ENST00000534320 KCNQ3O43525 872 aa19.87■□□□□ 0.77
PHRF1-206ENST00000534320 SKIDA1Q1XH10 827 aa19.87■□□□□ 0.77
PHRF1-206ENST00000534320 ALG1Q9BT22 464 aa19.87■□□□□ 0.77
PHRF1-206ENST00000534320 A1BGP04217 495 aa19.87■□□□□ 0.77
PHRF1-206ENST00000534320 USP44Q9H0E7 712 aa19.87■□□□□ 0.77
PHRF1-206ENST00000534320 BIN1O00499 593 aa19.86■□□□□ 0.77
PHRF1-206ENST00000534320 GIGYF1O75420 1035 aaPredicted RBP19.86■□□□□ 0.77
PHRF1-206ENST00000534320 ST5P78524 1137 aa19.86■□□□□ 0.77
PHRF1-206ENST00000534320 DHX32Q7L7V1 743 aaKnown RBP19.86■□□□□ 0.77
PHRF1-206ENST00000534320 CCDC96Q2M329 555 aa19.86■□□□□ 0.77
PHRF1-206ENST00000534320 NAA16Q6N069 864 aaPredicted RBP19.86■□□□□ 0.77
PHRF1-206ENST00000534320 DBNDD2Q9BQY9 259 aa19.86■□□□□ 0.77
PHRF1-206ENST00000534320 SGSM2O43147 1006 aa19.86■□□□□ 0.77
PHRF1-206ENST00000534320 CAVIN2O95810 425 aa19.86■□□□□ 0.77
PHRF1-206ENST00000534320 A0A1B0GUL7 405 aa19.86■□□□□ 0.77
PHRF1-206ENST00000534320 GSTO1P78417 241 aa19.86■□□□□ 0.77
PHRF1-206ENST00000534320 LUC7LQ9NQ29 371 aaKnown RBP19.86■□□□□ 0.77
PHRF1-206ENST00000534320 HELLSQ9NRZ9 838 aa19.85■□□□□ 0.77
PHRF1-206ENST00000534320 XRCC6P12956 609 aaKnown RBP eCLIP19.85■□□□□ 0.77
PHRF1-206ENST00000534320 CPA1P15085 419 aa19.85■□□□□ 0.77
PHRF1-206ENST00000534320 SLC4A8Q2Y0W8 1093 aa19.85■□□□□ 0.77
PHRF1-206ENST00000534320 NYXQ9GZU5 481 aa19.85■□□□□ 0.77
PHRF1-206ENST00000534320 SPHKAPQ2M3C7 1700 aa19.85■□□□□ 0.77
PHRF1-206ENST00000534320 IGSF1Q8N6C5 1336 aa19.85■□□□□ 0.77
PHRF1-206ENST00000534320 EIF5P55010 431 aaKnown RBP19.85■□□□□ 0.77
PHRF1-206ENST00000534320 RNF17Q9BXT8 1623 aaKnown RBP19.85■□□□□ 0.77
PHRF1-206ENST00000534320 CHST3Q7LGC8 479 aa19.84■□□□□ 0.77
PHRF1-206ENST00000534320 APOBRQ0VD83 1088 aa19.84■□□□□ 0.77
PHRF1-206ENST00000534320 SLAIN2Q9P270 581 aa19.84■□□□□ 0.77
PHRF1-206ENST00000534320 RTN1Q16799 776 aa19.84■□□□□ 0.77
PHRF1-206ENST00000534320 CDCA7Q9BWT1 371 aaPredicted RBP19.84■□□□□ 0.77
PHRF1-206ENST00000534320 EPB41L2O43491 1005 aaKnown RBP19.83■□□□□ 0.77
PHRF1-206ENST00000534320 KCNG4Q8TDN1 519 aa19.83■□□□□ 0.77
PHRF1-206ENST00000534320 GNAT2P19087 354 aa19.83■□□□□ 0.76
PHRF1-206ENST00000534320 CCDC102BQ68D86 513 aa19.83■□□□□ 0.76
PHRF1-206ENST00000534320 TPTE2Q6XPS3 522 aa19.83■□□□□ 0.76
PHRF1-206ENST00000534320 SSH3Q8TE77 659 aa19.83■□□□□ 0.76
PHRF1-206ENST00000534320 CCDC12Q8WUD4 166 aaPredicted RBP19.83■□□□□ 0.76
PHRF1-206ENST00000534320 TOP1P11387 765 aaKnown RBP19.83■□□□□ 0.76
PHRF1-206ENST00000534320 PANK2Q9BZ23 570 aa19.83■□□□□ 0.76
PHRF1-206ENST00000534320 RAB34Q9BZG1 259 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms