RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 RAD17O75943 681 aa8.79□□□□□ -1
CD44-237ENST00000534082 TBC1D8O95759 1140 aa8.79□□□□□ -1
CD44-237ENST00000534082 HOXA10P31260 410 aaPredicted RBP8.79□□□□□ -1
CD44-237ENST00000534082 TEFQ10587 303 aa8.79□□□□□ -1
CD44-237ENST00000534082 MTHFSDQ2M296 383 aaKnown RBP8.79□□□□□ -1
CD44-237ENST00000534082 VPS33BQ9H267 617 aa8.79□□□□□ -1
CD44-237ENST00000534082 CNOT7Q9UIV1 285 aaKnown RBP8.79□□□□□ -1
CD44-237ENST00000534082 KIF7Q2M1P5 1343 aa8.79□□□□□ -1
CD44-237ENST00000534082 H7C1D1 291 aa8.78□□□□□ -1
CD44-237ENST00000534082 GPR25O00155 361 aa8.78□□□□□ -1
CD44-237ENST00000534082 TNIP1Q15025 636 aa8.78□□□□□ -1
CD44-237ENST00000534082 NUTM1Q86Y26 1132 aa8.78□□□□□ -1
CD44-237ENST00000534082 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
CD44-237ENST00000534082 SIPA1L3O60292 1781 aaPredicted RBP8.78□□□□□ -1
CD44-237ENST00000534082 RBBP6Q7Z6E9 1792 aaKnown RBP8.78□□□□□ -1
CD44-237ENST00000534082 CEP290O15078 2479 aa8.77□□□□□ -1.01
CD44-237ENST00000534082 PAPPA2Q9BXP8 1791 aa8.77□□□□□ -1.01
CD44-237ENST00000534082 RIMBP2O15034 1052 aa8.77□□□□□ -1.01
CD44-237ENST00000534082 HMOX1P09601 288 aa8.77□□□□□ -1.01
CD44-237ENST00000534082 TBC1D10BQ4KMP7 808 aaPredicted RBP8.77□□□□□ -1.01
CD44-237ENST00000534082 NOM1Q5C9Z4 860 aaKnown RBP8.77□□□□□ -1.01
CD44-237ENST00000534082 INTS3Q68E01 1043 aaKnown RBP8.77□□□□□ -1.01
CD44-237ENST00000534082 SAMD7Q7Z3H4 446 aa8.77□□□□□ -1.01
CD44-237ENST00000534082 SUPT20HQ8NEM7 779 aa8.77□□□□□ -1.01
CD44-237ENST00000534082 DCPSQ96C86 337 aaKnown RBP8.77□□□□□ -1.01
CD44-237ENST00000534082 RBM17Q96I25 401 aaKnown RBP8.77□□□□□ -1.01
CD44-237ENST00000534082 CRAMP1Q96RY5 1269 aa8.77□□□□□ -1.01
CD44-237ENST00000534082 NYXQ9GZU5 481 aa8.77□□□□□ -1.01
CD44-237ENST00000534082 TMX4Q9H1E5 349 aaPredicted RBP8.77□□□□□ -1.01
CD44-237ENST00000534082 LAMA3Q16787 3333 aa8.77□□□□□ -1.01
CD44-237ENST00000534082 EGFRP00533 1210 aa8.76□□□□□ -1.01
CD44-237ENST00000534082 KIAA2012Q0VF49 1180 aa8.76□□□□□ -1.01
CD44-237ENST00000534082 HLFQ16534 295 aa8.76□□□□□ -1.01
CD44-237ENST00000534082 CDCA5Q96FF9 252 aa8.76□□□□□ -1.01
CD44-237ENST00000534082 RTFDC1Q9BY42 306 aaPredicted RBP8.76□□□□□ -1.01
CD44-237ENST00000534082 USP16Q9Y5T5 823 aa8.76□□□□□ -1.01
CD44-237ENST00000534082 IBTKQ9P2D0 1353 aaPredicted RBP8.75□□□□□ -1.01
CD44-237ENST00000534082 YDJCA8MPS7 323 aa8.75□□□□□ -1.01
CD44-237ENST00000534082 KCNQ3O43525 872 aa8.75□□□□□ -1.01
CD44-237ENST00000534082 FKTNO75072 461 aa8.75□□□□□ -1.01
CD44-237ENST00000534082 PPP1R37O75864 691 aa8.75□□□□□ -1.01
CD44-237ENST00000534082 DPP8Q6V1X1 898 aaPredicted RBP8.75□□□□□ -1.01
CD44-237ENST00000534082 SULF1Q8IWU6 871 aa8.75□□□□□ -1.01
CD44-237ENST00000534082 GGA3Q9NZ52 723 aa8.75□□□□□ -1.01
CD44-237ENST00000534082 ATP6V0A2Q9Y487 856 aa8.75□□□□□ -1.01
CD44-237ENST00000534082 UNC80Q8N2C7 3258 aa8.74□□□□□ -1.01
CD44-237ENST00000534082 PRAMEF22A3QJZ6 481 aa8.74□□□□□ -1.01
CD44-237ENST00000534082 NBPF26B4DH59 902 aa8.74□□□□□ -1.01
CD44-237ENST00000534082 H0YGN5 161 aa8.74□□□□□ -1.01
CD44-237ENST00000534082 EN2P19622 333 aaPredicted RBP8.74□□□□□ -1.01
CD44-237ENST00000534082 NBPF10Q6P3W6 841 aaKnown RBP8.74□□□□□ -1.01
CD44-237ENST00000534082 MORC1Q86VD1 984 aa8.74□□□□□ -1.01
CD44-237ENST00000534082 IL17REQ8NFR9 667 aa8.74□□□□□ -1.01
CD44-237ENST00000534082 DPF2Q92785 391 aa8.74□□□□□ -1.01
CD44-237ENST00000534082 HS3ST6Q96QI5 342 aa8.74□□□□□ -1.01
CD44-237ENST00000534082 TRIM17Q9Y577 477 aa8.74□□□□□ -1.01
CD44-237ENST00000534082 KIAA0100Q14667 2235 aaKnown RBP8.74□□□□□ -1.01
CD44-237ENST00000534082 DUOX1Q9NRD9 1551 aa8.73□□□□□ -1.01
CD44-237ENST00000534082 GNAT3A8MTJ3 354 aa8.73□□□□□ -1.01
CD44-237ENST00000534082 FKBP1BP68106 108 aa8.73□□□□□ -1.01
CD44-237ENST00000534082 RBM26Q5T8P6 1007 aaKnown RBP8.73□□□□□ -1.01
CD44-237ENST00000534082 POLR3GLQ9BT43 218 aa8.73□□□□□ -1.01
CD44-237ENST00000534082 ABCC4O15439 1325 aa8.73□□□□□ -1.01
CD44-237ENST00000534082 ASTN2O75129 1339 aaPredicted RBP8.73□□□□□ -1.01
CD44-237ENST00000534082 UBN2Q6ZU65 1347 aa8.73□□□□□ -1.01
CD44-237ENST00000534082 CEMIPQ8WUJ3 1361 aa8.73□□□□□ -1.01
CD44-237ENST00000534082 C2orf72A6NCS6 295 aa8.72□□□□□ -1.01
CD44-237ENST00000534082 BTBD11A6QL63 1104 aa8.72□□□□□ -1.01
CD44-237ENST00000534082 PSMD14O00487 310 aa8.72□□□□□ -1.01
CD44-237ENST00000534082 HOXB1P14653 301 aaPredicted RBP8.72□□□□□ -1.01
CD44-237ENST00000534082 TM4SF4P48230 202 aa8.72□□□□□ -1.01
CD44-237ENST00000534082 KIF4BQ2VIQ3 1234 aa8.72□□□□□ -1.01
CD44-237ENST00000534082 OTOP1Q7RTM1 612 aa8.72□□□□□ -1.01
CD44-237ENST00000534082 MPNDQ8N594 471 aa8.72□□□□□ -1.01
CD44-237ENST00000534082 TMC2Q8TDI7 906 aa8.72□□□□□ -1.01
CD44-237ENST00000534082 CFHR5Q9BXR6 569 aa8.72□□□□□ -1.01
CD44-237ENST00000534082 R3HDMLQ9H3Y0 253 aa8.72□□□□□ -1.01
CD44-237ENST00000534082 NTSR2O95665 410 aa8.71□□□□□ -1.02
CD44-237ENST00000534082 SNRPA1P09661 255 aaKnown RBP8.71□□□□□ -1.02
CD44-237ENST00000534082 GPTP24298 496 aa8.71□□□□□ -1.02
CD44-237ENST00000534082 RPS12P25398 132 aaKnown RBP8.71□□□□□ -1.02
CD44-237ENST00000534082 SREBF2Q12772 1141 aa8.71□□□□□ -1.02
CD44-237ENST00000534082 MOB2Q70IA6 237 aa8.71□□□□□ -1.02
CD44-237ENST00000534082 GAS2L2Q8NHY3 880 aa8.71□□□□□ -1.02
CD44-237ENST00000534082 ARMC5Q96C12 935 aa8.71□□□□□ -1.02
CD44-237ENST00000534082 RBM27Q9P2N5 1060 aaKnown RBP8.71□□□□□ -1.02
CD44-237ENST00000534082 POLR2AP24928 1970 aaKnown RBP8.71□□□□□ -1.02
CD44-237ENST00000534082 ZNF609O15014 1411 aa8.71□□□□□ -1.02
CD44-237ENST00000534082 VCANP13611 3396 aa8.7□□□□□ -1.02
CD44-237ENST00000534082 POTEB3A0JP26 581 aa8.7□□□□□ -1.02
CD44-237ENST00000534082 UBE2Q2LH0YL09 131 aa8.7□□□□□ -1.02
CD44-237ENST00000534082 SUSD4Q5VX71 490 aa8.7□□□□□ -1.02
CD44-237ENST00000534082 POTEBQ6S5H4 581 aa8.7□□□□□ -1.02
CD44-237ENST00000534082 SP8Q8IXZ3 490 aa8.7□□□□□ -1.02
CD44-237ENST00000534082 PITPNM2Q9BZ72 1349 aa8.7□□□□□ -1.02
CD44-237ENST00000534082 LAMB4A4D0S4 1761 aa8.69□□□□□ -1.02
CD44-237ENST00000534082 ERVV-1B6SEH8 477 aa8.69□□□□□ -1.02
CD44-237ENST00000534082 ANGEL2Q5VTE6 544 aaKnown RBP8.69□□□□□ -1.02
CD44-237ENST00000534082 NLRP3Q96P20 1036 aa8.69□□□□□ -1.02
CD44-237ENST00000534082 PANK3Q9H999 370 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms