RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 ZNF827Q17R98 1081 aa11.57□□□□□ -0.56
RTL1-201ENST00000534062 ATG9AQ7Z3C6 839 aa11.57□□□□□ -0.56
RTL1-201ENST00000534062 KIAA1211Q6ZU35 1233 aa11.57□□□□□ -0.56
RTL1-201ENST00000534062 DDX46Q7L014 1031 aaKnown RBP11.57□□□□□ -0.56
RTL1-201ENST00000534062 NHSQ6T4R5 1651 aa11.57□□□□□ -0.56
RTL1-201ENST00000534062 CSF1RP07333 972 aa11.57□□□□□ -0.56
RTL1-201ENST00000534062 SSFA2P28290 1259 aa11.57□□□□□ -0.56
RTL1-201ENST00000534062 TTC41PQ6P2S7 1318 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 IFIT1P09914 478 aaKnown RBP11.56□□□□□ -0.56
RTL1-201ENST00000534062 ST5P78524 1137 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 RPGRQ92834 1020 aaKnown RBP11.56□□□□□ -0.56
RTL1-201ENST00000534062 PLA2G12BQ9BX93 195 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 STK32BQ9NY57 414 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 NUP98P52948 1817 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 SERPINB2P05120 415 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 ADRA2BP18089 450 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 C3orf67Q6ZVT6 689 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 VPS37DQ86XT2 251 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 GOLIM4O00461 696 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 PLSCR1O15162 318 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 ADORA1P30542 326 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 OSBPL3Q9H4L5 887 aa11.56□□□□□ -0.56
RTL1-201ENST00000534062 REC8O95072 547 aa11.55□□□□□ -0.56
RTL1-201ENST00000534062 GYS1P13807 737 aa11.55□□□□□ -0.56
RTL1-201ENST00000534062 HMGB2P26583 209 aaKnown RBP11.55□□□□□ -0.56
RTL1-201ENST00000534062 PI4K2BQ8TCG2 481 aa11.55□□□□□ -0.56
RTL1-201ENST00000534062 STAP2Q9UGK3 403 aa11.55□□□□□ -0.56
RTL1-201ENST00000534062 IQSEC3Q9UPP2 1182 aaPredicted RBP11.55□□□□□ -0.56
RTL1-201ENST00000534062 FSD2A1L4K1 749 aa11.55□□□□□ -0.56
RTL1-201ENST00000534062 MCCP23508 829 aa11.55□□□□□ -0.56
RTL1-201ENST00000534062 SPRYD3Q8NCJ5 442 aa11.55□□□□□ -0.56
RTL1-201ENST00000534062 BBXQ8WY36 941 aaPredicted RBP11.55□□□□□ -0.56
RTL1-201ENST00000534062 XAGE2Q96GT9 111 aa11.55□□□□□ -0.56
RTL1-201ENST00000534062 TPM2P07951 284 aa11.54□□□□□ -0.56
RTL1-201ENST00000534062 COL23A1Q86Y22 540 aaPredicted RBP11.54□□□□□ -0.56
RTL1-201ENST00000534062 HSCBQ8IWL3 235 aa11.54□□□□□ -0.56
RTL1-201ENST00000534062 NUP188Q5SRE5 1749 aa11.54□□□□□ -0.56
RTL1-201ENST00000534062 CIAO1O76071 339 aa11.54□□□□□ -0.56
RTL1-201ENST00000534062 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
RTL1-201ENST00000534062 CELF1Q92879 486 aaKnown RBP11.53□□□□□ -0.56
RTL1-201ENST00000534062 ANKIB1Q9P2G1 1089 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 N4BP2Q86UW6 1770 aaPredicted RBP11.53□□□□□ -0.56
RTL1-201ENST00000534062 CARMIL3Q8ND23 1372 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 GOLGA6L3A6NEY3 463 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 ESPNB1AK53 854 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 SLC5A1P13866 664 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 CHMLP26374 656 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 KLHL34Q8N239 644 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 EVI5LQ96CN4 794 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 PARP3Q9Y6F1 533 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 MMP10P09238 476 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 RUFY2Q8WXA3 655 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 ZHX1Q9UKY1 873 aaPredicted RBP11.53□□□□□ -0.56
RTL1-201ENST00000534062 ILDR1Q86SU0 546 aaPredicted RBP11.53□□□□□ -0.56
RTL1-201ENST00000534062 SBF2Q86WG5 1849 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 SALL3Q9BXA9 1300 aa11.53□□□□□ -0.56
RTL1-201ENST00000534062 ZNF219Q9P2Y4 722 aaPredicted RBP11.53□□□□□ -0.56
RTL1-201ENST00000534062 AOX1Q06278 1338 aa11.52□□□□□ -0.56
RTL1-201ENST00000534062 PDE8BO95263 885 aa11.52□□□□□ -0.56
RTL1-201ENST00000534062 RPS8P62241 208 aaKnown RBP11.52□□□□□ -0.56
RTL1-201ENST00000534062 CHRNDQ07001 517 aa11.52□□□□□ -0.56
RTL1-201ENST00000534062 PPP1R1BQ9UD71 204 aaPredicted RBP11.52□□□□□ -0.56
RTL1-201ENST00000534062 RIPOR2Q9Y4F9 1068 aa11.52□□□□□ -0.56
RTL1-201ENST00000534062 WASHC4Q2M389 1173 aa11.52□□□□□ -0.57
RTL1-201ENST00000534062 PRR5LQ6MZQ0 368 aa11.52□□□□□ -0.57
RTL1-201ENST00000534062 NLGN1Q8N2Q7 840 aa11.52□□□□□ -0.57
RTL1-201ENST00000534062 NAP1L2Q9ULW6 460 aaPredicted RBP11.52□□□□□ -0.57
RTL1-201ENST00000534062 PI16Q6UXB8 463 aa11.52□□□□□ -0.57
RTL1-201ENST00000534062 TBC1D32Q96NH3 1257 aa11.52□□□□□ -0.57
RTL1-201ENST00000534062 ESYT1Q9BSJ8 1104 aa11.52□□□□□ -0.57
RTL1-201ENST00000534062 WWC3Q9ULE0 1092 aa11.52□□□□□ -0.57
RTL1-201ENST00000534062 C4BP0C0L5 1744 aa11.51□□□□□ -0.57
RTL1-201ENST00000534062 PUM3Q15397 648 aaKnown RBP11.51□□□□□ -0.57
RTL1-201ENST00000534062 IDH1O75874 414 aaKnown RBP11.51□□□□□ -0.57
RTL1-201ENST00000534062 FLAD1Q8NFF5 587 aa11.51□□□□□ -0.57
RTL1-201ENST00000534062 TAOK2Q9UL54 1235 aa11.51□□□□□ -0.57
RTL1-201ENST00000534062 MROH5Q6ZUA9 1318 aa11.51□□□□□ -0.57
RTL1-201ENST00000534062 NOL8Q76FK4 1167 aaKnown RBP11.51□□□□□ -0.57
RTL1-201ENST00000534062 ZNF622Q969S3 477 aaKnown RBP eCLIP11.51□□□□□ -0.57
RTL1-201ENST00000534062 PAG1Q9NWQ8 432 aa11.51□□□□□ -0.57
RTL1-201ENST00000534062 ATP5JP18859 108 aa11.5□□□□□ -0.57
RTL1-201ENST00000534062 GZF1Q9H116 711 aaPredicted RBP11.5□□□□□ -0.57
RTL1-201ENST00000534062 FBXO3Q9UK99 471 aa11.5□□□□□ -0.57
RTL1-201ENST00000534062 FAM227BQ96M60 508 aa11.5□□□□□ -0.57
RTL1-201ENST00000534062 TMX4Q9H1E5 349 aaPredicted RBP11.5□□□□□ -0.57
RTL1-201ENST00000534062 SLKQ9H2G2 1235 aaPredicted RBP11.5□□□□□ -0.57
RTL1-201ENST00000534062 GOLGA6L22H0YM25 854 aa11.5□□□□□ -0.57
RTL1-201ENST00000534062 PHKA1P46020 1223 aa11.5□□□□□ -0.57
RTL1-201ENST00000534062 SLC15A2Q16348 729 aa11.5□□□□□ -0.57
RTL1-201ENST00000534062 LPIN2Q92539 896 aa11.5□□□□□ -0.57
RTL1-201ENST00000534062 NSFL1CQ9UNZ2 370 aaKnown RBP11.5□□□□□ -0.57
RTL1-201ENST00000534062 DDR1Q08345 913 aa11.49□□□□□ -0.57
RTL1-201ENST00000534062 NMIQ13287 307 aaPredicted RBP11.49□□□□□ -0.57
RTL1-201ENST00000534062 ABCF2Q9UG63 623 aa11.49□□□□□ -0.57
RTL1-201ENST00000534062 ANTXR1Q9H6X2 564 aa11.49□□□□□ -0.57
RTL1-201ENST00000534062 JAG2Q9Y219 1238 aa11.49□□□□□ -0.57
RTL1-201ENST00000534062 ZAP70P43403 619 aa11.49□□□□□ -0.57
RTL1-201ENST00000534062 BCAMP50895 628 aa11.49□□□□□ -0.57
RTL1-201ENST00000534062 CHAF1AQ13111 956 aaPredicted RBP11.49□□□□□ -0.57
RTL1-201ENST00000534062 SF3B3Q15393 1217 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms