RNA–Protein interactions for RNA: ENST00000533948.1

SHARPIN-208, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 5

Gene SHARPIN, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-208ENST00000533948 ATP5J2-PTCD1G3V325 749 aa18.63■□□□□ 0.57
SHARPIN-208ENST00000533948 TRPA1O75762 1119 aa18.63■□□□□ 0.57
SHARPIN-208ENST00000533948 RPS12P25398 132 aaKnown RBP18.63■□□□□ 0.57
SHARPIN-208ENST00000533948 SF3B3Q15393 1217 aaKnown RBP18.63■□□□□ 0.57
SHARPIN-208ENST00000533948 RTL5Q5HYW3 569 aaPredicted RBP18.63■□□□□ 0.57
SHARPIN-208ENST00000533948 C2orf69Q8N8R5 385 aa18.63■□□□□ 0.57
SHARPIN-208ENST00000533948 DCPSQ96C86 337 aaKnown RBP18.63■□□□□ 0.57
SHARPIN-208ENST00000533948 RNF186Q9NXI6 227 aa18.63■□□□□ 0.57
SHARPIN-208ENST00000533948 KIF4BQ2VIQ3 1234 aa18.62■□□□□ 0.57
SHARPIN-208ENST00000533948 HDGFL1Q5TGJ6 251 aa18.62■□□□□ 0.57
SHARPIN-208ENST00000533948 PRKRIP1Q9H875 184 aaPredicted RBP18.62■□□□□ 0.57
SHARPIN-208ENST00000533948 SAGE1Q9NXZ1 904 aa18.62■□□□□ 0.57
SHARPIN-208ENST00000533948 GGA3Q9NZ52 723 aa18.62■□□□□ 0.57
SHARPIN-208ENST00000533948 DBF4Q9UBU7 674 aaPredicted RBP18.62■□□□□ 0.57
SHARPIN-208ENST00000533948 G3V3G9 751 aa18.61■□□□□ 0.57
SHARPIN-208ENST00000533948 ZEB1P37275 1124 aaPredicted RBP18.61■□□□□ 0.57
SHARPIN-208ENST00000533948 DCAF8Q5TAQ9 597 aa18.61■□□□□ 0.57
SHARPIN-208ENST00000533948 CCDC102AQ96A19 550 aa18.61■□□□□ 0.57
SHARPIN-208ENST00000533948 ISCA1Q9BUE6 129 aa18.61■□□□□ 0.57
SHARPIN-208ENST00000533948 AKAP11Q9UKA4 1901 aa18.61■□□□□ 0.57
SHARPIN-208ENST00000533948 SLC10A3P09131 477 aa18.6■□□□□ 0.57
SHARPIN-208ENST00000533948 HOXB7P09629 217 aa18.6■□□□□ 0.57
SHARPIN-208ENST00000533948 RPS8P62241 208 aaKnown RBP18.6■□□□□ 0.57
SHARPIN-208ENST00000533948 CCDC146Q8IYE0 955 aa18.6■□□□□ 0.57
SHARPIN-208ENST00000533948 TBC1D16Q8TBP0 767 aa18.6■□□□□ 0.57
SHARPIN-208ENST00000533948 CSRNP1Q96S65 589 aa18.6■□□□□ 0.57
SHARPIN-208ENST00000533948 ZC3H12CQ9C0D7 883 aaKnown RBP18.6■□□□□ 0.57
SHARPIN-208ENST00000533948 HYPKQ9NX55 129 aa18.6■□□□□ 0.57
SHARPIN-208ENST00000533948 HSP90B1P14625 803 aaKnown RBP18.59■□□□□ 0.57
SHARPIN-208ENST00000533948 CDCA5Q96FF9 252 aa18.59■□□□□ 0.57
SHARPIN-208ENST00000533948 IRS4O14654 1257 aaPredicted RBP18.58■□□□□ 0.56
SHARPIN-208ENST00000533948 TRIM28Q13263 835 aaKnown RBP18.58■□□□□ 0.56
SHARPIN-208ENST00000533948 WDR43Q15061 677 aaKnown RBP eCLIP18.58■□□□□ 0.56
SHARPIN-208ENST00000533948 SULF1Q8IWU6 871 aa18.58■□□□□ 0.56
SHARPIN-208ENST00000533948 RUNDC1Q96C34 613 aa18.58■□□□□ 0.56
SHARPIN-208ENST00000533948 VIL1P09327 827 aaKnown RBP18.57■□□□□ 0.56
SHARPIN-208ENST00000533948 RASAL3Q86YV0 1011 aa18.57■□□□□ 0.56
SHARPIN-208ENST00000533948 SEC31BQ9NQW1 1179 aa18.57■□□□□ 0.56
SHARPIN-208ENST00000533948 ADAMTS8Q9UP79 889 aa18.57■□□□□ 0.56
SHARPIN-208ENST00000533948 ANGEL2Q5VTE6 544 aaKnown RBP18.56■□□□□ 0.56
SHARPIN-208ENST00000533948 RIC3Q7Z5B4 369 aa18.56■□□□□ 0.56
SHARPIN-208ENST00000533948 PCDH10Q9P2E7 1040 aa18.56■□□□□ 0.56
SHARPIN-208ENST00000533948 ANKIB1Q9P2G1 1089 aa18.56■□□□□ 0.56
SHARPIN-208ENST00000533948 SCAF8Q9UPN6 1271 aaKnown RBP18.56■□□□□ 0.56
SHARPIN-208ENST00000533948 TRIM35Q9UPQ4 493 aa18.56■□□□□ 0.56
SHARPIN-208ENST00000533948 UFL1O94874 794 aa18.55■□□□□ 0.56
SHARPIN-208ENST00000533948 DUSP27Q5VZP5 1158 aa18.55■□□□□ 0.56
SHARPIN-208ENST00000533948 SCARF1Q14162 830 aa18.54■□□□□ 0.56
SHARPIN-208ENST00000533948 MOB2Q70IA6 237 aa18.54■□□□□ 0.56
SHARPIN-208ENST00000533948 CTU1Q7Z7A3 348 aaKnown RBP18.54■□□□□ 0.56
SHARPIN-208ENST00000533948 ZBTB38Q8NAP3 1195 aaPredicted RBP18.54■□□□□ 0.56
SHARPIN-208ENST00000533948 PODXL2Q9NZ53 605 aa18.54■□□□□ 0.56
SHARPIN-208ENST00000533948 GGA1Q9UJY5 639 aa18.54■□□□□ 0.56
SHARPIN-208ENST00000533948 ZNF280AP59817 542 aaPredicted RBP18.53■□□□□ 0.56
SHARPIN-208ENST00000533948 GOLGA2Q08379 1002 aa18.53■□□□□ 0.56
SHARPIN-208ENST00000533948 CCDC152Q4G0S7 254 aa18.52■□□□□ 0.56
SHARPIN-208ENST00000533948 RSBN1LQ6PCB5 846 aaPredicted RBP18.52■□□□□ 0.56
SHARPIN-208ENST00000533948 REM2Q8IYK8 340 aaPredicted RBP18.52■□□□□ 0.56
SHARPIN-208ENST00000533948 JARID2Q92833 1246 aaPredicted RBP18.52■□□□□ 0.56
SHARPIN-208ENST00000533948 CCDC85AQ96PX6 553 aaPredicted RBP18.52■□□□□ 0.56
SHARPIN-208ENST00000533948 PAPPA2Q9BXP8 1791 aa18.52■□□□□ 0.55
SHARPIN-208ENST00000533948 PSME4Q14997 1843 aa18.51■□□□□ 0.55
SHARPIN-208ENST00000533948 AGBL3Q8NEM8 1001 aa18.51■□□□□ 0.55
SHARPIN-208ENST00000533948 HPS5Q9UPZ3 1129 aa18.51■□□□□ 0.55
SHARPIN-208ENST00000533948 PRAMEF18Q5VWM3 479 aa18.5■□□□□ 0.55
SHARPIN-208ENST00000533948 GMLQ99445 158 aa18.5■□□□□ 0.55
SHARPIN-208ENST00000533948 ZNF609O15014 1411 aa18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 WTIPA6NIX2 430 aaPredicted RBP18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 UBE2Q2LH0YL09 131 aa18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 PDE8AO60658 829 aa18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 TBC1D8O95759 1140 aa18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 CCDC191Q8NCU4 936 aa18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 MYD88Q99836 296 aa18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 CHMP4AQ9BY43 222 aa18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 PHAXQ9H814 394 aaKnown RBP18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 MYOZ2Q9NPC6 264 aa18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 MBIPQ9NS73 344 aa18.49■□□□□ 0.55
SHARPIN-208ENST00000533948 PCCAP05165 728 aaPredicted RBP18.48■□□□□ 0.55
SHARPIN-208ENST00000533948 USP17L8P0C7I0 530 aa18.48■□□□□ 0.55
SHARPIN-208ENST00000533948 FKBP1BP68106 108 aa18.48■□□□□ 0.55
SHARPIN-208ENST00000533948 ANKRD18AQ8IVF6 992 aa18.48■□□□□ 0.55
SHARPIN-208ENST00000533948 ZNF296Q8WUU4 475 aaPredicted RBP18.48■□□□□ 0.55
SHARPIN-208ENST00000533948 DDX58O95786 925 aaKnown RBP18.47■□□□□ 0.55
SHARPIN-208ENST00000533948 ATP2B4P23634 1241 aa18.47■□□□□ 0.55
SHARPIN-208ENST00000533948 CALD1Q05682 793 aaKnown RBP18.47■□□□□ 0.55
SHARPIN-208ENST00000533948 MKRN3Q13064 507 aaKnown RBP18.47■□□□□ 0.55
SHARPIN-208ENST00000533948 PRPF38BQ5VTL8 546 aaKnown RBP18.47■□□□□ 0.55
SHARPIN-208ENST00000533948 PODNQ7Z5L7 613 aa18.47■□□□□ 0.55
SHARPIN-208ENST00000533948 MXD3Q9BW11 206 aa18.47■□□□□ 0.55
SHARPIN-208ENST00000533948 CWC25Q9NXE8 425 aaPredicted RBP18.47■□□□□ 0.55
SHARPIN-208ENST00000533948 USP17L3A6NCW0 530 aa18.46■□□□□ 0.55
SHARPIN-208ENST00000533948 USP17L4A6NCW7 530 aa18.46■□□□□ 0.55
SHARPIN-208ENST00000533948 ZNF316A6NFI3 1004 aaPredicted RBP18.46■□□□□ 0.55
SHARPIN-208ENST00000533948 ELL2O00472 640 aaPredicted RBP18.46■□□□□ 0.55
SHARPIN-208ENST00000533948 NBPF9Q3BBW0 867 aa18.46■□□□□ 0.55
SHARPIN-208ENST00000533948 USP17L1Q7RTZ2 530 aa18.46■□□□□ 0.55
SHARPIN-208ENST00000533948 HDAC9Q9UKV0 1011 aa18.46■□□□□ 0.55
SHARPIN-208ENST00000533948 PITPNM2Q9BZ72 1349 aa18.46■□□□□ 0.55
SHARPIN-208ENST00000533948 APAF1O14727 1248 aa18.45■□□□□ 0.54
SHARPIN-208ENST00000533948 GNAI1P63096 354 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms