RNA–Protein interactions for RNA: ENST00000533789.5

HIF3A-216, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-216ENST00000533789 PSMD14O00487 310 aa23.6■■□□□ 1.37
HIF3A-216ENST00000533789 VEGFBP49765 207 aa23.6■■□□□ 1.37
HIF3A-216ENST00000533789 COL13A1Q5TAT6 717 aaPredicted RBP23.6■■□□□ 1.37
HIF3A-216ENST00000533789 ANKRD18AQ8IVF6 992 aa23.6■■□□□ 1.37
HIF3A-216ENST00000533789 ANKIB1Q9P2G1 1089 aa23.6■■□□□ 1.37
HIF3A-216ENST00000533789 RTL9Q8NET4 1388 aa23.6■■□□□ 1.37
HIF3A-216ENST00000533789 UFL1O94874 794 aa23.59■■□□□ 1.37
HIF3A-216ENST00000533789 GPR101Q96P66 508 aaPredicted RBP23.59■■□□□ 1.37
HIF3A-216ENST00000533789 CNOT7Q9UIV1 285 aaKnown RBP23.59■■□□□ 1.37
HIF3A-216ENST00000533789 GGA1Q9UJY5 639 aa23.59■■□□□ 1.37
HIF3A-216ENST00000533789 ABT1Q9ULW3 272 aaKnown RBP23.59■■□□□ 1.37
HIF3A-216ENST00000533789 FMR1Q06787 632 aaKnown RBP eCLIP23.58■■□□□ 1.37
HIF3A-216ENST00000533789 MICALL2Q8IY33 904 aa23.58■■□□□ 1.37
HIF3A-216ENST00000533789 TRPM4Q8TD43 1214 aa23.58■■□□□ 1.37
HIF3A-216ENST00000533789 DPF2Q92785 391 aa23.58■■□□□ 1.37
HIF3A-216ENST00000533789 CDC5LQ99459 802 aaKnown RBP23.58■■□□□ 1.37
HIF3A-216ENST00000533789 PGAP2Q9UHJ9 254 aa23.58■■□□□ 1.37
HIF3A-216ENST00000533789 XDHP47989 1333 aa23.58■■□□□ 1.36
HIF3A-216ENST00000533789 SHTN1A0MZ66 631 aa23.57■■□□□ 1.36
HIF3A-216ENST00000533789 TRAF5O00463 557 aa23.57■■□□□ 1.36
HIF3A-216ENST00000533789 VAMP4O75379 141 aa23.57■■□□□ 1.36
HIF3A-216ENST00000533789 EXOSC9Q06265 439 aaKnown RBP23.57■■□□□ 1.36
HIF3A-216ENST00000533789 FKBP5Q13451 457 aaPredicted RBP23.57■■□□□ 1.36
HIF3A-216ENST00000533789 DOK7Q18PE1 504 aa23.57■■□□□ 1.36
HIF3A-216ENST00000533789 DEFB115Q30KQ5 88 aa23.57■■□□□ 1.36
HIF3A-216ENST00000533789 UBE3BQ7Z3V4 1068 aa23.57■■□□□ 1.36
HIF3A-216ENST00000533789 TTLL11Q8NHH1 800 aa23.57■■□□□ 1.36
HIF3A-216ENST00000533789 ZC3H15Q8WU90 426 aaKnown RBP23.57■■□□□ 1.36
HIF3A-216ENST00000533789 ZC3H12CQ9C0D7 883 aaKnown RBP23.57■■□□□ 1.36
HIF3A-216ENST00000533789 ZBTB12Q9Y330 459 aaPredicted RBP23.57■■□□□ 1.36
HIF3A-216ENST00000533789 ZNF609O15014 1411 aa23.57■■□□□ 1.36
HIF3A-216ENST00000533789 H7C1D1 291 aa23.56■■□□□ 1.36
HIF3A-216ENST00000533789 H7C1W4 665 aa23.56■■□□□ 1.36
HIF3A-216ENST00000533789 RPS12P25398 132 aaKnown RBP23.56■■□□□ 1.36
HIF3A-216ENST00000533789 HIRAP54198 1017 aaPredicted RBP23.56■■□□□ 1.36
HIF3A-216ENST00000533789 FAM9BQ8IZU0 186 aa23.56■■□□□ 1.36
HIF3A-216ENST00000533789 DNAAF4Q8WXU2 420 aa23.56■■□□□ 1.36
HIF3A-216ENST00000533789 GCKRQ14397 625 aa23.55■■□□□ 1.36
HIF3A-216ENST00000533789 GREM2Q9H772 168 aa23.55■■□□□ 1.36
HIF3A-216ENST00000533789 CST9Q5W186 159 aa23.54■■□□□ 1.36
HIF3A-216ENST00000533789 MYH16Q9H6N6 1097 aa23.54■■□□□ 1.36
HIF3A-216ENST00000533789 SPINK5Q9NQ38 1064 aaPredicted RBP23.54■■□□□ 1.36
HIF3A-216ENST00000533789 KCNQ5Q9NR82 932 aa23.54■■□□□ 1.36
HIF3A-216ENST00000533789 LINS1Q8NG48 757 aa23.53■■□□□ 1.36
HIF3A-216ENST00000533789 PLA2G12BQ9BX93 195 aa23.53■■□□□ 1.36
HIF3A-216ENST00000533789 GLIS2Q9BZE0 524 aaPredicted RBP23.53■■□□□ 1.36
HIF3A-216ENST00000533789 BSDC1Q9NW68 430 aaPredicted RBP23.53■■□□□ 1.36
HIF3A-216ENST00000533789 WDR33Q9C0J8 1336 aaKnown RBP23.53■■□□□ 1.36
HIF3A-216ENST00000533789 G3V3G9 751 aa23.52■■□□□ 1.36
HIF3A-216ENST00000533789 ATP2B4P23634 1241 aa23.52■■□□□ 1.36
HIF3A-216ENST00000533789 DCAF8Q5TAQ9 597 aa23.52■■□□□ 1.36
HIF3A-216ENST00000533789 TLL2Q9Y6L7 1015 aa23.52■■□□□ 1.36
HIF3A-216ENST00000533789 MED23Q9ULK4 1368 aa23.52■■□□□ 1.36
HIF3A-216ENST00000533789 VIL1P09327 827 aaKnown RBP23.51■■□□□ 1.35
HIF3A-216ENST00000533789 CASP7P55210 303 aa23.51■■□□□ 1.35
HIF3A-216ENST00000533789 SAMD7Q7Z3H4 446 aa23.51■■□□□ 1.35
HIF3A-216ENST00000533789 ECM29Q5VYK3 1845 aa23.51■■□□□ 1.35
HIF3A-216ENST00000533789 FOXN1O15353 648 aa23.5■■□□□ 1.35
HIF3A-216ENST00000533789 CELF2O95319 508 aaKnown RBP23.5■■□□□ 1.35
HIF3A-216ENST00000533789 CDC37L1Q7L3B6 337 aa23.5■■□□□ 1.35
HIF3A-216ENST00000533789 TNS4Q8IZW8 715 aa23.5■■□□□ 1.35
HIF3A-216ENST00000533789 AIDAQ96BJ3 306 aa23.5■■□□□ 1.35
HIF3A-216ENST00000533789 MINPP1Q9UNW1 487 aa23.5■■□□□ 1.35
HIF3A-216ENST00000533789 TBC1D10BQ4KMP7 808 aaPredicted RBP23.49■■□□□ 1.35
HIF3A-216ENST00000533789 WBP1LQ9NX94 342 aa23.49■■□□□ 1.35
HIF3A-216ENST00000533789 EGFRP00533 1210 aa23.48■■□□□ 1.35
HIF3A-216ENST00000533789 IGHMBP2P38935 993 aaKnown RBP23.48■■□□□ 1.35
HIF3A-216ENST00000533789 ECE1P42892 770 aa23.48■■□□□ 1.35
HIF3A-216ENST00000533789 PAXIP1Q6ZW49 1069 aaPredicted RBP23.48■■□□□ 1.35
HIF3A-216ENST00000533789 CAPNS2Q96L46 248 aa23.48■■□□□ 1.35
HIF3A-216ENST00000533789 ITGA6P23229 1130 aa23.47■■□□□ 1.35
HIF3A-216ENST00000533789 KIF4BQ2VIQ3 1234 aa23.47■■□□□ 1.35
HIF3A-216ENST00000533789 FAM161AQ3B820 660 aa23.47■■□□□ 1.35
HIF3A-216ENST00000533789 SAPCD2Q86UD0 394 aa23.47■■□□□ 1.35
HIF3A-216ENST00000533789 ZNF521Q96K83 1311 aa23.47■■□□□ 1.35
HIF3A-216ENST00000533789 AKAP11Q9UKA4 1901 aa23.47■■□□□ 1.35
HIF3A-216ENST00000533789 F6X3S4 739 aa23.46■■□□□ 1.35
HIF3A-216ENST00000533789 CSF1RP07333 972 aa23.46■■□□□ 1.35
HIF3A-216ENST00000533789 CCT4P50991 539 aaKnown RBP23.46■■□□□ 1.35
HIF3A-216ENST00000533789 CYP4F22Q6NT55 531 aa23.46■■□□□ 1.35
HIF3A-216ENST00000533789 RSBN1LQ6PCB5 846 aaPredicted RBP23.46■■□□□ 1.35
HIF3A-216ENST00000533789 PODNQ7Z5L7 613 aa23.46■■□□□ 1.35
HIF3A-216ENST00000533789 AGBL3Q8NEM8 1001 aa23.46■■□□□ 1.35
HIF3A-216ENST00000533789 CTCFP49711 727 aaPredicted RBP23.45■■□□□ 1.34
HIF3A-216ENST00000533789 MAP2K1Q02750 393 aaPredicted RBP23.45■■□□□ 1.34
HIF3A-216ENST00000533789 BEND3Q5T5X7 828 aa23.45■■□□□ 1.34
HIF3A-216ENST00000533789 HHIPL1Q96JK4 782 aa23.45■■□□□ 1.34
HIF3A-216ENST00000533789 ZNF408Q9H9D4 720 aa23.45■■□□□ 1.34
HIF3A-216ENST00000533789 WTIPA6NIX2 430 aaPredicted RBP23.44■■□□□ 1.34
HIF3A-216ENST00000533789 RBM26Q5T8P6 1007 aaKnown RBP23.44■■□□□ 1.34
HIF3A-216ENST00000533789 KRT26Q7Z3Y9 468 aa23.44■■□□□ 1.34
HIF3A-216ENST00000533789 USP48Q86UV5 1035 aa23.44■■□□□ 1.34
HIF3A-216ENST00000533789 PRDM10Q9NQV6 1147 aa23.44■■□□□ 1.34
HIF3A-216ENST00000533789 ARAP2Q8WZ64 1704 aa23.43■■□□□ 1.34
HIF3A-216ENST00000533789 USP17L3A6NCW0 530 aa23.43■■□□□ 1.34
HIF3A-216ENST00000533789 USP17L4A6NCW7 530 aa23.43■■□□□ 1.34
HIF3A-216ENST00000533789 ZNF280AP59817 542 aaPredicted RBP23.43■■□□□ 1.34
HIF3A-216ENST00000533789 GRM1Q13255 1194 aa23.43■■□□□ 1.34
HIF3A-216ENST00000533789 USP17L1Q7RTZ2 530 aa23.43■■□□□ 1.34
HIF3A-216ENST00000533789 DCPSQ96C86 337 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms