RNA–Protein interactions for RNA: ENST00000533752.1

TSKU-204, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-204ENST00000533752 CHMP3Q9Y3E7 222 aa19.95■□□□□ 0.78
TSKU-204ENST00000533752 UFL1O94874 794 aa19.94■□□□□ 0.78
TSKU-204ENST00000533752 TBC1D16Q8TBP0 767 aa19.94■□□□□ 0.78
TSKU-204ENST00000533752 NBPF7P0C2Y1 421 aaPredicted RBP19.93■□□□□ 0.78
TSKU-204ENST00000533752 CCDC57Q2TAC2 916 aa19.93■□□□□ 0.78
TSKU-204ENST00000533752 LMBR1LQ6UX01 489 aa19.93■□□□□ 0.78
TSKU-204ENST00000533752 RBM46Q8TBY0 533 aaKnown RBP19.93■□□□□ 0.78
TSKU-204ENST00000533752 POLLQ9UGP5 575 aa19.93■□□□□ 0.78
TSKU-204ENST00000533752 ATP2B4P23634 1241 aa19.92■□□□□ 0.78
TSKU-204ENST00000533752 EPHA10Q5JZY3 1008 aa19.92■□□□□ 0.78
TSKU-204ENST00000533752 SUCLG2Q96I99 432 aa19.92■□□□□ 0.78
TSKU-204ENST00000533752 ANKRD2Q9GZV1 360 aa19.92■□□□□ 0.78
TSKU-204ENST00000533752 MINPP1Q9UNW1 487 aa19.92■□□□□ 0.78
TSKU-204ENST00000533752 HDAC5Q9UQL6 1122 aa19.92■□□□□ 0.78
TSKU-204ENST00000533752 SCN4AP35499 1836 aa19.91■□□□□ 0.78
TSKU-204ENST00000533752 SPEF2Q9C093 1822 aa19.91■□□□□ 0.78
TSKU-204ENST00000533752 TAF7LQ5H9L4 462 aa19.91■□□□□ 0.78
TSKU-204ENST00000533752 ZC3H12CQ9C0D7 883 aaKnown RBP19.91■□□□□ 0.78
TSKU-204ENST00000533752 USP44Q9H0E7 712 aa19.91■□□□□ 0.78
TSKU-204ENST00000533752 FSTL1Q12841 308 aa19.9■□□□□ 0.78
TSKU-204ENST00000533752 RABL6Q3YEC7 729 aaPredicted RBP19.9■□□□□ 0.78
TSKU-204ENST00000533752 ATF7IPQ6VMQ6 1270 aa19.9■□□□□ 0.78
TSKU-204ENST00000533752 HACL1Q9UJ83 578 aa19.9■□□□□ 0.78
TSKU-204ENST00000533752 GJA3Q9Y6H8 435 aa19.9■□□□□ 0.78
TSKU-204ENST00000533752 POTECB2RU33 542 aa19.89■□□□□ 0.77
TSKU-204ENST00000533752 BCAR3O75815 825 aa19.89■□□□□ 0.77
TSKU-204ENST00000533752 LMOD1P29536 600 aaPredicted RBP19.89■□□□□ 0.77
TSKU-204ENST00000533752 TNIP1Q15025 636 aa19.89■□□□□ 0.77
TSKU-204ENST00000533752 SMC1BQ8NDV3 1235 aa19.89■□□□□ 0.77
TSKU-204ENST00000533752 FRAT1Q92837 279 aaPredicted RBP19.89■□□□□ 0.77
TSKU-204ENST00000533752 KAZALD1Q96I82 304 aa19.89■□□□□ 0.77
TSKU-204ENST00000533752 BICC1Q9H694 974 aaKnown RBP19.89■□□□□ 0.77
TSKU-204ENST00000533752 LEMD3Q9Y2U8 911 aa19.89■□□□□ 0.77
TSKU-204ENST00000533752 MED23Q9ULK4 1368 aa19.88■□□□□ 0.77
TSKU-204ENST00000533752 G3V3G9 751 aa19.88■□□□□ 0.77
TSKU-204ENST00000533752 RIMBP2O15034 1052 aa19.88■□□□□ 0.77
TSKU-204ENST00000533752 UBTFL1P0CB47 393 aaPredicted RBP19.88■□□□□ 0.77
TSKU-204ENST00000533752 TRIM27P14373 513 aa19.88■□□□□ 0.77
TSKU-204ENST00000533752 DCAF8Q5TAQ9 597 aa19.88■□□□□ 0.77
TSKU-204ENST00000533752 ZKSCAN2Q63HK3 967 aa19.88■□□□□ 0.77
TSKU-204ENST00000533752 INTS3Q68E01 1043 aaKnown RBP19.88■□□□□ 0.77
TSKU-204ENST00000533752 CIAPIN1Q6FI81 312 aa19.88■□□□□ 0.77
TSKU-204ENST00000533752 ECE2O60344 883 aa19.87■□□□□ 0.77
TSKU-204ENST00000533752 CXCL9Q07325 125 aa19.87■□□□□ 0.77
TSKU-204ENST00000533752 KCNJ4P48050 445 aa19.86■□□□□ 0.77
TSKU-204ENST00000533752 CHRNDQ07001 517 aa19.86■□□□□ 0.77
TSKU-204ENST00000533752 LDHAL6AQ6ZMR3 332 aa19.86■□□□□ 0.77
TSKU-204ENST00000533752 PNMA8AQ86V59 439 aaPredicted RBP19.86■□□□□ 0.77
TSKU-204ENST00000533752 ANKRD44Q8N8A2 993 aa19.86■□□□□ 0.77
TSKU-204ENST00000533752 GPR101Q96P66 508 aaPredicted RBP19.86■□□□□ 0.77
TSKU-204ENST00000533752 TAF1DQ9H5J8 278 aaPredicted RBP19.86■□□□□ 0.77
TSKU-204ENST00000533752 DBNDD1Q9H9R9 158 aa19.86■□□□□ 0.77
TSKU-204ENST00000533752 CNNM1Q9NRU3 951 aa19.86■□□□□ 0.77
TSKU-204ENST00000533752 YDJCA8MPS7 323 aa19.85■□□□□ 0.77
TSKU-204ENST00000533752 RAD17O75943 681 aa19.85■□□□□ 0.77
TSKU-204ENST00000533752 EPHX2P34913 555 aa19.85■□□□□ 0.77
TSKU-204ENST00000533752 ZNF804BA4D1E1 1349 aa19.84■□□□□ 0.77
TSKU-204ENST00000533752 GNAI3P08754 354 aa19.84■□□□□ 0.77
TSKU-204ENST00000533752 SCNN1DP51172 638 aa19.84■□□□□ 0.77
TSKU-204ENST00000533752 DOK7Q18PE1 504 aa19.84■□□□□ 0.77
TSKU-204ENST00000533752 LDHDQ86WU2 507 aa19.84■□□□□ 0.77
TSKU-204ENST00000533752 HSPA6P17066 643 aa19.83■□□□□ 0.77
TSKU-204ENST00000533752 FTSJ3Q8IY81 847 aaKnown RBP19.83■□□□□ 0.77
TSKU-204ENST00000533752 ZNF594Q96JF6 807 aaPredicted RBP19.83■□□□□ 0.77
TSKU-204ENST00000533752 RPS12P25398 132 aaKnown RBP19.82■□□□□ 0.76
TSKU-204ENST00000533752 GMPSP49915 693 aaPredicted RBP19.82■□□□□ 0.76
TSKU-204ENST00000533752 PODNQ7Z5L7 613 aa19.82■□□□□ 0.76
TSKU-204ENST00000533752 GPRC5DQ9NZD1 345 aa19.82■□□□□ 0.76
TSKU-204ENST00000533752 MROH5Q6ZUA9 1318 aa19.81■□□□□ 0.76
TSKU-204ENST00000533752 EAPPQ56P03 285 aaPredicted RBP19.81■□□□□ 0.76
TSKU-204ENST00000533752 CHADLQ6NUI6 762 aa19.81■□□□□ 0.76
TSKU-204ENST00000533752 MEIS3Q99687 375 aa19.81■□□□□ 0.76
TSKU-204ENST00000533752 COA1Q9GZY4 146 aa19.81■□□□□ 0.76
TSKU-204ENST00000533752 ZNF609O15014 1411 aa19.8■□□□□ 0.76
TSKU-204ENST00000533752 PSMD14O00487 310 aa19.8■□□□□ 0.76
TSKU-204ENST00000533752 C15orf52Q6ZUT6 534 aaKnown RBP19.8■□□□□ 0.76
TSKU-204ENST00000533752 DPF2Q92785 391 aa19.8■□□□□ 0.76
TSKU-204ENST00000533752 CLUAP1Q96AJ1 413 aa19.8■□□□□ 0.76
TSKU-204ENST00000533752 ADARB2Q9NS39 739 aaKnown RBP19.8■□□□□ 0.76
TSKU-204ENST00000533752 LRRFIP2Q9Y608 721 aaKnown RBP19.8■□□□□ 0.76
TSKU-204ENST00000533752 A0A1B0GUL6 1792 aa19.8■□□□□ 0.76
TSKU-204ENST00000533752 USP50Q70EL3 339 aaPredicted RBP19.79■□□□□ 0.76
TSKU-204ENST00000533752 TAF5LO75529 589 aa19.78■□□□□ 0.76
TSKU-204ENST00000533752 VIL1P09327 827 aaKnown RBP19.78■□□□□ 0.76
TSKU-204ENST00000533752 MS4A1P11836 297 aa19.78■□□□□ 0.76
TSKU-204ENST00000533752 EPS15P42566 896 aa19.78■□□□□ 0.76
TSKU-204ENST00000533752 APLP1P51693 650 aa19.78■□□□□ 0.76
TSKU-204ENST00000533752 DZIP1LQ8IYY4 767 aaKnown RBP19.78■□□□□ 0.76
TSKU-204ENST00000533752 HELBQ8NG08 1087 aaPredicted RBP19.78■□□□□ 0.76
TSKU-204ENST00000533752 FBXO3Q9UK99 471 aa19.78■□□□□ 0.76
TSKU-204ENST00000533752 RIPOR2Q9Y4F9 1068 aa19.78■□□□□ 0.76
TSKU-204ENST00000533752 ADAMTSL1Q8N6G6 1762 aa19.78■□□□□ 0.76
TSKU-204ENST00000533752 USP17L3A6NCW0 530 aa19.77■□□□□ 0.76
TSKU-204ENST00000533752 USP17L4A6NCW7 530 aa19.77■□□□□ 0.76
TSKU-204ENST00000533752 WTIPA6NIX2 430 aaPredicted RBP19.77■□□□□ 0.76
TSKU-204ENST00000533752 H7C1D1 291 aa19.77■□□□□ 0.76
TSKU-204ENST00000533752 UBE4AQ14139 1066 aa19.77■□□□□ 0.76
TSKU-204ENST00000533752 USP17L1Q7RTZ2 530 aa19.77■□□□□ 0.76
TSKU-204ENST00000533752 ZNF804AQ7Z570 1209 aa19.77■□□□□ 0.76
TSKU-204ENST00000533752 TMEM57Q8N5G2 664 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms