RNA–Protein interactions for RNA: ENST00000533666.5

CMTM1-217, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-217ENST00000533666 PNMA6EA0A0J9YXQ4 647 aa17.47■□□□□ 0.39
CMTM1-217ENST00000533666 EYA2O00167 538 aa17.47■□□□□ 0.39
CMTM1-217ENST00000533666 IL15P40933 162 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-217ENST00000533666 RFX5P48382 616 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-217ENST00000533666 IRX6P78412 446 aaPredicted RBP17.47■□□□□ 0.39
CMTM1-217ENST00000533666 PTPN12Q05209 780 aaKnown RBP17.47■□□□□ 0.39
CMTM1-217ENST00000533666 POLA2Q14181 598 aa17.47■□□□□ 0.39
CMTM1-217ENST00000533666 ARHGAP27Q6ZUM4 889 aa17.47■□□□□ 0.39
CMTM1-217ENST00000533666 MINPP1Q9UNW1 487 aa17.47■□□□□ 0.39
CMTM1-217ENST00000533666 NSFL1CQ9UNZ2 370 aaKnown RBP17.47■□□□□ 0.39
CMTM1-217ENST00000533666 GOLGB1Q14789 3259 aaKnown RBP17.47■□□□□ 0.39
CMTM1-217ENST00000533666 XDHP47989 1333 aa17.47■□□□□ 0.39
CMTM1-217ENST00000533666 KCNJ4P48050 445 aa17.46■□□□□ 0.39
CMTM1-217ENST00000533666 OS9Q13438 667 aaPredicted RBP17.46■□□□□ 0.39
CMTM1-217ENST00000533666 TAOK3Q9H2K8 898 aa17.46■□□□□ 0.39
CMTM1-217ENST00000533666 SPEF2Q9C093 1822 aa17.46■□□□□ 0.39
CMTM1-217ENST00000533666 SURF6O75683 361 aaKnown RBP17.45■□□□□ 0.38
CMTM1-217ENST00000533666 YBX3P16989 372 aaKnown RBP eCLIP17.45■□□□□ 0.38
CMTM1-217ENST00000533666 ATP2B4P23634 1241 aa17.45■□□□□ 0.38
CMTM1-217ENST00000533666 METTL24Q5JXM2 366 aa17.45■□□□□ 0.38
CMTM1-217ENST00000533666 ERC1Q8IUD2 1116 aa17.45■□□□□ 0.38
CMTM1-217ENST00000533666 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
CMTM1-217ENST00000533666 PSMD1Q99460 953 aa17.45■□□□□ 0.38
CMTM1-217ENST00000533666 SIL1Q9H173 461 aa17.45■□□□□ 0.38
CMTM1-217ENST00000533666 PODXL2Q9NZ53 605 aa17.45■□□□□ 0.38
CMTM1-217ENST00000533666 GGA1Q9UJY5 639 aa17.45■□□□□ 0.38
CMTM1-217ENST00000533666 FKBP4Q02790 459 aaKnown RBP eCLIP17.44■□□□□ 0.38
CMTM1-217ENST00000533666 CHRNDQ07001 517 aa17.44■□□□□ 0.38
CMTM1-217ENST00000533666 EYA3Q99504 573 aa17.44■□□□□ 0.38
CMTM1-217ENST00000533666 VPS33BQ9H267 617 aa17.44■□□□□ 0.38
CMTM1-217ENST00000533666 CEP126Q9P2H0 1117 aa17.44■□□□□ 0.38
CMTM1-217ENST00000533666 LEMD3Q9Y2U8 911 aa17.44■□□□□ 0.38
CMTM1-217ENST00000533666 RIPOR2Q9Y4F9 1068 aa17.44■□□□□ 0.38
CMTM1-217ENST00000533666 LTBP3Q9NS15 1303 aa17.44■□□□□ 0.38
CMTM1-217ENST00000533666 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
CMTM1-217ENST00000533666 C6orf229H3BNL8 230 aa17.43■□□□□ 0.38
CMTM1-217ENST00000533666 GPSM2P81274 684 aa17.43■□□□□ 0.38
CMTM1-217ENST00000533666 RWDD1Q9H446 243 aaPredicted RBP17.43■□□□□ 0.38
CMTM1-217ENST00000533666 PA2G4Q9UQ80 394 aaKnown RBP17.43■□□□□ 0.38
CMTM1-217ENST00000533666 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
CMTM1-217ENST00000533666 UFL1O94874 794 aa17.42■□□□□ 0.38
CMTM1-217ENST00000533666 LRRC24Q50LG9 513 aa17.42■□□□□ 0.38
CMTM1-217ENST00000533666 OLFM4Q6UX06 510 aa17.42■□□□□ 0.38
CMTM1-217ENST00000533666 RTFDC1Q9BY42 306 aaPredicted RBP17.42■□□□□ 0.38
CMTM1-217ENST00000533666 PUS3Q9BZE2 481 aaKnown RBP17.42■□□□□ 0.38
CMTM1-217ENST00000533666 AKAP2Q9Y2D5 859 aa17.42■□□□□ 0.38
CMTM1-217ENST00000533666 PCDHB15Q9Y5E8 787 aa17.42■□□□□ 0.38
CMTM1-217ENST00000533666 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
CMTM1-217ENST00000533666 ERICH6BQ5W0A0 696 aa17.41■□□□□ 0.38
CMTM1-217ENST00000533666 SIRT2Q8IXJ6 389 aa17.41■□□□□ 0.38
CMTM1-217ENST00000533666 FER1L6Q2WGJ9 1857 aa17.41■□□□□ 0.38
CMTM1-217ENST00000533666 PDE8BO95263 885 aa17.4■□□□□ 0.38
CMTM1-217ENST00000533666 LMNB1P20700 586 aa17.4■□□□□ 0.38
CMTM1-217ENST00000533666 HDAC1Q13547 482 aaPredicted RBP17.4■□□□□ 0.38
CMTM1-217ENST00000533666 UBE4AQ14139 1066 aa17.4■□□□□ 0.38
CMTM1-217ENST00000533666 PUM3Q15397 648 aaKnown RBP17.4■□□□□ 0.38
CMTM1-217ENST00000533666 ATG9AQ7Z3C6 839 aa17.4■□□□□ 0.38
CMTM1-217ENST00000533666 TBC1D16Q8TBP0 767 aa17.4■□□□□ 0.38
CMTM1-217ENST00000533666 ZC3H12CQ9C0D7 883 aaKnown RBP17.4■□□□□ 0.38
CMTM1-217ENST00000533666 ZBTB47Q9UFB7 747 aaPredicted RBP17.4■□□□□ 0.38
CMTM1-217ENST00000533666 ZNF804BA4D1E1 1349 aa17.4■□□□□ 0.38
CMTM1-217ENST00000533666 COL4A1P02462 1669 aa17.39■□□□□ 0.37
CMTM1-217ENST00000533666 G3V3G9 751 aa17.39■□□□□ 0.37
CMTM1-217ENST00000533666 NFKBIEO00221 500 aa17.39■□□□□ 0.37
CMTM1-217ENST00000533666 WASHC4Q2M389 1173 aa17.39■□□□□ 0.37
CMTM1-217ENST00000533666 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
CMTM1-217ENST00000533666 HELBQ8NG08 1087 aaPredicted RBP17.39■□□□□ 0.37
CMTM1-217ENST00000533666 TAF5LO75529 589 aa17.38■□□□□ 0.37
CMTM1-217ENST00000533666 IFIT1P09914 478 aaKnown RBP17.38■□□□□ 0.37
CMTM1-217ENST00000533666 SLC5A1P13866 664 aa17.38■□□□□ 0.37
CMTM1-217ENST00000533666 JDP2Q8WYK2 163 aa17.38■□□□□ 0.37
CMTM1-217ENST00000533666 KIF1BPQ96EK5 621 aa17.38■□□□□ 0.37
CMTM1-217ENST00000533666 POLLQ9UGP5 575 aa17.38■□□□□ 0.37
CMTM1-217ENST00000533666 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
CMTM1-217ENST00000533666 PPIP5K2O43314 1243 aa17.37■□□□□ 0.37
CMTM1-217ENST00000533666 IARSP41252 1262 aaKnown RBP17.37■□□□□ 0.37
CMTM1-217ENST00000533666 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
CMTM1-217ENST00000533666 LPIN2Q92539 896 aa17.37■□□□□ 0.37
CMTM1-217ENST00000533666 GCC1Q96CN9 775 aa17.37■□□□□ 0.37
CMTM1-217ENST00000533666 DCTPP1Q9H773 170 aa17.37■□□□□ 0.37
CMTM1-217ENST00000533666 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
CMTM1-217ENST00000533666 SNED1Q8TER0 1413 aa17.37■□□□□ 0.37
CMTM1-217ENST00000533666 RASSF7Q02833 373 aa17.36■□□□□ 0.37
CMTM1-217ENST00000533666 KIAA2012Q0VF49 1180 aa17.36■□□□□ 0.37
CMTM1-217ENST00000533666 TFCP2Q12800 502 aa17.36■□□□□ 0.37
CMTM1-217ENST00000533666 ATP2B3Q16720 1220 aa17.36■□□□□ 0.37
CMTM1-217ENST00000533666 CAVIN4Q5BKX8 364 aa17.36■□□□□ 0.37
CMTM1-217ENST00000533666 VGLL2Q8N8G2 317 aa17.36■□□□□ 0.37
CMTM1-217ENST00000533666 GPR108Q9NPR9 543 aa17.36■□□□□ 0.37
CMTM1-217ENST00000533666 MED23Q9ULK4 1368 aa17.36■□□□□ 0.37
CMTM1-217ENST00000533666 C15orf52Q6ZUT6 534 aaKnown RBP17.35■□□□□ 0.37
CMTM1-217ENST00000533666 ZNF804AQ7Z570 1209 aa17.35■□□□□ 0.37
CMTM1-217ENST00000533666 VPS37DQ86XT2 251 aa17.35■□□□□ 0.37
CMTM1-217ENST00000533666 NIM1KQ8IY84 436 aa17.35■□□□□ 0.37
CMTM1-217ENST00000533666 CLASRPQ8N2M8 674 aaKnown RBP17.35■□□□□ 0.37
CMTM1-217ENST00000533666 LRRCC1Q9C099 1032 aa17.35■□□□□ 0.37
CMTM1-217ENST00000533666 LTBP1Q14766 1721 aa17.35■□□□□ 0.37
CMTM1-217ENST00000533666 A0A1B0GUL6 1792 aa17.34■□□□□ 0.37
CMTM1-217ENST00000533666 APBB1O00213 710 aa17.34■□□□□ 0.37
CMTM1-217ENST00000533666 RIMBP2O15034 1052 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms