RNA–Protein interactions for RNA: ENST00000533656.1

VPS51-212, Transcript of VPS51, GARP complex subunit, humanhuman

TSL 2

Gene VPS51, Length 923 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS51-212ENST00000533656 RFX5P48382 616 aaPredicted RBP27.13■■□□□ 1.93
VPS51-212ENST00000533656 CCDC93Q567U6 631 aa27.13■■□□□ 1.93
VPS51-212ENST00000533656 HMMRO75330 724 aa27.12■■□□□ 1.93
VPS51-212ENST00000533656 POLA2Q14181 598 aa27.12■■□□□ 1.93
VPS51-212ENST00000533656 SSH3Q8TE77 659 aa27.12■■□□□ 1.93
VPS51-212ENST00000533656 COPRSQ9NQ92 184 aa27.12■■□□□ 1.93
VPS51-212ENST00000533656 DICER1Q9UPY3 1922 aaKnown RBP27.12■■□□□ 1.93
VPS51-212ENST00000533656 C21orf2O43822 256 aa27.11■■□□□ 1.93
VPS51-212ENST00000533656 PTPN12Q05209 780 aaKnown RBP27.11■■□□□ 1.93
VPS51-212ENST00000533656 LDHAL6AQ6ZMR3 332 aa27.11■■□□□ 1.93
VPS51-212ENST00000533656 RTKN2Q8IZC4 609 aa27.11■■□□□ 1.93
VPS51-212ENST00000533656 PNMA6EA0A0J9YXQ4 647 aa27.1■■□□□ 1.93
VPS51-212ENST00000533656 NFKBIEO00221 500 aa27.1■■□□□ 1.93
VPS51-212ENST00000533656 EXOC6Q8TAG9 804 aa27.1■■□□□ 1.93
VPS51-212ENST00000533656 NEFLP07196 543 aa27.09■■□□□ 1.93
VPS51-212ENST00000533656 CNNM1Q9NRU3 951 aa27.09■■□□□ 1.93
VPS51-212ENST00000533656 LRRC37AA6NMS7 1700 aa27.09■■□□□ 1.93
VPS51-212ENST00000533656 COL4A1P02462 1669 aa27.08■■□□□ 1.93
VPS51-212ENST00000533656 CIAO1O76071 339 aa27.08■■□□□ 1.93
VPS51-212ENST00000533656 ZNF594Q96JF6 807 aaPredicted RBP27.08■■□□□ 1.93
VPS51-212ENST00000533656 ANKRD2Q9GZV1 360 aa27.08■■□□□ 1.93
VPS51-212ENST00000533656 ZNF219Q9P2Y4 722 aaPredicted RBP27.08■■□□□ 1.93
VPS51-212ENST00000533656 MINPP1Q9UNW1 487 aa27.07■■□□□ 1.92
VPS51-212ENST00000533656 MROH5Q6ZUA9 1318 aa27.07■■□□□ 1.92
VPS51-212ENST00000533656 SNED1Q8TER0 1413 aa27.07■■□□□ 1.92
VPS51-212ENST00000533656 EYA2O00167 538 aa27.06■■□□□ 1.92
VPS51-212ENST00000533656 TOMM70O94826 608 aa27.06■■□□□ 1.92
VPS51-212ENST00000533656 IRX6P78412 446 aaPredicted RBP27.06■■□□□ 1.92
VPS51-212ENST00000533656 PODXL2Q9NZ53 605 aa27.06■■□□□ 1.92
VPS51-212ENST00000533656 XDHP47989 1333 aa27.06■■□□□ 1.92
VPS51-212ENST00000533656 LMNB1P20700 586 aa27.05■■□□□ 1.92
VPS51-212ENST00000533656 KLHDC4Q8TBB5 520 aa27.05■■□□□ 1.92
VPS51-212ENST00000533656 RIPOR2Q9Y4F9 1068 aa27.05■■□□□ 1.92
VPS51-212ENST00000533656 LTBP3Q9NS15 1303 aa27.05■■□□□ 1.92
VPS51-212ENST00000533656 WDR90Q96KV7 1748 aa27.04■■□□□ 1.92
VPS51-212ENST00000533656 TAF1P21675 1872 aa27.04■■□□□ 1.92
VPS51-212ENST00000533656 IL15P40933 162 aaPredicted RBP27.04■■□□□ 1.92
VPS51-212ENST00000533656 DPP8Q6V1X1 898 aaPredicted RBP27.04■■□□□ 1.92
VPS51-212ENST00000533656 SIRT2Q8IXJ6 389 aa27.04■■□□□ 1.92
VPS51-212ENST00000533656 MPNDQ8N594 471 aa27.04■■□□□ 1.92
VPS51-212ENST00000533656 SUPT20HQ8NEM7 779 aa27.04■■□□□ 1.92
VPS51-212ENST00000533656 PSMD1Q99460 953 aa27.04■■□□□ 1.92
VPS51-212ENST00000533656 CHRNDQ07001 517 aa27.03■■□□□ 1.92
VPS51-212ENST00000533656 HSP90AB4PQ58FF6 505 aa27.03■■□□□ 1.92
VPS51-212ENST00000533656 KDM2BQ8NHM5 1336 aa27.03■■□□□ 1.92
VPS51-212ENST00000533656 RRAGCQ9HB90 399 aa27.03■■□□□ 1.92
VPS51-212ENST00000533656 ANKIB1Q9P2G1 1089 aa27.03■■□□□ 1.92
VPS51-212ENST00000533656 PA2G4Q9UQ80 394 aaKnown RBP27.03■■□□□ 1.92
VPS51-212ENST00000533656 NOP58Q9Y2X3 529 aaKnown RBP27.03■■□□□ 1.92
VPS51-212ENST00000533656 FKBP4Q02790 459 aaKnown RBP eCLIP27.02■■□□□ 1.92
VPS51-212ENST00000533656 G3BP1Q13283 466 aaKnown RBP eCLIP27.02■■□□□ 1.92
VPS51-212ENST00000533656 RTFDC1Q9BY42 306 aaPredicted RBP27.02■■□□□ 1.92
VPS51-212ENST00000533656 PUS3Q9BZE2 481 aaKnown RBP27.02■■□□□ 1.92
VPS51-212ENST00000533656 TAOK3Q9H2K8 898 aa27.02■■□□□ 1.92
VPS51-212ENST00000533656 NSFL1CQ9UNZ2 370 aaKnown RBP27.02■■□□□ 1.92
VPS51-212ENST00000533656 PCDHB15Q9Y5E8 787 aa27.02■■□□□ 1.92
VPS51-212ENST00000533656 ATP2B4P23634 1241 aa27.01■■□□□ 1.91
VPS51-212ENST00000533656 LRRC24Q50LG9 513 aa27.01■■□□□ 1.91
VPS51-212ENST00000533656 OLFM4Q6UX06 510 aa27.01■■□□□ 1.91
VPS51-212ENST00000533656 SIL1Q9H173 461 aa27.01■■□□□ 1.91
VPS51-212ENST00000533656 VPS33BQ9H267 617 aa27.01■■□□□ 1.91
VPS51-212ENST00000533656 GGA1Q9UJY5 639 aa27.01■■□□□ 1.91
VPS51-212ENST00000533656 LEMD3Q9Y2U8 911 aa27.01■■□□□ 1.91
VPS51-212ENST00000533656 SURF6O75683 361 aaKnown RBP27■■□□□ 1.91
VPS51-212ENST00000533656 GPSM2P81274 684 aa27■■□□□ 1.91
VPS51-212ENST00000533656 METTL24Q5JXM2 366 aa27■■□□□ 1.91
VPS51-212ENST00000533656 ATG9AQ7Z3C6 839 aa27■■□□□ 1.91
VPS51-212ENST00000533656 SPEF2Q9C093 1822 aa27■■□□□ 1.91
VPS51-212ENST00000533656 ZC3H4Q9UPT8 1303 aaKnown RBP26.99■■□□□ 1.91
VPS51-212ENST00000533656 ERC1Q8IUD2 1116 aa26.99■■□□□ 1.91
VPS51-212ENST00000533656 HDAC1Q13547 482 aaPredicted RBP26.98■■□□□ 1.91
VPS51-212ENST00000533656 RBM46Q8TBY0 533 aaKnown RBP26.98■■□□□ 1.91
VPS51-212ENST00000533656 EYA3Q99504 573 aa26.98■■□□□ 1.91
VPS51-212ENST00000533656 LTBP1Q14766 1721 aa26.97■■□□□ 1.91
VPS51-212ENST00000533656 UFL1O94874 794 aa26.97■■□□□ 1.91
VPS51-212ENST00000533656 OS9Q13438 667 aaPredicted RBP26.97■■□□□ 1.91
VPS51-212ENST00000533656 TBC1D16Q8TBP0 767 aa26.97■■□□□ 1.91
VPS51-212ENST00000533656 CEP126Q9P2H0 1117 aa26.97■■□□□ 1.91
VPS51-212ENST00000533656 PDE8BO95263 885 aa26.96■■□□□ 1.91
VPS51-212ENST00000533656 KCNJ4P48050 445 aa26.96■■□□□ 1.91
VPS51-212ENST00000533656 UBE4AQ14139 1066 aa26.96■■□□□ 1.91
VPS51-212ENST00000533656 SLC51AQ86UW1 340 aa26.96■■□□□ 1.91
VPS51-212ENST00000533656 C16orf71Q8IYS4 520 aaPredicted RBP26.96■■□□□ 1.91
VPS51-212ENST00000533656 VGLL2Q8N8G2 317 aa26.96■■□□□ 1.91
VPS51-212ENST00000533656 C6orf229H3BNL8 230 aa26.95■■□□□ 1.9
VPS51-212ENST00000533656 RAB11FIP3O75154 756 aa26.95■■□□□ 1.9
VPS51-212ENST00000533656 ERICH6BQ5W0A0 696 aa26.95■■□□□ 1.9
VPS51-212ENST00000533656 DUOX1Q9NRD9 1551 aa26.95■■□□□ 1.9
VPS51-212ENST00000533656 ZNF804BA4D1E1 1349 aa26.94■■□□□ 1.9
VPS51-212ENST00000533656 GLTPD2A6NH11 291 aa26.94■■□□□ 1.9
VPS51-212ENST00000533656 APLP1P51693 650 aa26.94■■□□□ 1.9
VPS51-212ENST00000533656 PUM3Q15397 648 aaKnown RBP26.94■■□□□ 1.9
VPS51-212ENST00000533656 RWDD1Q9H446 243 aaPredicted RBP26.94■■□□□ 1.9
VPS51-212ENST00000533656 POLLQ9UGP5 575 aa26.94■■□□□ 1.9
VPS51-212ENST00000533656 TAF5LO75529 589 aa26.93■■□□□ 1.9
VPS51-212ENST00000533656 HELBQ8NG08 1087 aaPredicted RBP26.93■■□□□ 1.9
VPS51-212ENST00000533656 DCTPP1Q9H773 170 aa26.93■■□□□ 1.9
VPS51-212ENST00000533656 AKAP2Q9Y2D5 859 aa26.93■■□□□ 1.9
VPS51-212ENST00000533656 MED23Q9ULK4 1368 aa26.93■■□□□ 1.9
VPS51-212ENST00000533656 HTRA3P83110 453 aa26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms