RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 CPB1P15086 417 aa5.03□□□□□ -1.6
ATM-220ENST00000533526 HOXB4P17483 251 aaPredicted RBP5.03□□□□□ -1.6
ATM-220ENST00000533526 SNRPNP63162 240 aaKnown RBP5.03□□□□□ -1.6
ATM-220ENST00000533526 PSAPL1Q6NUJ1 521 aa5.03□□□□□ -1.6
ATM-220ENST00000533526 AEBP1Q8IUX7 1158 aa5.03□□□□□ -1.6
ATM-220ENST00000533526 CACTIN-AS1Q8N1I8 211 aa5.03□□□□□ -1.6
ATM-220ENST00000533526 STARD13Q9Y3M8 1113 aa5.03□□□□□ -1.6
ATM-220ENST00000533526 TNFRSF21O75509 655 aa5.02□□□□□ -1.61
ATM-220ENST00000533526 ALBP02768 609 aa5.02□□□□□ -1.61
ATM-220ENST00000533526 CES1P23141 567 aa5.02□□□□□ -1.61
ATM-220ENST00000533526 HOMEZQ8IX15 550 aa5.02□□□□□ -1.61
ATM-220ENST00000533526 TMC1Q8TDI8 760 aa5.02□□□□□ -1.61
ATM-220ENST00000533526 SNX29Q8TEQ0 813 aa5.02□□□□□ -1.61
ATM-220ENST00000533526 NUDT8Q8WV74 236 aa5.02□□□□□ -1.61
ATM-220ENST00000533526 RBCK1Q9BYM8 510 aa5.02□□□□□ -1.61
ATM-220ENST00000533526 JPH1Q9HDC5 661 aaPredicted RBP5.02□□□□□ -1.61
ATM-220ENST00000533526 TMEM63CQ9P1W3 806 aa5.02□□□□□ -1.61
ATM-220ENST00000533526 DCTN4Q9UJW0 460 aa5.02□□□□□ -1.61
ATM-220ENST00000533526 PHACTR2O75167 634 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 KIF4AO95239 1232 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 EIF2AK2P19525 551 aaKnown RBP5.01□□□□□ -1.61
ATM-220ENST00000533526 IRS1P35568 1242 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 MLLT1Q03111 559 aaPredicted RBP5.01□□□□□ -1.61
ATM-220ENST00000533526 PERM1Q5SV97 790 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 HFE2Q6ZVN8 426 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 NCAPG2Q86XI2 1143 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 C1orf127Q8N9H9 656 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 PLD4Q96BZ4 506 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 DMRTB1Q96MA1 342 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 NSUN5Q96P11 429 aaKnown RBP5.01□□□□□ -1.61
ATM-220ENST00000533526 LPIN3Q9BQK8 851 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 CNTN3Q9P232 1028 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 SALL4Q9UJQ4 1053 aa5.01□□□□□ -1.61
ATM-220ENST00000533526 A6NHS1 94 aa5□□□□□ -1.61
ATM-220ENST00000533526 J3QW42 95 aa5□□□□□ -1.61
ATM-220ENST00000533526 EDN3P14138 238 aa5□□□□□ -1.61
ATM-220ENST00000533526 FAM129BQ96TA1 746 aa5□□□□□ -1.61
ATM-220ENST00000533526 PLVAPQ9BX97 442 aa5□□□□□ -1.61
ATM-220ENST00000533526 SMG9Q9H0W8 520 aaKnown RBP5□□□□□ -1.61
ATM-220ENST00000533526 ZFYVE28Q9HCC9 887 aa5□□□□□ -1.61
ATM-220ENST00000533526 SMNDC1O75940 238 aaKnown RBP eCLIP4.99□□□□□ -1.61
ATM-220ENST00000533526 CYP2E1P05181 493 aaPredicted RBP4.99□□□□□ -1.61
ATM-220ENST00000533526 NID1P14543 1247 aa4.99□□□□□ -1.61
ATM-220ENST00000533526 AFF1P51825 1210 aaKnown RBP4.99□□□□□ -1.61
ATM-220ENST00000533526 RASSF7Q02833 373 aa4.99□□□□□ -1.61
ATM-220ENST00000533526 TRIM28Q13263 835 aaKnown RBP4.99□□□□□ -1.61
ATM-220ENST00000533526 COL9A3Q14050 684 aaPredicted RBP4.99□□□□□ -1.61
ATM-220ENST00000533526 PRRT3Q5FWE3 981 aa4.99□□□□□ -1.61
ATM-220ENST00000533526 TRAPPC3LQ5T215 181 aa4.99□□□□□ -1.61
ATM-220ENST00000533526 ZSCAN29Q8IWY8 852 aaPredicted RBP4.99□□□□□ -1.61
ATM-220ENST00000533526 CEP120Q8N960 986 aa4.99□□□□□ -1.61
ATM-220ENST00000533526 ALKBH8Q96BT7 664 aaKnown RBP4.99□□□□□ -1.61
ATM-220ENST00000533526 MUC3BQ9H195 1237 aa4.99□□□□□ -1.61
ATM-220ENST00000533526 DNAJC25Q9H1X3 360 aa4.99□□□□□ -1.61
ATM-220ENST00000533526 NAGPAQ9UK23 515 aa4.99□□□□□ -1.61
ATM-220ENST00000533526 FAM177BA6PVY3 158 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 GDF11O95390 407 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 MAPK1P28482 360 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 PLCB3Q01970 1234 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 COL13A1Q5TAT6 717 aaPredicted RBP4.98□□□□□ -1.61
ATM-220ENST00000533526 MSL1Q68DK7 614 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 C8orf86Q6ZUL3 223 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 TMEM151AQ8N4L1 468 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 DTWD1Q8N5C7 304 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 TRIM11Q96F44 468 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 PBX4Q9BYU1 374 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 CHRDQ9H2X0 955 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 AMOTL2Q9Y2J4 779 aa4.98□□□□□ -1.61
ATM-220ENST00000533526 EREGO14944 169 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 CPNE3O75131 537 aaKnown RBP4.97□□□□□ -1.61
ATM-220ENST00000533526 SPATA31C1P0DKV0 1188 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 RAC1P63000 192 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 GRIK5Q16478 980 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 CEP135Q66GS9 1140 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 ILDR2Q71H61 639 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 WFDC8Q8IUA0 241 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 DCAF11Q8TEB1 546 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 NIF3L1Q9GZT8 377 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 SUV39H2Q9H5I1 410 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 SRA1Q9HD15 236 aaKnown RBP4.97□□□□□ -1.61
ATM-220ENST00000533526 KANSL3Q9P2N6 904 aa4.97□□□□□ -1.61
ATM-220ENST00000533526 FOXD3Q9UJU5 478 aaPredicted RBP4.97□□□□□ -1.61
ATM-220ENST00000533526 IGHA2P01877 340 aa4.96□□□□□ -1.62
ATM-220ENST00000533526 GSK3AP49840 483 aa4.96□□□□□ -1.62
ATM-220ENST00000533526 SND1Q7KZF4 910 aaKnown RBP eCLIP4.96□□□□□ -1.62
ATM-220ENST00000533526 TMC7Q7Z402 723 aa4.96□□□□□ -1.62
ATM-220ENST00000533526 MAP4K3Q8IVH8 894 aa4.96□□□□□ -1.62
ATM-220ENST00000533526 GALNT12Q8IXK2 581 aa4.96□□□□□ -1.62
ATM-220ENST00000533526 DMRTC2Q8IXT2 367 aaPredicted RBP4.96□□□□□ -1.62
ATM-220ENST00000533526 IL22RA1Q8N6P7 574 aa4.96□□□□□ -1.62
ATM-220ENST00000533526 DCAF5Q96JK2 942 aa4.96□□□□□ -1.62
ATM-220ENST00000533526 NACC1Q96RE7 527 aa4.96□□□□□ -1.62
ATM-220ENST00000533526 RASSF4Q9H2L5 321 aa4.96□□□□□ -1.62
ATM-220ENST00000533526 A0A0A0MRY4 1105 aa4.95□□□□□ -1.62
ATM-220ENST00000533526 PTPRAP18433 802 aa4.95□□□□□ -1.62
ATM-220ENST00000533526 COL8A1P27658 744 aa4.95□□□□□ -1.62
ATM-220ENST00000533526 GDF6Q6KF10 455 aaPredicted RBP4.95□□□□□ -1.62
ATM-220ENST00000533526 TMEM102Q8N9M5 508 aaPredicted RBP4.95□□□□□ -1.62
ATM-220ENST00000533526 ASB16Q96NS5 453 aa4.95□□□□□ -1.62
ATM-220ENST00000533526 POP1Q99575 1024 aaKnown RBP4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms