RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 TMA7Q9Y2S6 64 aaKnown RBP6.47□□□□□ -1.37
CKAP5-212ENST00000533413 PCDH11XQ9BZA7 1347 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 PCDH11YQ9BZA8 1340 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 ZNF831Q5JPB2 1677 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 KDRP35968 1356 aa6.47□□□□□ -1.37
CKAP5-212ENST00000533413 CCDC144BQ3MJ40 725 aa6.46□□□□□ -1.37
CKAP5-212ENST00000533413 HSP90AB2PQ58FF8 381 aa6.46□□□□□ -1.37
CKAP5-212ENST00000533413 ANKRD23Q86SG2 305 aa6.46□□□□□ -1.37
CKAP5-212ENST00000533413 STAG1Q8WVM7 1258 aa6.46□□□□□ -1.37
CKAP5-212ENST00000533413 CALR3Q96L12 384 aaKnown RBP6.46□□□□□ -1.37
CKAP5-212ENST00000533413 TRIM35Q9UPQ4 493 aa6.46□□□□□ -1.37
CKAP5-212ENST00000533413 BTAF1O14981 1849 aa6.46□□□□□ -1.37
CKAP5-212ENST00000533413 ADAMTS7Q9UKP4 1686 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 QSER1Q2KHR3 1735 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 NUP188Q5SRE5 1749 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 EIF4A2Q14240 407 aaKnown RBP6.46□□□□□ -1.38
CKAP5-212ENST00000533413 LY75O60449 1722 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 DIAPH1O60610 1272 aaKnown RBP6.46□□□□□ -1.38
CKAP5-212ENST00000533413 CDC45O75419 566 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 ZRANB2O95218 330 aaKnown RBP eCLIP6.46□□□□□ -1.38
CKAP5-212ENST00000533413 RECKO95980 971 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 USP5P45974 858 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 NUCB2P80303 420 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 ICE2Q659A1 982 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 FMNL3Q8IVF7 1028 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 PARP9Q8IXQ6 854 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 SPG7Q9UQ90 795 aa6.46□□□□□ -1.38
CKAP5-212ENST00000533413 ITGB4P16144 1822 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 KLHL40Q2TBA0 621 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 AMOTQ4VCS5 1084 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 NBPF6Q5VWK0 638 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 TBC1D9Q6ZT07 1266 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 NBPF5PQ86XG9 351 aaPredicted RBP6.45□□□□□ -1.38
CKAP5-212ENST00000533413 NBPF4Q96M43 638 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 YY1AP1Q9H869 796 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 CICQ96RK0 1608 aaPredicted RBP6.45□□□□□ -1.38
CKAP5-212ENST00000533413 SCN11AQ9UI33 1791 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 TOGARAM1Q9Y4F4 1720 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 TLDC2A0PJX2 215 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 BAG4O95429 457 aaKnown RBP6.45□□□□□ -1.38
CKAP5-212ENST00000533413 PRR29P0C7W0 189 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 COPB2P35606 906 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 SDE2Q6IQ49 451 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 GPIHBP1Q8IV16 184 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 PDILTQ8N807 584 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 LTV1Q96GA3 475 aaPredicted RBP6.45□□□□□ -1.38
CKAP5-212ENST00000533413 DDX27Q96GQ7 796 aaKnown RBP6.45□□□□□ -1.38
CKAP5-212ENST00000533413 PLEKHF1Q96S99 279 aa6.45□□□□□ -1.38
CKAP5-212ENST00000533413 INO80BQ9C086 356 aaPredicted RBP6.45□□□□□ -1.38
CKAP5-212ENST00000533413 DYTNA2CJ06 578 aa6.44□□□□□ -1.38
CKAP5-212ENST00000533413 EIF3JO75822 258 aaKnown RBP6.44□□□□□ -1.38
CKAP5-212ENST00000533413 IL13P35225 146 aa6.44□□□□□ -1.38
CKAP5-212ENST00000533413 GTF2F1P35269 517 aaKnown RBP eCLIP6.44□□□□□ -1.38
CKAP5-212ENST00000533413 BAG6P46379 1132 aa6.44□□□□□ -1.38
CKAP5-212ENST00000533413 RABEP1Q15276 862 aa6.44□□□□□ -1.38
CKAP5-212ENST00000533413 MCTP1Q6DN14 999 aa6.44□□□□□ -1.38
CKAP5-212ENST00000533413 RPUSD2Q8IZ73 545 aaKnown RBP6.44□□□□□ -1.38
CKAP5-212ENST00000533413 GAS2L2Q8NHY3 880 aa6.44□□□□□ -1.38
CKAP5-212ENST00000533413 EYA1Q99502 592 aa6.44□□□□□ -1.38
CKAP5-212ENST00000533413 RBM42Q9BTD8 480 aaKnown RBP6.44□□□□□ -1.38
CKAP5-212ENST00000533413 DMGDHQ9UI17 866 aaKnown RBP6.44□□□□□ -1.38
CKAP5-212ENST00000533413 MAP2K1Q02750 393 aaPredicted RBP6.44□□□□□ -1.38
CKAP5-212ENST00000533413 PDAP1Q13442 181 aaKnown RBP6.44□□□□□ -1.38
CKAP5-212ENST00000533413 SETDB1Q15047 1291 aa6.44□□□□□ -1.38
CKAP5-212ENST00000533413 SF3A1Q15459 793 aaKnown RBP6.44□□□□□ -1.38
CKAP5-212ENST00000533413 MYCBPQ99417 103 aaPredicted RBP6.44□□□□□ -1.38
CKAP5-212ENST00000533413 PAGR1Q9BTK6 254 aa6.44□□□□□ -1.38
CKAP5-212ENST00000533413 SFMBT1Q9UHJ3 866 aa6.44□□□□□ -1.38
CKAP5-212ENST00000533413 PAPPAQ13219 1627 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 TULP2O00295 520 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 ZBTB7BO15156 539 aaPredicted RBP6.43□□□□□ -1.38
CKAP5-212ENST00000533413 TSNAXIP1Q2TAA8 658 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 PLEKHO1Q53GL0 409 aaPredicted RBP6.43□□□□□ -1.38
CKAP5-212ENST00000533413 CAVIN1Q6NZI2 390 aaKnown RBP6.43□□□□□ -1.38
CKAP5-212ENST00000533413 MARCH10Q8NA82 808 aaPredicted RBP6.43□□□□□ -1.38
CKAP5-212ENST00000533413 GLMNQ92990 594 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 MPHOSPH6Q99547 160 aaKnown RBP6.43□□□□□ -1.38
CKAP5-212ENST00000533413 KIF2CQ99661 725 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 EIF2AK3Q9NZJ5 1116 aaKnown RBP6.43□□□□□ -1.38
CKAP5-212ENST00000533413 TBC1D12O60347 775 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 FCHSD2O94868 740 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 CD2BP2O95400 341 aaKnown RBP6.43□□□□□ -1.38
CKAP5-212ENST00000533413 FBLN1P23142 703 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 MCM5P33992 734 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 NBPF10Q6P3W6 841 aaKnown RBP6.43□□□□□ -1.38
CKAP5-212ENST00000533413 ARHGAP45Q92619 1136 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 ZNF512BQ96KM6 892 aaPredicted RBP6.43□□□□□ -1.38
CKAP5-212ENST00000533413 TANGO6Q9C0B7 1094 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 NOL7Q9UMY1 257 aaKnown RBP6.43□□□□□ -1.38
CKAP5-212ENST00000533413 MRC1P22897 1456 aa6.43□□□□□ -1.38
CKAP5-212ENST00000533413 ST18O60284 1047 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 RRM1P23921 792 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 MLLT3P42568 568 aaPredicted RBP6.42□□□□□ -1.38
CKAP5-212ENST00000533413 ZRSR2Q15696 482 aaKnown RBP6.42□□□□□ -1.38
CKAP5-212ENST00000533413 ENOX2Q16206 610 aaKnown RBP6.42□□□□□ -1.38
CKAP5-212ENST00000533413 PLEKHG6Q3KR16 790 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 CLEC17AQ6ZS10 378 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 TTC30AQ86WT1 665 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 BORCS6Q96GS4 357 aa6.42□□□□□ -1.38
CKAP5-212ENST00000533413 API5Q9BZZ5 524 aaKnown RBP6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms