RNA–Protein interactions for RNA: ENST00000533145.5

HIF3A-215, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 4

Gene HIF3A, Length 573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-215ENST00000533145 SMARCA5O60264 1052 aaPredicted RBP17.38■□□□□ 0.37
HIF3A-215ENST00000533145 STYK1Q6J9G0 422 aa17.38■□□□□ 0.37
HIF3A-215ENST00000533145 TMC4Q7Z404 712 aa17.38■□□□□ 0.37
HIF3A-215ENST00000533145 CLASRPQ8N2M8 674 aaKnown RBP17.38■□□□□ 0.37
HIF3A-215ENST00000533145 SPON1Q9HCB6 807 aa17.38■□□□□ 0.37
HIF3A-215ENST00000533145 APBB1O00213 710 aa17.37■□□□□ 0.37
HIF3A-215ENST00000533145 PDE4AP27815 886 aa17.37■□□□□ 0.37
HIF3A-215ENST00000533145 TGFB2P61812 414 aa17.37■□□□□ 0.37
HIF3A-215ENST00000533145 TFCP2Q12800 502 aa17.37■□□□□ 0.37
HIF3A-215ENST00000533145 VGLL2Q8N8G2 317 aa17.37■□□□□ 0.37
HIF3A-215ENST00000533145 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.37■□□□□ 0.37
HIF3A-215ENST00000533145 KIAA1551Q9HCM1 1747 aa17.36■□□□□ 0.37
HIF3A-215ENST00000533145 C2CD5Q86YS7 1000 aa17.36■□□□□ 0.37
HIF3A-215ENST00000533145 IL1RAPL2Q9NP60 686 aa17.36■□□□□ 0.37
HIF3A-215ENST00000533145 MINPP1Q9UNW1 487 aa17.36■□□□□ 0.37
HIF3A-215ENST00000533145 AKAP2Q9Y2D5 859 aa17.36■□□□□ 0.37
HIF3A-215ENST00000533145 CD2APQ9Y5K6 639 aa17.36■□□□□ 0.37
HIF3A-215ENST00000533145 SALL3Q9BXA9 1300 aa17.36■□□□□ 0.37
HIF3A-215ENST00000533145 PDE8BO95263 885 aa17.35■□□□□ 0.37
HIF3A-215ENST00000533145 YY1P25490 414 aa17.35■□□□□ 0.37
HIF3A-215ENST00000533145 METTL24Q5JXM2 366 aa17.35■□□□□ 0.37
HIF3A-215ENST00000533145 EAF2Q96CJ1 260 aaPredicted RBP17.35■□□□□ 0.37
HIF3A-215ENST00000533145 LRRC37AA6NMS7 1700 aa17.35■□□□□ 0.37
HIF3A-215ENST00000533145 CHRNDQ07001 517 aa17.34■□□□□ 0.37
HIF3A-215ENST00000533145 TNNI3KQ59H18 835 aa17.34■□□□□ 0.37
HIF3A-215ENST00000533145 SP8Q8IXZ3 490 aa17.34■□□□□ 0.37
HIF3A-215ENST00000533145 C16orf71Q8IYS4 520 aaPredicted RBP17.34■□□□□ 0.37
HIF3A-215ENST00000533145 CNKSR1Q969H4 720 aa17.34■□□□□ 0.37
HIF3A-215ENST00000533145 ANKRD2Q9GZV1 360 aa17.34■□□□□ 0.37
HIF3A-215ENST00000533145 OSBPL3Q9H4L5 887 aa17.34■□□□□ 0.37
HIF3A-215ENST00000533145 FPGT-TNNI3KV9GXZ4 949 aa17.34■□□□□ 0.37
HIF3A-215ENST00000533145 CACNA1SQ13698 1873 aa17.33■□□□□ 0.37
HIF3A-215ENST00000533145 FGFR2P21802 821 aa17.33■□□□□ 0.36
HIF3A-215ENST00000533145 KCNA3P22001 575 aa17.33■□□□□ 0.36
HIF3A-215ENST00000533145 PLEKHM2Q8IWE5 1019 aa17.33■□□□□ 0.36
HIF3A-215ENST00000533145 STAP2Q9UGK3 403 aa17.33■□□□□ 0.36
HIF3A-215ENST00000533145 SLX4Q8IY92 1834 aa17.33■□□□□ 0.36
HIF3A-215ENST00000533145 CHRNA5P30532 468 aa17.32■□□□□ 0.36
HIF3A-215ENST00000533145 UBE4AQ14139 1066 aa17.32■□□□□ 0.36
HIF3A-215ENST00000533145 ZNF622Q969S3 477 aaKnown RBP eCLIP17.32■□□□□ 0.36
HIF3A-215ENST00000533145 BRCA1P38398 1863 aaKnown RBP17.32■□□□□ 0.36
HIF3A-215ENST00000533145 ZNF609O15014 1411 aa17.31■□□□□ 0.36
HIF3A-215ENST00000533145 ARAP2Q8WZ64 1704 aa17.31■□□□□ 0.36
HIF3A-215ENST00000533145 A0A1B0GUL7 405 aa17.31■□□□□ 0.36
HIF3A-215ENST00000533145 IFIT2P09913 472 aaKnown RBP17.31■□□□□ 0.36
HIF3A-215ENST00000533145 AACSQ86V21 672 aa17.31■□□□□ 0.36
HIF3A-215ENST00000533145 LPIN2Q92539 896 aa17.31■□□□□ 0.36
HIF3A-215ENST00000533145 PODXL2Q9NZ53 605 aa17.31■□□□□ 0.36
HIF3A-215ENST00000533145 ATP6V0A2Q9Y487 856 aa17.31■□□□□ 0.36
HIF3A-215ENST00000533145 AOX1Q06278 1338 aa17.3■□□□□ 0.36
HIF3A-215ENST00000533145 TTC41PQ6P2S7 1318 aa17.3■□□□□ 0.36
HIF3A-215ENST00000533145 PPEF1O14829 653 aaPredicted RBP17.3■□□□□ 0.36
HIF3A-215ENST00000533145 DPEP1P16444 411 aa17.3■□□□□ 0.36
HIF3A-215ENST00000533145 PDE1AP54750 535 aa17.3■□□□□ 0.36
HIF3A-215ENST00000533145 TIMM10P62072 90 aa17.3■□□□□ 0.36
HIF3A-215ENST00000533145 PUM3Q15397 648 aaKnown RBP17.3■□□□□ 0.36
HIF3A-215ENST00000533145 ATP2B3Q16720 1220 aa17.3■□□□□ 0.36
HIF3A-215ENST00000533145 SKAP1Q86WV1 359 aa17.3■□□□□ 0.36
HIF3A-215ENST00000533145 HELBQ8NG08 1087 aaPredicted RBP17.3■□□□□ 0.36
HIF3A-215ENST00000533145 CCDC8Q9H0W5 538 aaPredicted RBP17.3■□□□□ 0.36
HIF3A-215ENST00000533145 LEMD3Q9Y2U8 911 aa17.3■□□□□ 0.36
HIF3A-215ENST00000533145 LTBP1Q14766 1721 aa17.3■□□□□ 0.36
HIF3A-215ENST00000533145 TAF5LO75529 589 aa17.29■□□□□ 0.36
HIF3A-215ENST00000533145 MX1P20591 662 aa17.29■□□□□ 0.36
HIF3A-215ENST00000533145 RGS3P49796 1198 aa17.29■□□□□ 0.36
HIF3A-215ENST00000533145 CC2D2BQ6DHV5 1058 aa17.29■□□□□ 0.36
HIF3A-215ENST00000533145 TTLL6Q8N841 843 aa17.29■□□□□ 0.36
HIF3A-215ENST00000533145 OTUD7AQ8TE49 926 aaPredicted RBP17.29■□□□□ 0.36
HIF3A-215ENST00000533145 C7orf43Q8WVR3 580 aa17.29■□□□□ 0.36
HIF3A-215ENST00000533145 DBNLQ9UJU6 430 aaKnown RBP17.29■□□□□ 0.36
HIF3A-215ENST00000533145 XDHP47989 1333 aa17.28■□□□□ 0.36
HIF3A-215ENST00000533145 A0A0G2JLW4 131 aa17.28■□□□□ 0.36
HIF3A-215ENST00000533145 SLC5A1P13866 664 aa17.28■□□□□ 0.36
HIF3A-215ENST00000533145 PRPF40BQ6NWY9 871 aaKnown RBP17.28■□□□□ 0.36
HIF3A-215ENST00000533145 ZBTB22O15209 634 aa17.27■□□□□ 0.36
HIF3A-215ENST00000533145 IFIT1P09914 478 aaKnown RBP17.27■□□□□ 0.36
HIF3A-215ENST00000533145 ATP2B4P23634 1241 aa17.27■□□□□ 0.36
HIF3A-215ENST00000533145 GRIPAP1Q4V328 841 aa17.27■□□□□ 0.36
HIF3A-215ENST00000533145 C15orf52Q6ZUT6 534 aaKnown RBP17.27■□□□□ 0.36
HIF3A-215ENST00000533145 XAGE2Q96GT9 111 aa17.27■□□□□ 0.36
HIF3A-215ENST00000533145 GPATCH3Q96I76 525 aa17.27■□□□□ 0.36
HIF3A-215ENST00000533145 NEUROD6Q96NK8 337 aa17.27■□□□□ 0.36
HIF3A-215ENST00000533145 DBNDD2Q9BQY9 259 aa17.27■□□□□ 0.36
HIF3A-215ENST00000533145 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
HIF3A-215ENST00000533145 PIM2Q9P1W9 311 aa17.27■□□□□ 0.36
HIF3A-215ENST00000533145 GPSM2P81274 684 aa17.26■□□□□ 0.35
HIF3A-215ENST00000533145 ZNF512BQ96KM6 892 aaPredicted RBP17.26■□□□□ 0.35
HIF3A-215ENST00000533145 TLR7Q9NYK1 1049 aaKnown RBP17.26■□□□□ 0.35
HIF3A-215ENST00000533145 ZNF804BA4D1E1 1349 aa17.25■□□□□ 0.35
HIF3A-215ENST00000533145 ERC2O15083 957 aa17.25■□□□□ 0.35
HIF3A-215ENST00000533145 ATP5JP18859 108 aa17.25■□□□□ 0.35
HIF3A-215ENST00000533145 PI4K2BQ8TCG2 481 aa17.25■□□□□ 0.35
HIF3A-215ENST00000533145 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.25■□□□□ 0.35
HIF3A-215ENST00000533145 TMX4Q9H1E5 349 aaPredicted RBP17.25■□□□□ 0.35
HIF3A-215ENST00000533145 ANKIB1Q9P2G1 1089 aa17.25■□□□□ 0.35
HIF3A-215ENST00000533145 NSFL1CQ9UNZ2 370 aaKnown RBP17.25■□□□□ 0.35
HIF3A-215ENST00000533145 IRS2Q9Y4H2 1338 aa17.24■□□□□ 0.35
HIF3A-215ENST00000533145 SNED1Q8TER0 1413 aa17.24■□□□□ 0.35
HIF3A-215ENST00000533145 SNAP23O00161 211 aa17.24■□□□□ 0.35
HIF3A-215ENST00000533145 GLRX3O76003 335 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms